RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ZSCAN20P17040 1043 aaPredicted RBP16.46■□□□□ 0.23
USP44-203ENST00000537435 GRIN1Q05586 938 aa16.46■□□□□ 0.23
USP44-203ENST00000537435 ARAP2Q8WZ64 1704 aa16.46■□□□□ 0.23
USP44-203ENST00000537435 SLU7O95391 586 aaKnown RBP16.46■□□□□ 0.23
USP44-203ENST00000537435 SYT10Q6XYQ8 523 aa16.46■□□□□ 0.23
USP44-203ENST00000537435 FANCLQ9NW38 375 aa16.46■□□□□ 0.23
USP44-203ENST00000537435 LRP2BPQ9P2M1 347 aa16.46■□□□□ 0.23
USP44-203ENST00000537435 TIAM2Q8IVF5 1701 aa16.46■□□□□ 0.22
USP44-203ENST00000537435 BMP6P22004 513 aa16.45■□□□□ 0.22
USP44-203ENST00000537435 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
USP44-203ENST00000537435 MDM2Q00987 491 aaPredicted RBP16.45■□□□□ 0.22
USP44-203ENST00000537435 PDE4BQ07343 736 aa16.45■□□□□ 0.22
USP44-203ENST00000537435 CCDC152Q4G0S7 254 aa16.45■□□□□ 0.22
USP44-203ENST00000537435 CRACR2BQ8N4Y2 399 aaPredicted RBP16.45■□□□□ 0.22
USP44-203ENST00000537435 NUP133Q8WUM0 1156 aa16.45■□□□□ 0.22
USP44-203ENST00000537435 PKNOX2Q96KN3 472 aa16.45■□□□□ 0.22
USP44-203ENST00000537435 FOXP1Q9H334 677 aaPredicted RBP16.45■□□□□ 0.22
USP44-203ENST00000537435 FBXO2Q9UK22 296 aaPredicted RBP16.45■□□□□ 0.22
USP44-203ENST00000537435 DEXIO95424 95 aa16.45■□□□□ 0.22
USP44-203ENST00000537435 PTPREP23469 700 aa16.45■□□□□ 0.22
USP44-203ENST00000537435 NR5A1Q13285 461 aa16.45■□□□□ 0.22
USP44-203ENST00000537435 RILPL1Q5EBL4 403 aa16.45■□□□□ 0.22
USP44-203ENST00000537435 INTS5Q6P9B9 1019 aaKnown RBP16.45■□□□□ 0.22
USP44-203ENST00000537435 PRDM4Q9UKN5 801 aa16.45■□□□□ 0.22
USP44-203ENST00000537435 DOCK2Q92608 1830 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 CCDC196A0A1B0GTZ2 297 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 TMEM232C9JQI7 657 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 VSTM4Q8IW00 320 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 ELOA2Q8IYF1 753 aaPredicted RBP16.44■□□□□ 0.22
USP44-203ENST00000537435 ZNF654Q8IZM8 581 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 TMTC2Q8N394 836 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 RNF41Q9H4P4 317 aaPredicted RBP16.44■□□□□ 0.22
USP44-203ENST00000537435 OGFRQ9NZT2 677 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 HOOK1Q9UJC3 728 aaKnown RBP16.44■□□□□ 0.22
USP44-203ENST00000537435 PCDHB6Q9Y5E3 794 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 A0A0G2JS52 829 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 PPARAQ07869 468 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 POSTNQ15063 836 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 ELF2Q15723 593 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 PTPN21Q16825 1174 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 FANCBQ8NB91 859 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 CCDC87Q9NVE4 849 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 MAN1B1Q9UKM7 699 aa16.44■□□□□ 0.22
USP44-203ENST00000537435 POLR2DO15514 142 aaKnown RBP16.43■□□□□ 0.22
USP44-203ENST00000537435 MYO1BO43795 1136 aa16.43■□□□□ 0.22
USP44-203ENST00000537435 TOP1P11387 765 aaKnown RBP16.43■□□□□ 0.22
USP44-203ENST00000537435 CHRNDQ07001 517 aa16.43■□□□□ 0.22
USP44-203ENST00000537435 SDR42E1Q8WUS8 393 aa16.43■□□□□ 0.22
USP44-203ENST00000537435 UBAC1Q9BSL1 405 aa16.43■□□□□ 0.22
USP44-203ENST00000537435 MTA3Q9BTC8 594 aa16.43■□□□□ 0.22
USP44-203ENST00000537435 SERTAD1Q9UHV2 236 aa16.43■□□□□ 0.22
USP44-203ENST00000537435 IQSEC3Q9UPP2 1182 aaPredicted RBP16.43■□□□□ 0.22
USP44-203ENST00000537435 PRR29P0C7W0 189 aa16.43■□□□□ 0.22
USP44-203ENST00000537435 ATP2B1P20020 1258 aa16.43■□□□□ 0.22
USP44-203ENST00000537435 CYP7A1P22680 504 aa16.43■□□□□ 0.22
USP44-203ENST00000537435 CRKLP46109 303 aaKnown RBP16.43■□□□□ 0.22
USP44-203ENST00000537435 DMTNQ08495 405 aa16.43■□□□□ 0.22
USP44-203ENST00000537435 ZNF397Q8NF99 534 aaPredicted RBP16.43■□□□□ 0.22
USP44-203ENST00000537435 OXER1Q8TDS5 423 aa16.43■□□□□ 0.22
USP44-203ENST00000537435 L2HGDHQ9H9P8 463 aa16.43■□□□□ 0.22
USP44-203ENST00000537435 NHSL1Q5SYE7 1610 aa16.43■□□□□ 0.22
USP44-203ENST00000537435 MINDY4BA8MYZ0 360 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 CAMTA2O94983 1202 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 GOLGA8FQ08AF8 430 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 GOLGA8DPQ0D2H9 430 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 KMT5BQ4FZB7 885 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 PARP10Q53GL7 1025 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 HSP90AA4PQ58FG1 418 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 ADGRA1Q86SQ6 560 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 HOMER1Q86YM7 354 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 TMX1Q9H3N1 280 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 ATP6V1AP38606 617 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 RCAN1P53805 252 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 INTS13Q9NVM9 706 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 DDX41Q9UJV9 622 aaKnown RBP16.42■□□□□ 0.22
USP44-203ENST00000537435 NIP7Q9Y221 180 aaKnown RBP eCLIP16.42■□□□□ 0.22
USP44-203ENST00000537435 CHD4Q14839 1912 aa16.42■□□□□ 0.22
USP44-203ENST00000537435 CCP110O43303 1012 aa16.41■□□□□ 0.22
USP44-203ENST00000537435 NTSR2O95665 410 aa16.41■□□□□ 0.22
USP44-203ENST00000537435 TUBB4AP04350 444 aa16.41■□□□□ 0.22
USP44-203ENST00000537435 CABP5Q9NP86 173 aa16.41■□□□□ 0.22
USP44-203ENST00000537435 ABCF2Q9UG63 623 aa16.41■□□□□ 0.22
USP44-203ENST00000537435 SRPRBQ9Y5M8 271 aaKnown RBP16.41■□□□□ 0.22
USP44-203ENST00000537435 TNKSO95271 1327 aa16.41■□□□□ 0.22
USP44-203ENST00000537435 SMIM22K7EJ46 135 aa16.41■□□□□ 0.22
USP44-203ENST00000537435 FMR1Q06787 632 aaKnown RBP eCLIP16.41■□□□□ 0.22
USP44-203ENST00000537435 GRAMD1CQ8IYS0 662 aa16.41■□□□□ 0.22
USP44-203ENST00000537435 PDILTQ8N807 584 aa16.41■□□□□ 0.22
USP44-203ENST00000537435 ZNF579Q8NAF0 562 aaKnown RBP16.41■□□□□ 0.22
USP44-203ENST00000537435 SMARCE1Q969G3 411 aa16.41■□□□□ 0.22
USP44-203ENST00000537435 CEP131Q9UPN4 1083 aa16.41■□□□□ 0.22
USP44-203ENST00000537435 SARSP49591 514 aaKnown RBP16.4■□□□□ 0.22
USP44-203ENST00000537435 ETF1P62495 437 aaKnown RBP16.4■□□□□ 0.22
USP44-203ENST00000537435 SEC23AQ15436 765 aa16.4■□□□□ 0.22
USP44-203ENST00000537435 ZNF827Q17R98 1081 aa16.4■□□□□ 0.22
USP44-203ENST00000537435 CCDC93Q567U6 631 aa16.4■□□□□ 0.22
USP44-203ENST00000537435 UTP14CQ5TAP6 766 aaKnown RBP16.4■□□□□ 0.22
USP44-203ENST00000537435 NT5DC1Q5TFE4 455 aa16.4■□□□□ 0.22
USP44-203ENST00000537435 FBXO38Q6PIJ6 1188 aa16.4■□□□□ 0.22
USP44-203ENST00000537435 ESR2Q92731 530 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms