RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 SSRP1Q08945 709 aaKnown RBP17.24■□□□□ 0.35
ATL3-203ENST00000538786 PPP2R5BQ15173 497 aa17.24■□□□□ 0.35
ATL3-203ENST00000538786 ENAHQ8N8S7 591 aaPredicted RBP17.24■□□□□ 0.35
ATL3-203ENST00000538786 SH3RF3Q8TEJ3 882 aaPredicted RBP17.24■□□□□ 0.35
ATL3-203ENST00000538786 USP28Q96RU2 1077 aa17.24■□□□□ 0.35
ATL3-203ENST00000538786 PRDM1O75626 825 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 USP5P45974 858 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 NT5C2P49902 561 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 FANCBQ8NB91 859 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 WASF1Q92558 559 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 ANP32BQ92688 251 aaKnown RBP17.23■□□□□ 0.35
ATL3-203ENST00000538786 MASTLQ96GX5 879 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 RTFDC1Q9BY42 306 aaPredicted RBP17.23■□□□□ 0.35
ATL3-203ENST00000538786 MCM9Q9NXL9 1143 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 LIG1P18858 919 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 KIF23Q02241 960 aaPredicted RBP17.23■□□□□ 0.35
ATL3-203ENST00000538786 CEBPZQ03701 1054 aaKnown RBP17.23■□□□□ 0.35
ATL3-203ENST00000538786 PDE4BQ07343 736 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 MFSD14BQ5SR56 506 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 FAM205AQ6ZU69 1335 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 AIFM3Q96NN9 605 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 COA1Q9GZY4 146 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 GJB4Q9NTQ9 266 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 RTEL1Q9NZ71 1219 aa17.23■□□□□ 0.35
ATL3-203ENST00000538786 CYP2D6P10635 497 aa17.22■□□□□ 0.35
ATL3-203ENST00000538786 C12orf60Q5U649 245 aa17.22■□□□□ 0.35
ATL3-203ENST00000538786 KRT40Q6A162 431 aa17.22■□□□□ 0.35
ATL3-203ENST00000538786 SLF2Q8IX21 1173 aa17.22■□□□□ 0.35
ATL3-203ENST00000538786 TRIM22Q8IYM9 498 aa17.22■□□□□ 0.35
ATL3-203ENST00000538786 SLC26A6Q9BXS9 759 aa17.22■□□□□ 0.35
ATL3-203ENST00000538786 FTOQ9C0B1 505 aaKnown RBP eCLIP17.22■□□□□ 0.35
ATL3-203ENST00000538786 DDX19AQ9NUU7 478 aaKnown RBP17.22■□□□□ 0.35
ATL3-203ENST00000538786 BAZ2AQ9UIF9 1905 aaKnown RBP17.21■□□□□ 0.35
ATL3-203ENST00000538786 GPR75-ASB3A0A0A6YYF3 556 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 USP17L8P0C7I0 530 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 EVX2Q03828 476 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 TRIM29Q14134 588 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 IFIT1BQ5T764 474 aaKnown RBP17.21■□□□□ 0.35
ATL3-203ENST00000538786 MSL1Q68DK7 614 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 MPNDQ8N594 471 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 BICD2Q8TD16 824 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 NUP133Q8WUM0 1156 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 FAM163AQ96GL9 167 aaPredicted RBP17.21■□□□□ 0.35
ATL3-203ENST00000538786 LAMB1P07942 1786 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 POLR3DP05423 398 aaPredicted RBP17.21■□□□□ 0.35
ATL3-203ENST00000538786 MYSM1Q5VVJ2 828 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 CATIPQ7Z7H3 387 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 NBPF11Q86T75 865 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 AMOTL1Q8IY63 956 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 CRACR2BQ8N4Y2 399 aaPredicted RBP17.21■□□□□ 0.35
ATL3-203ENST00000538786 TMX4Q9H1E5 349 aaPredicted RBP17.21■□□□□ 0.35
ATL3-203ENST00000538786 NUP62CLQ9H1M0 184 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 POLR3EQ9NVU0 708 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 DACT1Q9NYF0 836 aa17.21■□□□□ 0.35
ATL3-203ENST00000538786 ROBO3Q96MS0 1386 aa17.2■□□□□ 0.34
ATL3-203ENST00000538786 CALM1P0DP23 149 aa17.2■□□□□ 0.34
ATL3-203ENST00000538786 CALM2P0DP24 149 aa17.2■□□□□ 0.34
ATL3-203ENST00000538786 CALM3P0DP25 149 aa17.2■□□□□ 0.34
ATL3-203ENST00000538786 PLCG2P16885 1265 aa17.2■□□□□ 0.34
ATL3-203ENST00000538786 BTDP43251 543 aa17.2■□□□□ 0.34
ATL3-203ENST00000538786 DPP8Q6V1X1 898 aaPredicted RBP17.2■□□□□ 0.34
ATL3-203ENST00000538786 ZC3H12CQ9C0D7 883 aaKnown RBP17.2■□□□□ 0.34
ATL3-203ENST00000538786 MYH15Q9Y2K3 1946 aa17.2■□□□□ 0.34
ATL3-203ENST00000538786 CCDC173Q0VFZ6 552 aa17.19■□□□□ 0.34
ATL3-203ENST00000538786 SLC15A2Q16348 729 aa17.19■□□□□ 0.34
ATL3-203ENST00000538786 TGFBRAP1Q8WUH2 860 aa17.19■□□□□ 0.34
ATL3-203ENST00000538786 GAKO14976 1311 aa17.19■□□□□ 0.34
ATL3-203ENST00000538786 RIMBP2O15034 1052 aa17.19■□□□□ 0.34
ATL3-203ENST00000538786 DDAH1O94760 285 aa17.19■□□□□ 0.34
ATL3-203ENST00000538786 DEXIO95424 95 aa17.19■□□□□ 0.34
ATL3-203ENST00000538786 YEATS4O95619 227 aa17.19■□□□□ 0.34
ATL3-203ENST00000538786 CAMKK2Q96RR4 588 aa17.19■□□□□ 0.34
ATL3-203ENST00000538786 PPP1R9BQ96SB3 815 aa17.19■□□□□ 0.34
ATL3-203ENST00000538786 FUCA2Q9BTY2 467 aa17.19■□□□□ 0.34
ATL3-203ENST00000538786 SUGT1Q9Y2Z0 365 aa17.19■□□□□ 0.34
ATL3-203ENST00000538786 TSPY2A6NKD2 308 aa17.18■□□□□ 0.34
ATL3-203ENST00000538786 U2AF2P26368 475 aaKnown RBP eCLIP17.18■□□□□ 0.34
ATL3-203ENST00000538786 GTF2IP78347 998 aa17.18■□□□□ 0.34
ATL3-203ENST00000538786 TROAPQ12815 778 aa17.18■□□□□ 0.34
ATL3-203ENST00000538786 FAM47AQ5JRC9 791 aa17.18■□□□□ 0.34
ATL3-203ENST00000538786 LINC00301Q8NCQ3 95 aa17.18■□□□□ 0.34
ATL3-203ENST00000538786 CLSTN2Q9H4D0 955 aa17.18■□□□□ 0.34
ATL3-203ENST00000538786 RBM28Q9NW13 759 aaKnown RBP17.18■□□□□ 0.34
ATL3-203ENST00000538786 NR1I2O75469 434 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 ME1P48163 572 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 EZH2Q15910 746 aaKnown RBP17.17■□□□□ 0.34
ATL3-203ENST00000538786 MAP3K11Q16584 847 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 STYK1Q6J9G0 422 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 OLFM4Q6UX06 510 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 RNF214Q8ND24 703 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 KCNG4Q8TDN1 519 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 RNF26Q9BY78 433 aaPredicted RBP17.17■□□□□ 0.34
ATL3-203ENST00000538786 TNMDQ9H2S6 317 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 ANO8Q9HCE9 1232 aaPredicted RBP17.17■□□□□ 0.34
ATL3-203ENST00000538786 STK32BQ9NY57 414 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 COL11A2P13942 1736 aaPredicted RBP17.17■□□□□ 0.34
ATL3-203ENST00000538786 UBE2Q2LH0YL09 131 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 GUCY1A2P33402 732 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 GNL2Q13823 731 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms