RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 ZNF594Q96JF6 807 aaPredicted RBP7.5□□□□□ -1.21
DDB1-210ENST00000538129 NOB1Q9ULX3 412 aaKnown RBP7.5□□□□□ -1.21
DDB1-210ENST00000538129 N4BP2Q86UW6 1770 aaPredicted RBP7.5□□□□□ -1.21
DDB1-210ENST00000538129 RIC1Q4ADV7 1423 aa7.5□□□□□ -1.21
DDB1-210ENST00000538129 PXDNLA1KZ92 1463 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 A0A1B0GTH6 734 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 SLC35F4A4IF30 521 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 TMEM229AB2RXF0 380 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 F6X3S4 739 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 IRS4O14654 1257 aaPredicted RBP7.49□□□□□ -1.21
DDB1-210ENST00000538129 PPFIA3O75145 1194 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 ALDH1L1O75891 902 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 CLDN10P78369 228 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 GCKRQ14397 625 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 SF3B3Q15393 1217 aaKnown RBP7.49□□□□□ -1.21
DDB1-210ENST00000538129 CWF19L2Q2TBE0 894 aaKnown RBP7.49□□□□□ -1.21
DDB1-210ENST00000538129 SYNE4Q8N205 404 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.49□□□□□ -1.21
DDB1-210ENST00000538129 C1orf216Q8TAB5 229 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 ZNF622Q969S3 477 aaKnown RBP eCLIP7.49□□□□□ -1.21
DDB1-210ENST00000538129 BCL2L13Q9BXK5 485 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 API5Q9BZZ5 524 aaKnown RBP7.49□□□□□ -1.21
DDB1-210ENST00000538129 SRCIN1Q9C0H9 1055 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 ZNF358Q9NW07 568 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 HRH3Q9Y5N1 445 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 KIAA1551Q9HCM1 1747 aa7.49□□□□□ -1.21
DDB1-210ENST00000538129 BRCA1P38398 1863 aaKnown RBP7.49□□□□□ -1.21
DDB1-210ENST00000538129 H3BM21 787 aa7.48□□□□□ -1.21
DDB1-210ENST00000538129 ZBTB7BO15156 539 aaPredicted RBP7.48□□□□□ -1.21
DDB1-210ENST00000538129 BCAR3O75815 825 aa7.48□□□□□ -1.21
DDB1-210ENST00000538129 HCLS1P14317 486 aaPredicted RBP7.48□□□□□ -1.21
DDB1-210ENST00000538129 YBX3P16989 372 aaKnown RBP eCLIP7.48□□□□□ -1.219e-9■■■□□ 19.2
DDB1-210ENST00000538129 RHOQP17081 205 aa7.48□□□□□ -1.21
DDB1-210ENST00000538129 MTFR1Q15390 333 aa7.48□□□□□ -1.21
DDB1-210ENST00000538129 SLC4A10Q6U841 1118 aa7.48□□□□□ -1.21
DDB1-210ENST00000538129 RIPOR1Q6ZS17 1223 aa7.48□□□□□ -1.21
DDB1-210ENST00000538129 ANKMY2Q8IV38 441 aa7.48□□□□□ -1.21
DDB1-210ENST00000538129 FAM200AQ8TCP9 573 aa7.48□□□□□ -1.21
DDB1-210ENST00000538129 RPGRQ92834 1020 aaKnown RBP7.48□□□□□ -1.21
DDB1-210ENST00000538129 RBM17Q96I25 401 aaKnown RBP7.48□□□□□ -1.21
DDB1-210ENST00000538129 CRAMP1Q96RY5 1269 aa7.48□□□□□ -1.21
DDB1-210ENST00000538129 GAS2L1Q99501 681 aaPredicted RBP7.48□□□□□ -1.21
DDB1-210ENST00000538129 HINFPQ9BQA5 517 aa7.48□□□□□ -1.21
DDB1-210ENST00000538129 BCS1LQ9Y276 419 aa7.48□□□□□ -1.21
DDB1-210ENST00000538129 KIF16BQ96L93 1317 aa7.48□□□□□ -1.21
DDB1-210ENST00000538129 CDHR2Q9BYE9 1310 aa7.48□□□□□ -1.21
DDB1-210ENST00000538129 ABCC12Q96J65 1359 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 DLEC1Q9Y238 1755 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 USP17L15C9J2P7 530 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 USP17L10C9JJH3 530 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 USP17L13C9JLJ4 530 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 USP17L12C9JPN9 530 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 USP17L11C9JVI0 530 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 USP17L21D6R901 530 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 USP17L18D6R9N7 530 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 USP17L22D6RA61 530 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 USP17L17D6RBQ6 530 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 USP17L19D6RCP7 530 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 USP17L20D6RJB6 530 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 GRM8O00222 908 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 PDE8AO60658 829 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 BBOX1O75936 387 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 F11P03951 625 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 ITGA6P23229 1130 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 CCT4P50991 539 aaKnown RBP7.47□□□□□ -1.21
DDB1-210ENST00000538129 USP17L24Q0WX57 530 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 SOGA3Q5TF21 947 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 TREML4Q6UXN2 200 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 ATF7IPQ6VMQ6 1270 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 SV2AQ7L0J3 742 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 RGS22Q8NE09 1264 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 C7orf43Q8WVR3 580 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 PBXIP1Q96AQ6 731 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 PLA2G12BQ9BX93 195 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 C9orf78Q9NZ63 289 aaPredicted RBP7.47□□□□□ -1.21
DDB1-210ENST00000538129 SCHIP1Q9P0W5 487 aaPredicted RBP7.47□□□□□ -1.21
DDB1-210ENST00000538129 ARFGEF1Q9Y6D6 1849 aa7.47□□□□□ -1.21
DDB1-210ENST00000538129 SLX4Q8IY92 1834 aa7.46□□□□□ -1.21
DDB1-210ENST00000538129 CASP7P55210 303 aa7.46□□□□□ -1.22
DDB1-210ENST00000538129 PTK7Q13308 1070 aa7.46□□□□□ -1.22
DDB1-210ENST00000538129 LBRQ14739 615 aaKnown RBP7.46□□□□□ -1.22
DDB1-210ENST00000538129 EFHC2Q5JST6 749 aa7.46□□□□□ -1.22
DDB1-210ENST00000538129 ZKSCAN2Q63HK3 967 aa7.46□□□□□ -1.22
DDB1-210ENST00000538129 INTS3Q68E01 1043 aaKnown RBP7.46□□□□□ -1.22
DDB1-210ENST00000538129 PRPF40BQ6NWY9 871 aaKnown RBP7.46□□□□□ -1.22
DDB1-210ENST00000538129 ARHGAP27Q6ZUM4 889 aa7.46□□□□□ -1.22
DDB1-210ENST00000538129 DDX46Q7L014 1031 aaKnown RBP7.46□□□□□ -1.22
DDB1-210ENST00000538129 UBE3BQ7Z3V4 1068 aa7.46□□□□□ -1.22
DDB1-210ENST00000538129 TMC4Q7Z404 712 aa7.46□□□□□ -1.22
DDB1-210ENST00000538129 JARID2Q92833 1246 aaPredicted RBP7.46□□□□□ -1.22
DDB1-210ENST00000538129 FRAT1Q92837 279 aaPredicted RBP7.46□□□□□ -1.22
DDB1-210ENST00000538129 AIDAQ96BJ3 306 aa7.46□□□□□ -1.22
DDB1-210ENST00000538129 YTHDC1Q96MU7 727 aaKnown RBP7.46□□□□□ -1.22
DDB1-210ENST00000538129 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.46□□□□□ -1.229e-9■■■■■ 47.8
DDB1-210ENST00000538129 RCAN3Q9UKA8 241 aa7.46□□□□□ -1.22
DDB1-210ENST00000538129 HDAC5Q9UQL6 1122 aa7.46□□□□□ -1.22
DDB1-210ENST00000538129 UTYO14607 1347 aa7.46□□□□□ -1.22
DDB1-210ENST00000538129 CHD4Q14839 1912 aa7.45□□□□□ -1.22
DDB1-210ENST00000538129 DDX60Q8IY21 1712 aaKnown RBP7.45□□□□□ -1.22
DDB1-210ENST00000538129 CDC14CA4D256 554 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms