RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 ATP2B2Q01814 1243 aa7.86□□□□□ -1.15
SRGAP1-203ENST00000537585 IFI16Q16666 785 aaKnown RBP7.86□□□□□ -1.15
SRGAP1-203ENST00000537585 AOC3Q16853 763 aa7.86□□□□□ -1.15
SRGAP1-203ENST00000537585 ARMCX6Q7L4S7 300 aa7.86□□□□□ -1.15
SRGAP1-203ENST00000537585 SPACA3Q8IXA5 215 aa7.86□□□□□ -1.15
SRGAP1-203ENST00000537585 PCDHB5Q9Y5E4 795 aa7.86□□□□□ -1.15
SRGAP1-203ENST00000537585 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.86□□□□□ -1.15
SRGAP1-203ENST00000537585 PRR33A8MZF0 331 aa7.85□□□□□ -1.15
SRGAP1-203ENST00000537585 TXKP42681 527 aa7.85□□□□□ -1.15
SRGAP1-203ENST00000537585 SEPT6Q14141 434 aa7.85□□□□□ -1.15
SRGAP1-203ENST00000537585 LRRN4CLQ8ND94 238 aa7.85□□□□□ -1.15
SRGAP1-203ENST00000537585 ANKRD24Q8TF21 1146 aa7.85□□□□□ -1.15
SRGAP1-203ENST00000537585 TNKS2Q9H2K2 1166 aa7.85□□□□□ -1.15
SRGAP1-203ENST00000537585 PICK1Q9NRD5 415 aa7.85□□□□□ -1.15
SRGAP1-203ENST00000537585 SLITRK5O94991 958 aa7.84□□□□□ -1.15
SRGAP1-203ENST00000537585 PRKCQQ04759 706 aa7.84□□□□□ -1.15
SRGAP1-203ENST00000537585 SLBPQ14493 270 aaKnown RBP eCLIP7.84□□□□□ -1.15
SRGAP1-203ENST00000537585 MAP3K11Q16584 847 aa7.84□□□□□ -1.15
SRGAP1-203ENST00000537585 NKPD1Q17RQ9 610 aa7.84□□□□□ -1.15
SRGAP1-203ENST00000537585 MEI1Q5TIA1 1274 aa7.84□□□□□ -1.15
SRGAP1-203ENST00000537585 STK11IPQ8N1F8 1099 aa7.84□□□□□ -1.15
SRGAP1-203ENST00000537585 ELMO3Q96BJ8 720 aa7.84□□□□□ -1.15
SRGAP1-203ENST00000537585 DUSP9Q99956 384 aaKnown RBP7.84□□□□□ -1.15
SRGAP1-203ENST00000537585 GIPC1O14908 333 aa7.83□□□□□ -1.16
SRGAP1-203ENST00000537585 FANCGO15287 622 aa7.83□□□□□ -1.16
SRGAP1-203ENST00000537585 GNA15P30679 374 aa7.83□□□□□ -1.16
SRGAP1-203ENST00000537585 WIPI1Q5MNZ9 446 aaPredicted RBP7.83□□□□□ -1.16
SRGAP1-203ENST00000537585 TTBK2Q6IQ55 1244 aa7.83□□□□□ -1.16
SRGAP1-203ENST00000537585 ARHGAP27Q6ZUM4 889 aa7.83□□□□□ -1.16
SRGAP1-203ENST00000537585 CYFIP1Q7L576 1253 aa7.83□□□□□ -1.16
SRGAP1-203ENST00000537585 RIN3Q8TB24 985 aa7.83□□□□□ -1.16
SRGAP1-203ENST00000537585 MISP3Q96FF7 219 aa7.83□□□□□ -1.16
SRGAP1-203ENST00000537585 HRASLS5Q96KN8 279 aa7.83□□□□□ -1.16
SRGAP1-203ENST00000537585 RC3H2Q9HBD1 1191 aaKnown RBP7.83□□□□□ -1.16
SRGAP1-203ENST00000537585 VAV3Q9UKW4 847 aa7.83□□□□□ -1.16
SRGAP1-203ENST00000537585 ANKRD33BA6NCL7 494 aa7.82□□□□□ -1.16
SRGAP1-203ENST00000537585 LRRC14Q15048 493 aa7.82□□□□□ -1.16
SRGAP1-203ENST00000537585 FAM161BQ96MY7 647 aa7.82□□□□□ -1.16
SRGAP1-203ENST00000537585 MKNK2Q9HBH9 465 aa7.82□□□□□ -1.16
SRGAP1-203ENST00000537585 CYP8B1Q9UNU6 501 aa7.82□□□□□ -1.16
SRGAP1-203ENST00000537585 SAMM50Q9Y512 469 aa7.82□□□□□ -1.16
SRGAP1-203ENST00000537585 F6X3S4 739 aa7.81□□□□□ -1.16
SRGAP1-203ENST00000537585 PRPF40AO75400 957 aaKnown RBP7.81□□□□□ -1.16
SRGAP1-203ENST00000537585 HNRNPUQ00839 825 aaKnown RBP eCLIP7.81□□□□□ -1.16
SRGAP1-203ENST00000537585 TMEM265A0A087WTH1 108 aa7.8□□□□□ -1.16
SRGAP1-203ENST00000537585 EIF4BP23588 611 aaKnown RBP7.8□□□□□ -1.16
SRGAP1-203ENST00000537585 TAGLNQ01995 201 aaKnown RBP7.8□□□□□ -1.16
SRGAP1-203ENST00000537585 CCDC85BQ15834 202 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-203ENST00000537585 SV2BQ7L1I2 683 aa7.8□□□□□ -1.16
SRGAP1-203ENST00000537585 XAGE3Q8WTP9 111 aa7.8□□□□□ -1.16
SRGAP1-203ENST00000537585 MIPEPQ99797 713 aa7.8□□□□□ -1.16
SRGAP1-203ENST00000537585 DPH2Q9BQC3 489 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-203ENST00000537585 JUNBP17275 347 aaPredicted RBP7.79□□□□□ -1.16
SRGAP1-203ENST00000537585 CDC37L1Q7L3B6 337 aa7.79□□□□□ -1.16
SRGAP1-203ENST00000537585 WNT10AQ9GZT5 417 aa7.79□□□□□ -1.16
SRGAP1-203ENST00000537585 PITPNM2Q9BZ72 1349 aa7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 IGF2BP3O00425 579 aaKnown RBP eCLIP7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 LRIG2O94898 1065 aa7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 CTSHP09668 335 aa7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 TFE3P19532 575 aaPredicted RBP7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 GRK4P32298 578 aa7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 IKZF1Q13422 519 aa7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 ZNF648Q5T619 568 aaPredicted RBP7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 DNAJC14Q6Y2X3 702 aaPredicted RBP7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 SND1Q7KZF4 910 aaKnown RBP eCLIP7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 NPAS4Q8IUM7 802 aa7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 AEBP1Q8IUX7 1158 aa7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 PI4K2BQ8TCG2 481 aa7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 ZNF507Q8TCN5 953 aa7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 ASIC4Q96FT7 647 aa7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 PRDM5Q9NQX1 630 aaPredicted RBP7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 TLR6Q9Y2C9 796 aa7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 AK5Q9Y6K8 562 aa7.78□□□□□ -1.16
SRGAP1-203ENST00000537585 GFRA2O00451 464 aa7.77□□□□□ -1.17
SRGAP1-203ENST00000537585 LIG3P49916 1009 aa7.77□□□□□ -1.17
SRGAP1-203ENST00000537585 FGD1P98174 961 aa7.77□□□□□ -1.17
SRGAP1-203ENST00000537585 PRAMEF13Q5VWM6 474 aa7.77□□□□□ -1.17
SRGAP1-203ENST00000537585 ATP13A1Q9HD20 1204 aa7.77□□□□□ -1.17
SRGAP1-203ENST00000537585 GTF2IRD1Q9UHL9 959 aa7.77□□□□□ -1.17
SRGAP1-203ENST00000537585 C8AP07357 584 aa7.76□□□□□ -1.17
SRGAP1-203ENST00000537585 ETF1P62495 437 aaKnown RBP7.76□□□□□ -1.17
SRGAP1-203ENST00000537585 ANGEL2Q5VTE6 544 aaKnown RBP7.76□□□□□ -1.17
SRGAP1-203ENST00000537585 HDXQ7Z353 690 aa7.76□□□□□ -1.17
SRGAP1-203ENST00000537585 HSPA12BQ96MM6 686 aa7.76□□□□□ -1.17
SRGAP1-203ENST00000537585 FOXQ1Q9C009 403 aa7.76□□□□□ -1.17
SRGAP1-203ENST00000537585 PARP2Q9UGN5 583 aa7.76□□□□□ -1.17
SRGAP1-203ENST00000537585 KRTAP4-8A0A0G2JLE6 195 aa7.75□□□□□ -1.17
SRGAP1-203ENST00000537585 ZP2Q05996 745 aa7.75□□□□□ -1.17
SRGAP1-203ENST00000537585 EAPPQ56P03 285 aaPredicted RBP7.75□□□□□ -1.17
SRGAP1-203ENST00000537585 CDKAL1Q5VV42 579 aa7.75□□□□□ -1.17
SRGAP1-203ENST00000537585 FYB2Q5VWT5 728 aa7.75□□□□□ -1.17
SRGAP1-203ENST00000537585 SCARA3Q6AZY7 606 aa7.75□□□□□ -1.17
SRGAP1-203ENST00000537585 AGMOQ6ZNB7 445 aa7.75□□□□□ -1.17
SRGAP1-203ENST00000537585 POU5F2Q8N7G0 328 aa7.75□□□□□ -1.17
SRGAP1-203ENST00000537585 FAM168AQ92567 244 aa7.75□□□□□ -1.17
SRGAP1-203ENST00000537585 SEMA3GQ9NS98 782 aa7.75□□□□□ -1.17
SRGAP1-203ENST00000537585 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.75□□□□□ -1.17
SRGAP1-203ENST00000537585 TJP2Q9UDY2 1190 aa7.75□□□□□ -1.17
SRGAP1-203ENST00000537585 GNAT3A8MTJ3 354 aa7.74□□□□□ -1.17
SRGAP1-203ENST00000537585 WASH4PA8MWX3 477 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms