RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 MFSD14BQ5SR56 506 aa23.77■■□□□ 1.4
DDX55-205ENST00000538744 SLF2Q8IX21 1173 aa23.77■■□□□ 1.4
DDX55-205ENST00000538744 ALG1Q9BT22 464 aa23.77■■□□□ 1.4
DDX55-205ENST00000538744 COA1Q9GZY4 146 aa23.77■■□□□ 1.4
DDX55-205ENST00000538744 MCM9Q9NXL9 1143 aa23.77■■□□□ 1.4
DDX55-205ENST00000538744 CCDC196A0A1B0GTZ2 297 aa23.76■■□□□ 1.39
DDX55-205ENST00000538744 IFNAR1P17181 557 aa23.76■■□□□ 1.39
DDX55-205ENST00000538744 PDE4BQ07343 736 aa23.76■■□□□ 1.39
DDX55-205ENST00000538744 SSRP1Q08945 709 aaKnown RBP23.76■■□□□ 1.39
DDX55-205ENST00000538744 SLC15A2Q16348 729 aa23.76■■□□□ 1.39
DDX55-205ENST00000538744 OTUD7BQ6GQQ9 843 aa23.76■■□□□ 1.39
DDX55-205ENST00000538744 PHKBQ93100 1093 aa23.76■■□□□ 1.39
DDX55-205ENST00000538744 CAMKK2Q96RR4 588 aa23.76■■□□□ 1.39
DDX55-205ENST00000538744 RTFDC1Q9BY42 306 aaPredicted RBP23.76■■□□□ 1.39
DDX55-205ENST00000538744 STK32BQ9NY57 414 aa23.76■■□□□ 1.39
DDX55-205ENST00000538744 MKRN1Q9UHC7 482 aaKnown RBP23.76■■□□□ 1.39
DDX55-205ENST00000538744 PRDM1O75626 825 aa23.76■■□□□ 1.39
DDX55-205ENST00000538744 CYP2D6P10635 497 aa23.76■■□□□ 1.39
DDX55-205ENST00000538744 EZH2Q15910 746 aaKnown RBP23.76■■□□□ 1.39
DDX55-205ENST00000538744 DPP8Q6V1X1 898 aaPredicted RBP23.76■■□□□ 1.39
DDX55-205ENST00000538744 BRAPQ7Z569 592 aa23.76■■□□□ 1.39
DDX55-205ENST00000538744 ILDR1Q86SU0 546 aaPredicted RBP23.76■■□□□ 1.39
DDX55-205ENST00000538744 KLHL34Q8N239 644 aa23.76■■□□□ 1.39
DDX55-205ENST00000538744 ENAHQ8N8S7 591 aaPredicted RBP23.76■■□□□ 1.39
DDX55-205ENST00000538744 ANO8Q9HCE9 1232 aaPredicted RBP23.76■■□□□ 1.39
DDX55-205ENST00000538744 RIMBP2O15034 1052 aa23.75■■□□□ 1.39
DDX55-205ENST00000538744 FMNL1O95466 1100 aaPredicted RBP23.75■■□□□ 1.39
DDX55-205ENST00000538744 NT5C2P49902 561 aa23.75■■□□□ 1.39
DDX55-205ENST00000538744 AMOTL1Q8IY63 956 aa23.75■■□□□ 1.39
DDX55-205ENST00000538744 ZC3H12CQ9C0D7 883 aaKnown RBP23.75■■□□□ 1.39
DDX55-205ENST00000538744 RCOR1Q9UKL0 485 aa23.75■■□□□ 1.39
DDX55-205ENST00000538744 USP17L8P0C7I0 530 aa23.74■■□□□ 1.39
DDX55-205ENST00000538744 NASPP49321 788 aaPredicted RBP23.74■■□□□ 1.39
DDX55-205ENST00000538744 EN1Q05925 392 aaPredicted RBP23.74■■□□□ 1.39
DDX55-205ENST00000538744 PPP2R5BQ15173 497 aa23.74■■□□□ 1.39
DDX55-205ENST00000538744 C12orf60Q5U649 245 aa23.74■■□□□ 1.39
DDX55-205ENST00000538744 WASF1Q92558 559 aa23.74■■□□□ 1.39
DDX55-205ENST00000538744 TSPY26PQ9H489 355 aa23.74■■□□□ 1.39
DDX55-205ENST00000538744 ROBO3Q96MS0 1386 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 GPR75-ASB3A0A0A6YYF3 556 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 PLCG2P16885 1265 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 BTDP43251 543 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 EVX2Q03828 476 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 IFIT1BQ5T764 474 aaKnown RBP23.73■■□□□ 1.39
DDX55-205ENST00000538744 C2CD5Q86YS7 1000 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 FANCBQ8NB91 859 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 FAM163AQ96GL9 167 aaPredicted RBP23.73■■□□□ 1.39
DDX55-205ENST00000538744 SLC26A6Q9BXS9 759 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 RBSNQ9H1K0 784 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 DDX60LQ5H9U9 1706 aaKnown RBP23.73■■□□□ 1.39
DDX55-205ENST00000538744 STYK1Q6J9G0 422 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 TRIM22Q8IYM9 498 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 NUP133Q8WUM0 1156 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 ZNF622Q969S3 477 aaKnown RBP eCLIP23.73■■□□□ 1.396e-7■■□□□ 14.5
DDX55-205ENST00000538744 PGBD1Q96JS3 809 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 USP28Q96RU2 1077 aa23.73■■□□□ 1.39
DDX55-205ENST00000538744 GAKO14976 1311 aa23.72■■□□□ 1.39
DDX55-205ENST00000538744 MYH6P13533 1939 aa23.72■■□□□ 1.39
DDX55-205ENST00000538744 H0YIN7 160 aa23.72■■□□□ 1.39
DDX55-205ENST00000538744 GTF2IP78347 998 aa23.72■■□□□ 1.39
DDX55-205ENST00000538744 KIF23Q02241 960 aaPredicted RBP23.72■■□□□ 1.39
DDX55-205ENST00000538744 CEBPZQ03701 1054 aaKnown RBP23.72■■□□□ 1.39
DDX55-205ENST00000538744 TRIM29Q14134 588 aa23.72■■□□□ 1.39
DDX55-205ENST00000538744 CATIPQ7Z7H3 387 aa23.72■■□□□ 1.39
DDX55-205ENST00000538744 TGFBRAP1Q8WUH2 860 aa23.72■■□□□ 1.39
DDX55-205ENST00000538744 AIFM3Q96NN9 605 aa23.72■■□□□ 1.39
DDX55-205ENST00000538744 GJB4Q9NTQ9 266 aa23.72■■□□□ 1.39
DDX55-205ENST00000538744 SUGT1Q9Y2Z0 365 aa23.72■■□□□ 1.39
DDX55-205ENST00000538744 FOCADQ5VW36 1801 aa23.71■■□□□ 1.39
DDX55-205ENST00000538744 KRT40Q6A162 431 aa23.71■■□□□ 1.39
DDX55-205ENST00000538744 OLFM4Q6UX06 510 aa23.71■■□□□ 1.39
DDX55-205ENST00000538744 EYA3Q99504 573 aa23.71■■□□□ 1.39
DDX55-205ENST00000538744 CALM1P0DP23 149 aa23.7■■□□□ 1.39
DDX55-205ENST00000538744 CALM2P0DP24 149 aa23.7■■□□□ 1.39
DDX55-205ENST00000538744 CALM3P0DP25 149 aa23.7■■□□□ 1.39
DDX55-205ENST00000538744 LIG1P18858 919 aa23.7■■□□□ 1.39
DDX55-205ENST00000538744 BICD2Q8TD16 824 aa23.7■■□□□ 1.39
DDX55-205ENST00000538744 TEX11Q8IYF3 940 aa23.7■■□□□ 1.38
DDX55-205ENST00000538744 FTOQ9C0B1 505 aaKnown RBP eCLIP23.7■■□□□ 1.38
DDX55-205ENST00000538744 RTEL1Q9NZ71 1219 aa23.7■■□□□ 1.38
DDX55-205ENST00000538744 KIF28PB7ZC32 967 aa23.69■■□□□ 1.38
DDX55-205ENST00000538744 DDAH1O94760 285 aa23.69■■□□□ 1.38
DDX55-205ENST00000538744 MYSM1Q5VVJ2 828 aa23.69■■□□□ 1.38
DDX55-205ENST00000538744 NBPF11Q86T75 865 aa23.69■■□□□ 1.38
DDX55-205ENST00000538744 CRACR2BQ8N4Y2 399 aaPredicted RBP23.69■■□□□ 1.38
DDX55-205ENST00000538744 DDX19AQ9NUU7 478 aaKnown RBP23.69■■□□□ 1.38
DDX55-205ENST00000538744 RBM28Q9NW13 759 aaKnown RBP23.69■■□□□ 1.38
DDX55-205ENST00000538744 MYH1P12882 1939 aa23.68■■□□□ 1.38
DDX55-205ENST00000538744 TSPY2A6NKD2 308 aa23.68■■□□□ 1.38
DDX55-205ENST00000538744 DEXIO95424 95 aa23.68■■□□□ 1.38
DDX55-205ENST00000538744 POLR3DP05423 398 aaPredicted RBP23.68■■□□□ 1.38
DDX55-205ENST00000538744 FAM47AQ5JRC9 791 aa23.68■■□□□ 1.38
DDX55-205ENST00000538744 MAPKAPK5Q8IW41 473 aa23.68■■□□□ 1.38
DDX55-205ENST00000538744 ANP32BQ92688 251 aaKnown RBP23.68■■□□□ 1.38
DDX55-205ENST00000538744 SLX4Q8IY92 1834 aa23.68■■□□□ 1.38
DDX55-205ENST00000538744 G3V3G9 751 aa23.67■■□□□ 1.38
DDX55-205ENST00000538744 SLC4A8Q2Y0W8 1093 aa23.67■■□□□ 1.38
DDX55-205ENST00000538744 DCAF8Q5TAQ9 597 aa23.67■■□□□ 1.38
DDX55-205ENST00000538744 FBXW7Q969H0 707 aa23.67■■□□□ 1.38
DDX55-205ENST00000538744 NUP62CLQ9H1M0 184 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms