RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 ZFPM1Q8IX07 1006 aa9.61□□□□□ -0.87
CIT-209ENST00000538073 IFNL3Q8IZI9 196 aa9.61□□□□□ -0.87
CIT-209ENST00000538073 MAP4K1Q92918 833 aa9.61□□□□□ -0.87
CIT-209ENST00000538073 DCPSQ96C86 337 aaKnown RBP9.61□□□□□ -0.87
CIT-209ENST00000538073 TEPSINQ96N21 525 aa9.61□□□□□ -0.87
CIT-209ENST00000538073 LSG1Q9H089 658 aaKnown RBP9.61□□□□□ -0.87
CIT-209ENST00000538073 PPP2R3BQ9Y5P8 575 aa9.61□□□□□ -0.87
CIT-209ENST00000538073 LAMB1P07942 1786 aa9.6□□□□□ -0.87
CIT-209ENST00000538073 EPB41L2O43491 1005 aaKnown RBP9.6□□□□□ -0.87
CIT-209ENST00000538073 ST18O60284 1047 aa9.6□□□□□ -0.87
CIT-209ENST00000538073 FGAP02671 866 aa9.6□□□□□ -0.87
CIT-209ENST00000538073 PTH1RQ03431 593 aa9.6□□□□□ -0.87
CIT-209ENST00000538073 TCP10Q12799 353 aa9.6□□□□□ -0.87
CIT-209ENST00000538073 RASA3Q14644 834 aa9.6□□□□□ -0.87
CIT-209ENST00000538073 SBK1Q52WX2 424 aa9.6□□□□□ -0.87
CIT-209ENST00000538073 CTR9Q6PD62 1173 aa9.6□□□□□ -0.87
CIT-209ENST00000538073 SH3BP5LQ7L8J4 393 aa9.6□□□□□ -0.87
CIT-209ENST00000538073 IFNL1Q8IU54 200 aa9.6□□□□□ -0.87
CIT-209ENST00000538073 TMEM106CQ9BVX2 250 aa9.6□□□□□ -0.87
CIT-209ENST00000538073 DEFB129Q9H1M3 183 aa9.6□□□□□ -0.87
CIT-209ENST00000538073 LAMA4Q16363 1823 aa9.6□□□□□ -0.87
CIT-209ENST00000538073 DDTLA6NHG4 134 aaPredicted RBP9.59□□□□□ -0.87
CIT-209ENST00000538073 USP17L12C9JPN9 530 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 USP17L21D6R901 530 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 EIF5BO60841 1220 aaKnown RBP9.59□□□□□ -0.87
CIT-209ENST00000538073 APPP05067 770 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 MAP3K10Q02779 954 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 C12orf60Q5U649 245 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 MAP1SQ66K74 1059 aaPredicted RBP9.59□□□□□ -0.87
CIT-209ENST00000538073 CDC37L1Q7L3B6 337 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 KRT26Q7Z3Y9 468 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 METTL16Q86W50 562 aaKnown RBP9.59□□□□□ -0.87
CIT-209ENST00000538073 SULF1Q8IWU6 871 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 DDRGK1Q96HY6 314 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 NACAP1Q9BZK3 213 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 TMEM39BQ9GZU3 492 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 NAPBQ9H115 298 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 DHX36Q9H2U1 1008 aaKnown RBP9.59□□□□□ -0.87
CIT-209ENST00000538073 ANO2Q9NQ90 1003 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 ARPP21Q9UBL0 812 aaPredicted RBP9.59□□□□□ -0.87
CIT-209ENST00000538073 PALD1Q9ULE6 856 aa9.59□□□□□ -0.87
CIT-209ENST00000538073 SCAF8Q9UPN6 1271 aaKnown RBP9.59□□□□□ -0.87
CIT-209ENST00000538073 ADM5C9JUS6 153 aa9.58□□□□□ -0.88
CIT-209ENST00000538073 TOMM70O94826 608 aa9.58□□□□□ -0.88
CIT-209ENST00000538073 REC8O95072 547 aa9.58□□□□□ -0.88
CIT-209ENST00000538073 ITGBL1O95965 494 aaPredicted RBP9.58□□□□□ -0.88
CIT-209ENST00000538073 TDO2P48775 406 aa9.58□□□□□ -0.88
CIT-209ENST00000538073 PLCD1P51178 756 aa9.58□□□□□ -0.88
CIT-209ENST00000538073 KIAA1211Q6ZU35 1233 aa9.58□□□□□ -0.88
CIT-209ENST00000538073 USP48Q86UV5 1035 aa9.58□□□□□ -0.88
CIT-209ENST00000538073 RBM46Q8TBY0 533 aaKnown RBP9.58□□□□□ -0.88
CIT-209ENST00000538073 GLIS2Q9BZE0 524 aaPredicted RBP9.58□□□□□ -0.88
CIT-209ENST00000538073 EHD4Q9H223 541 aa9.58□□□□□ -0.88
CIT-209ENST00000538073 MCM9Q9NXL9 1143 aa9.58□□□□□ -0.88
CIT-209ENST00000538073 SAP30BPQ9UHR5 308 aaKnown RBP9.58□□□□□ -0.88
CIT-209ENST00000538073 ANAPC4Q9UJX5 808 aa9.58□□□□□ -0.88
CIT-209ENST00000538073 TAOK2Q9UL54 1235 aa9.58□□□□□ -0.88
CIT-209ENST00000538073 ROBO3Q96MS0 1386 aa9.58□□□□□ -0.88
CIT-209ENST00000538073 SSC5DA1L4H1 1573 aa9.58□□□□□ -0.88
CIT-209ENST00000538073 CYP2D7A0A087X1C5 515 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 POLR3DP05423 398 aaPredicted RBP9.57□□□□□ -0.88
CIT-209ENST00000538073 HLA-DOAP06340 250 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 CYP2D6P10635 497 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 NUBP1P53384 320 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 GABPAQ06546 454 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 PPARAQ07869 468 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 NECTIN1Q15223 517 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 NBPF12Q5TAG4 269 aaPredicted RBP9.57□□□□□ -0.88
CIT-209ENST00000538073 DLK2Q6UY11 383 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 TTC6Q86TZ1 520 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 FAM212AQ96EL1 285 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 CSRNP1Q96S65 589 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 USP26Q9BXU7 913 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 BACH2Q9BYV9 841 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 PI4KBQ9UBF8 816 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 CTNNA3Q9UI47 895 aa9.57□□□□□ -0.88
CIT-209ENST00000538073 RBM8AQ9Y5S9 174 aaKnown RBP9.57□□□□□ -0.88
CIT-209ENST00000538073 TRPM7Q96QT4 1865 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 PAPPA2Q9BXP8 1791 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 SMIM22K7EJ46 135 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 TBC1D12O60347 775 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 FGRP09769 529 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 C1QTNF8P60827 252 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 SUPT20HL1Q3ZLR7 823 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 PRAMEF18Q5VWM3 479 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 C16orf86Q6ZW13 317 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 FOXP4Q8IVH2 680 aaPredicted RBP9.56□□□□□ -0.88
CIT-209ENST00000538073 ZSCAN29Q8IWY8 852 aaPredicted RBP9.56□□□□□ -0.88
CIT-209ENST00000538073 AMOTL1Q8IY63 956 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 SMC1BQ8NDV3 1235 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 KCNB2Q92953 911 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 HOOK2Q96ED9 719 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 CDCA5Q96FF9 252 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 NBPF3Q9H094 633 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 DNAJC18Q9H819 358 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 HERC5Q9UII4 1024 aaKnown RBP9.56□□□□□ -0.88
CIT-209ENST00000538073 PASKQ96RG2 1323 aa9.56□□□□□ -0.88
CIT-209ENST00000538073 MINDY4BA8MYZ0 360 aa9.55□□□□□ -0.88
CIT-209ENST00000538073 TRAF5O00463 557 aa9.55□□□□□ -0.88
CIT-209ENST00000538073 ZNF213O14771 459 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms