RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.88□□□□□ -0.51
CHD4-207ENST00000537634 SLC45A1Q9Y2W3 748 aa11.88□□□□□ -0.51
CHD4-207ENST00000537634 CDK5RAP2Q96SN8 1893 aa11.87□□□□□ -0.51
CHD4-207ENST00000537634 GRK4P32298 578 aa11.87□□□□□ -0.51
CHD4-207ENST00000537634 CCDC84Q86UT8 332 aaPredicted RBP11.87□□□□□ -0.51
CHD4-207ENST00000537634 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
CHD4-207ENST00000537634 AATFQ9NY61 560 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHD4-207ENST00000537634 HERC5Q9UII4 1024 aaKnown RBP11.87□□□□□ -0.51
CHD4-207ENST00000537634 AGTPBP1Q9UPW5 1226 aa11.87□□□□□ -0.51
CHD4-207ENST00000537634 FOCADQ5VW36 1801 aa11.87□□□□□ -0.51
CHD4-207ENST00000537634 LOC285556D6RIA3 1793 aa11.87□□□□□ -0.51
CHD4-207ENST00000537634 MYO5AQ9Y4I1 1855 aaKnown RBP11.87□□□□□ -0.51
CHD4-207ENST00000537634 RLBP1P12271 317 aa11.86□□□□□ -0.51
CHD4-207ENST00000537634 PRKCZQ05513 592 aa11.86□□□□□ -0.51
CHD4-207ENST00000537634 DIEXFQ68CQ4 756 aaKnown RBP11.86□□□□□ -0.51
CHD4-207ENST00000537634 TBC1D2Q9BYX2 928 aa11.86□□□□□ -0.51
CHD4-207ENST00000537634 BIN2Q9UBW5 565 aaPredicted RBP11.86□□□□□ -0.51
CHD4-207ENST00000537634 PNMA3Q9UL41 463 aa11.86□□□□□ -0.51
CHD4-207ENST00000537634 NOP58Q9Y2X3 529 aaKnown RBP11.86□□□□□ -0.51
CHD4-207ENST00000537634 SIPA1L1O43166 1804 aa11.86□□□□□ -0.51
CHD4-207ENST00000537634 ZBTB7BO15156 539 aaPredicted RBP11.85□□□□□ -0.51
CHD4-207ENST00000537634 CYP2E1P05181 493 aaPredicted RBP11.85□□□□□ -0.51
CHD4-207ENST00000537634 CAP2P40123 477 aa11.85□□□□□ -0.51
CHD4-207ENST00000537634 UBXN2AP68543 259 aa11.85□□□□□ -0.51
CHD4-207ENST00000537634 SPP2Q13103 211 aa11.85□□□□□ -0.51
CHD4-207ENST00000537634 MTFR1Q15390 333 aa11.85□□□□□ -0.51
CHD4-207ENST00000537634 PROCA1Q8NCQ7 364 aaPredicted RBP11.85□□□□□ -0.51
CHD4-207ENST00000537634 ZNF280CQ8ND82 737 aa11.85□□□□□ -0.51
CHD4-207ENST00000537634 ZNF512BQ96KM6 892 aaPredicted RBP11.85□□□□□ -0.51
CHD4-207ENST00000537634 TRIM34Q9BYJ4 488 aa11.85□□□□□ -0.51
CHD4-207ENST00000537634 DHX36Q9H2U1 1008 aaKnown RBP11.85□□□□□ -0.51
CHD4-207ENST00000537634 AS3MTQ9HBK9 375 aa11.85□□□□□ -0.51
CHD4-207ENST00000537634 PI4KBQ9UBF8 816 aa11.85□□□□□ -0.51
CHD4-207ENST00000537634 DBNLQ9UJU6 430 aaKnown RBP11.85□□□□□ -0.51
CHD4-207ENST00000537634 FLT1P17948 1338 aa11.85□□□□□ -0.51
CHD4-207ENST00000537634 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
CHD4-207ENST00000537634 USP17L5A8MUK1 530 aa11.84□□□□□ -0.51
CHD4-207ENST00000537634 TNPO2O14787 897 aaKnown RBP11.84□□□□□ -0.51
CHD4-207ENST00000537634 IGSF3O75054 1194 aa11.84□□□□□ -0.51
CHD4-207ENST00000537634 ZAP70P43403 619 aa11.84□□□□□ -0.51
CHD4-207ENST00000537634 HMGCS2P54868 508 aa11.84□□□□□ -0.51
CHD4-207ENST00000537634 PPP4CP60510 307 aa11.84□□□□□ -0.51
CHD4-207ENST00000537634 PABPC4Q13310 644 aaKnown RBP eCLIP11.84□□□□□ -0.51
CHD4-207ENST00000537634 TREML2Q5T2D2 321 aa11.84□□□□□ -0.51
CHD4-207ENST00000537634 MAPKAPK5Q8IW41 473 aa11.84□□□□□ -0.51
CHD4-207ENST00000537634 CRACR2BQ8N4Y2 399 aaPredicted RBP11.84□□□□□ -0.51
CHD4-207ENST00000537634 SLAIN1Q8ND83 568 aa11.84□□□□□ -0.51
CHD4-207ENST00000537634 NKX2-3Q8TAU0 364 aa11.84□□□□□ -0.51
CHD4-207ENST00000537634 TGFBRAP1Q8WUH2 860 aa11.84□□□□□ -0.51
CHD4-207ENST00000537634 CCDC8Q9H0W5 538 aaPredicted RBP11.84□□□□□ -0.51
CHD4-207ENST00000537634 PIH1D3Q9NQM4 214 aaKnown RBP11.84□□□□□ -0.51
CHD4-207ENST00000537634 TLR7Q9NYK1 1049 aaKnown RBP11.84□□□□□ -0.51
CHD4-207ENST00000537634 ADCY3O60266 1144 aa11.83□□□□□ -0.52
CHD4-207ENST00000537634 IDH1O75874 414 aaKnown RBP11.83□□□□□ -0.52
CHD4-207ENST00000537634 CCL5P13501 91 aa11.83□□□□□ -0.52
CHD4-207ENST00000537634 FLT3LGP49771 235 aa11.83□□□□□ -0.52
CHD4-207ENST00000537634 FAM110CQ1W6H9 321 aa11.83□□□□□ -0.52
CHD4-207ENST00000537634 CEP85Q6P2H3 762 aa11.83□□□□□ -0.52
CHD4-207ENST00000537634 ADGRA1Q86SQ6 560 aa11.83□□□□□ -0.52
CHD4-207ENST00000537634 ERC1Q8IUD2 1116 aa11.83□□□□□ -0.52
CHD4-207ENST00000537634 ANKRD13CQ8N6S4 541 aa11.83□□□□□ -0.52
CHD4-207ENST00000537634 COA7Q96BR5 231 aa11.83□□□□□ -0.52
CHD4-207ENST00000537634 EAF2Q96CJ1 260 aaPredicted RBP11.83□□□□□ -0.52
CHD4-207ENST00000537634 RNF208Q9H0X6 261 aa11.83□□□□□ -0.52
CHD4-207ENST00000537634 GABRQQ9UN88 632 aa11.83□□□□□ -0.52
CHD4-207ENST00000537634 CENPFP49454 3210 aa11.82□□□□□ -0.52
CHD4-207ENST00000537634 HLA-DOAP06340 250 aa11.82□□□□□ -0.52
CHD4-207ENST00000537634 ASNSP08243 561 aa11.82□□□□□ -0.52
CHD4-207ENST00000537634 CYP7A1P22680 504 aa11.82□□□□□ -0.52
CHD4-207ENST00000537634 GCLCP48506 637 aaPredicted RBP11.82□□□□□ -0.52
CHD4-207ENST00000537634 RRP1BQ14684 758 aaKnown RBP11.82□□□□□ -0.52
CHD4-207ENST00000537634 CERS3Q8IU89 383 aa11.82□□□□□ -0.52
CHD4-207ENST00000537634 PANK1Q8TE04 598 aa11.82□□□□□ -0.52
CHD4-207ENST00000537634 SHISA4Q96DD7 197 aa11.82□□□□□ -0.52
CHD4-207ENST00000537634 PALD1Q9ULE6 856 aa11.82□□□□□ -0.52
CHD4-207ENST00000537634 EXOC6BQ9Y2D4 811 aa11.82□□□□□ -0.52
CHD4-207ENST00000537634 MYH1P12882 1939 aa11.82□□□□□ -0.52
CHD4-207ENST00000537634 GJB1P08034 283 aa11.81□□□□□ -0.52
CHD4-207ENST00000537634 MS4A1P11836 297 aa11.81□□□□□ -0.52
CHD4-207ENST00000537634 GJA8P48165 433 aa11.81□□□□□ -0.52
CHD4-207ENST00000537634 DYNLL1P63167 89 aaKnown RBP11.81□□□□□ -0.52
CHD4-207ENST00000537634 MTMR2Q13614 643 aa11.81□□□□□ -0.52
CHD4-207ENST00000537634 HSP90AB4PQ58FF6 505 aa11.81□□□□□ -0.52
CHD4-207ENST00000537634 SH3D19Q5HYK7 790 aa11.81□□□□□ -0.52
CHD4-207ENST00000537634 AACSQ86V21 672 aa11.81□□□□□ -0.52
CHD4-207ENST00000537634 FOXP4Q8IVH2 680 aaPredicted RBP11.81□□□□□ -0.52
CHD4-207ENST00000537634 WDR18Q9BV38 432 aa11.81□□□□□ -0.52
CHD4-207ENST00000537634 DNAJC18Q9H819 358 aa11.81□□□□□ -0.52
CHD4-207ENST00000537634 TMOD4Q9NZQ9 345 aa11.81□□□□□ -0.52
CHD4-207ENST00000537634 PCDH10Q9P2E7 1040 aa11.81□□□□□ -0.52
CHD4-207ENST00000537634 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
CHD4-207ENST00000537634 TAOK2Q9UL54 1235 aa11.81□□□□□ -0.52
CHD4-207ENST00000537634 GDF11O95390 407 aa11.8□□□□□ -0.52
CHD4-207ENST00000537634 INHAP05111 366 aa11.8□□□□□ -0.52
CHD4-207ENST00000537634 ELNP15502 786 aa11.8□□□□□ -0.52
CHD4-207ENST00000537634 USP5P45974 858 aa11.8□□□□□ -0.52
CHD4-207ENST00000537634 BACE1P56817 501 aa11.8□□□□□ -0.52
CHD4-207ENST00000537634 IRX3P78415 501 aaPredicted RBP11.8□□□□□ -0.52
CHD4-207ENST00000537634 MAP3K12Q12852 859 aa11.8□□□□□ -0.52
CHD4-207ENST00000537634 IRF5Q13568 498 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms