RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TCP10Q12799 353 aa16.75■□□□□ 0.27
CD4-208ENST00000538827 NFIAQ12857 509 aa16.75■□□□□ 0.27
CD4-208ENST00000538827 RRP12Q5JTH9 1297 aaKnown RBP16.75■□□□□ 0.27
CD4-208ENST00000538827 SAMD7Q7Z3H4 446 aa16.75■□□□□ 0.27
CD4-208ENST00000538827 NEK1Q96PY6 1258 aa16.75■□□□□ 0.27
CD4-208ENST00000538827 OSBPL5Q9H0X9 879 aaPredicted RBP16.75■□□□□ 0.27
CD4-208ENST00000538827 GPRC5DQ9NZD1 345 aa16.75■□□□□ 0.27
CD4-208ENST00000538827 ZNF70Q9UC06 446 aaPredicted RBP16.75■□□□□ 0.27
CD4-208ENST00000538827 CYP46A1Q9Y6A2 500 aa16.75■□□□□ 0.27
CD4-208ENST00000538827 SIPA1L1O43166 1804 aa16.75■□□□□ 0.27
CD4-208ENST00000538827 TCP10L2B9ZVM9 353 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 ST18O60284 1047 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 SLC3A2P08195 630 aaKnown RBP16.74■□□□□ 0.27
CD4-208ENST00000538827 ECE1P42892 770 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 MMP14P50281 582 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 EVX2Q03828 476 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 TRDNQ13061 729 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 TSGA10IPQ3SY00 556 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 SPDYE2Q495Y8 402 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 SBK1Q52WX2 424 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 NOL8Q76FK4 1167 aaKnown RBP16.74■□□□□ 0.27
CD4-208ENST00000538827 PNMA8AQ86V59 439 aaPredicted RBP16.74■□□□□ 0.27
CD4-208ENST00000538827 HSCBQ8IWL3 235 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 ZSCAN29Q8IWY8 852 aaPredicted RBP16.74■□□□□ 0.27
CD4-208ENST00000538827 MTMR14Q8NCE2 650 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 IL17RAQ96F46 866 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 TCEANC2Q96MN5 208 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 RNF41Q9H4P4 317 aaPredicted RBP16.74■□□□□ 0.27
CD4-208ENST00000538827 CLEC11AQ9Y240 323 aa16.74■□□□□ 0.27
CD4-208ENST00000538827 SMIM22K7EJ46 135 aa16.73■□□□□ 0.27
CD4-208ENST00000538827 EGFRP00533 1210 aa16.73■□□□□ 0.27
CD4-208ENST00000538827 HLA-DOAP06340 250 aa16.73■□□□□ 0.27
CD4-208ENST00000538827 NBPF9Q3BBW0 867 aa16.73■□□□□ 0.27
CD4-208ENST00000538827 EAPPQ56P03 285 aaPredicted RBP16.73■□□□□ 0.27
CD4-208ENST00000538827 AKNAD1Q5T1N1 836 aa16.73■□□□□ 0.27
CD4-208ENST00000538827 MFSD6Q6ZSS7 791 aa16.73■□□□□ 0.27
CD4-208ENST00000538827 NCOA7Q8NI08 942 aa16.73■□□□□ 0.27
CD4-208ENST00000538827 STAG1Q8WVM7 1258 aa16.73■□□□□ 0.27
CD4-208ENST00000538827 IDI2Q9BXS1 227 aa16.73■□□□□ 0.27
CD4-208ENST00000538827 TM6SF1Q9BZW5 370 aa16.73■□□□□ 0.27
CD4-208ENST00000538827 HACL1Q9UJ83 578 aa16.73■□□□□ 0.27
CD4-208ENST00000538827 ABT1Q9ULW3 272 aaKnown RBP16.73■□□□□ 0.27
CD4-208ENST00000538827 ROBO3Q96MS0 1386 aa16.73■□□□□ 0.27
CD4-208ENST00000538827 B4E1Z4 1266 aa16.72■□□□□ 0.27
CD4-208ENST00000538827 WNT10BO00744 389 aa16.72■□□□□ 0.27
CD4-208ENST00000538827 RPS6KB1P23443 525 aa16.72■□□□□ 0.27
CD4-208ENST00000538827 EPS15P42566 896 aa16.72■□□□□ 0.27
CD4-208ENST00000538827 C12orf60Q5U649 245 aa16.72■□□□□ 0.27
CD4-208ENST00000538827 RUFY3Q7L099 469 aa16.72■□□□□ 0.27
CD4-208ENST00000538827 TRPM4Q8TD43 1214 aa16.72■□□□□ 0.27
CD4-208ENST00000538827 ZBED3Q96IU2 234 aaPredicted RBP16.72■□□□□ 0.27
CD4-208ENST00000538827 ZSWIM6Q9HCJ5 1215 aa16.72■□□□□ 0.27
CD4-208ENST00000538827 PDRG1Q9NUG6 133 aa16.72■□□□□ 0.27
CD4-208ENST00000538827 FAM198AQ9UFP1 575 aa16.72■□□□□ 0.27
CD4-208ENST00000538827 ANAPC4Q9UJX5 808 aa16.72■□□□□ 0.27
CD4-208ENST00000538827 HMGB1P09429 215 aaKnown RBP16.71■□□□□ 0.27
CD4-208ENST00000538827 PDE4BQ07343 736 aa16.71■□□□□ 0.27
CD4-208ENST00000538827 BECN1Q14457 450 aa16.71■□□□□ 0.27
CD4-208ENST00000538827 TTC6Q86TZ1 520 aa16.71■□□□□ 0.27
CD4-208ENST00000538827 DYNLL2Q96FJ2 89 aa16.71■□□□□ 0.27
CD4-208ENST00000538827 KRT23Q9C075 422 aa16.71■□□□□ 0.27
CD4-208ENST00000538827 CNNM2Q9H8M5 875 aa16.71■□□□□ 0.27
CD4-208ENST00000538827 INCENPQ9NQS7 918 aa16.71■□□□□ 0.27
CD4-208ENST00000538827 TACC3Q9Y6A5 838 aa16.71■□□□□ 0.27
CD4-208ENST00000538827 TNRC18O15417 2968 aaPredicted RBP16.71■□□□□ 0.26
CD4-208ENST00000538827 ASTN2O75129 1339 aaPredicted RBP16.7■□□□□ 0.26
CD4-208ENST00000538827 COL2A1P02458 1487 aaPredicted RBP16.7■□□□□ 0.26
CD4-208ENST00000538827 CA12O43570 354 aa16.7■□□□□ 0.26
CD4-208ENST00000538827 ENTPD3O75355 529 aa16.7■□□□□ 0.26
CD4-208ENST00000538827 PRDM1O75626 825 aa16.7■□□□□ 0.26
CD4-208ENST00000538827 EPHX2P34913 555 aa16.7■□□□□ 0.26
CD4-208ENST00000538827 PLCD1P51178 756 aa16.7■□□□□ 0.26
CD4-208ENST00000538827 FGD1P98174 961 aa16.7■□□□□ 0.26
CD4-208ENST00000538827 COL9A3Q14050 684 aaPredicted RBP16.7■□□□□ 0.26
CD4-208ENST00000538827 CHST3Q7LGC8 479 aa16.7■□□□□ 0.26
CD4-208ENST00000538827 ZFPM1Q8IX07 1006 aa16.7■□□□□ 0.26
CD4-208ENST00000538827 MB21D2Q8IYB1 491 aaPredicted RBP16.7■□□□□ 0.26
CD4-208ENST00000538827 TRIM34Q9BYJ4 488 aa16.7■□□□□ 0.26
CD4-208ENST00000538827 LRRC2Q9BYS8 371 aa16.7■□□□□ 0.26
CD4-208ENST00000538827 MCOLN1Q9GZU1 580 aa16.7■□□□□ 0.26
CD4-208ENST00000538827 PRC1O43663 620 aa16.69■□□□□ 0.26
CD4-208ENST00000538827 KDM4AO75164 1064 aa16.69■□□□□ 0.26
CD4-208ENST00000538827 CD2BP2O95400 341 aaKnown RBP16.69■□□□□ 0.26
CD4-208ENST00000538827 TNNI2P48788 182 aa16.69■□□□□ 0.26
CD4-208ENST00000538827 AK2P54819 239 aa16.69■□□□□ 0.26
CD4-208ENST00000538827 CRACR2BQ8N4Y2 399 aaPredicted RBP16.69■□□□□ 0.26
CD4-208ENST00000538827 SLC44A5Q8NCS7 719 aa16.69■□□□□ 0.26
CD4-208ENST00000538827 CAPNS2Q96L46 248 aa16.69■□□□□ 0.26
CD4-208ENST00000538827 DAXXQ9UER7 740 aaPredicted RBP16.69■□□□□ 0.26
CD4-208ENST00000538827 RANBP6O60518 1105 aaKnown RBP16.68■□□□□ 0.26
CD4-208ENST00000538827 NPM3O75607 178 aaKnown RBP16.68■□□□□ 0.26
CD4-208ENST00000538827 PCP11498 1178 aaKnown RBP16.68■□□□□ 0.26
CD4-208ENST00000538827 MCM5P33992 734 aa16.68■□□□□ 0.26
CD4-208ENST00000538827 MAP2K2P36507 400 aa16.68■□□□□ 0.26
CD4-208ENST00000538827 Q6ZUG5 572 aa16.68■□□□□ 0.26
CD4-208ENST00000538827 CYB5R4Q7L1T6 521 aa16.68■□□□□ 0.26
CD4-208ENST00000538827 DHX32Q7L7V1 743 aaKnown RBP16.68■□□□□ 0.26
CD4-208ENST00000538827 ESR2Q92731 530 aa16.68■□□□□ 0.26
CD4-208ENST00000538827 MKNK2Q9HBH9 465 aa16.68■□□□□ 0.26
CD4-208ENST00000538827 ADARB2Q9NS39 739 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms