RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 MAP2K2P36507 400 aa12.27□□□□□ -0.45
LMO3-215ENST00000537304 USP14P54578 494 aa12.27□□□□□ -0.45
LMO3-215ENST00000537304 PPFIA1Q13136 1202 aa12.27□□□□□ -0.45
LMO3-215ENST00000537304 SAFBQ15424 915 aaKnown RBP eCLIP12.27□□□□□ -0.45
LMO3-215ENST00000537304 MICALCLQ6ZW33 695 aa12.27□□□□□ -0.45
LMO3-215ENST00000537304 VPS37DQ86XT2 251 aa12.27□□□□□ -0.45
LMO3-215ENST00000537304 COG1Q8WTW3 980 aa12.27□□□□□ -0.45
LMO3-215ENST00000537304 STAG1Q8WVM7 1258 aa12.27□□□□□ -0.45
LMO3-215ENST00000537304 ZNF622Q969S3 477 aaKnown RBP eCLIP12.27□□□□□ -0.45
LMO3-215ENST00000537304 RHOXF2Q9BQY4 288 aa12.27□□□□□ -0.45
LMO3-215ENST00000537304 ABCC12Q96J65 1359 aa12.27□□□□□ -0.45
LMO3-215ENST00000537304 PHRF1Q9P1Y6 1649 aaKnown RBP12.27□□□□□ -0.45
LMO3-215ENST00000537304 DDX60Q8IY21 1712 aaKnown RBP12.27□□□□□ -0.45
LMO3-215ENST00000537304 SOWAHDA6NJG2 315 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 GOLGA8KD6RF30 607 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 OPA1O60313 960 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 N4BP1O75113 896 aaKnown RBP12.26□□□□□ -0.45
LMO3-215ENST00000537304 PRPF6O94906 941 aaKnown RBP12.26□□□□□ -0.45
LMO3-215ENST00000537304 CCDC172P0C7W6 258 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 RFX5P48382 616 aaPredicted RBP12.26□□□□□ -0.45
LMO3-215ENST00000537304 SARSP49591 514 aaKnown RBP12.26□□□□□ -0.45
LMO3-215ENST00000537304 MDM2Q00987 491 aaPredicted RBP12.26□□□□□ -0.45
LMO3-215ENST00000537304 PTPN12Q05209 780 aaKnown RBP12.26□□□□□ -0.45
LMO3-215ENST00000537304 GOLGA8FQ08AF8 430 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 GOLGA8DPQ0D2H9 430 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 LONRF3Q496Y0 759 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 ESCO1Q5FWF5 840 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 SLC35F6Q8N357 371 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 MAP3K14Q99558 947 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 DBNDD2Q9BQY9 259 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 LGR6Q9HBX8 967 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 HPCAL4Q9UM19 191 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.26□□□□□ -0.45
LMO3-215ENST00000537304 CDHR2Q9BYE9 1310 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 STK36Q9NRP7 1315 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 TMEM94Q12767 1356 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 KIF28PB7ZC32 967 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 GOLIM4O00461 696 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 CLSTN1O94985 981 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 MB21D2Q8IYB1 491 aaPredicted RBP12.26□□□□□ -0.45
LMO3-215ENST00000537304 ABTB2Q8N961 1025 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 ZFP91Q96JP5 570 aaPredicted RBP12.26□□□□□ -0.45
LMO3-215ENST00000537304 DONSONQ9NYP3 566 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 HPS5Q9UPZ3 1129 aa12.26□□□□□ -0.45
LMO3-215ENST00000537304 MAST3O60307 1309 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 C4AP0C0L4 1744 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 C4BP0C0L5 1744 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 STRCP1A6NGW2 1772 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 LOC102724159A0A0B4J2E5 919 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 KDM4FA0A1W2PPD8 638 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 LRRIQ3A6PVS8 624 aaPredicted RBP12.25□□□□□ -0.45
LMO3-215ENST00000537304 PSMD14O00487 310 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 KIAA0754O94854 1291 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 IGKV5-2P06315 115 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 INPP5BP32019 993 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 PBX1P40424 430 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 RBL2Q08999 1139 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 PWP2Q15269 919 aaKnown RBP12.25□□□□□ -0.45
LMO3-215ENST00000537304 KRT40Q6A162 431 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 OTUD7BQ6GQQ9 843 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 FOXR1Q6PIV2 292 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 RAD9BQ6WBX8 426 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 ZNF662Q6ZS27 426 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 PAXIP1Q6ZW49 1069 aaPredicted RBP12.25□□□□□ -0.45
LMO3-215ENST00000537304 LTV1Q96GA3 475 aaPredicted RBP12.25□□□□□ -0.45
LMO3-215ENST00000537304 CXorf56Q9H5V9 222 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 HAUS4Q9H6D7 363 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 CEP83Q9Y592 693 aa12.25□□□□□ -0.45
LMO3-215ENST00000537304 LTN1O94822 1766 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 GOLGA6CA6NDK9 693 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 KCNQ3O43525 872 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 SYF2O95926 243 aaKnown RBP12.24□□□□□ -0.45
LMO3-215ENST00000537304 GOLGA6DP0CG33 693 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 IL15P40933 162 aaPredicted RBP12.24□□□□□ -0.45
LMO3-215ENST00000537304 ARHGAP25P42331 645 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 METAP2P50579 478 aaKnown RBP eCLIP12.24□□□□□ -0.45
LMO3-215ENST00000537304 MNAT1P51948 309 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 AMPD2Q01433 879 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 PDE4BQ07343 736 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 WASHC4Q2M389 1173 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 PROSER3Q2NL68 480 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 RILPL1Q5EBL4 403 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 NBPF6Q5VWK0 638 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 UBE3BQ7Z3V4 1068 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 NBPF4Q96M43 638 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 PYM1Q9BRP8 204 aaKnown RBP12.24□□□□□ -0.45
LMO3-215ENST00000537304 TOMM22Q9NS69 142 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 GOLGA6AQ9NYA3 693 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 ADD3Q9UEY8 706 aaKnown RBP12.24□□□□□ -0.45
LMO3-215ENST00000537304 TBC1D2BQ9UPU7 963 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 SYNRGQ9UMZ2 1314 aa12.24□□□□□ -0.45
LMO3-215ENST00000537304 SIPA1L3O60292 1781 aaPredicted RBP12.24□□□□□ -0.45
LMO3-215ENST00000537304 TMCO5BA8MYB1 307 aa12.23□□□□□ -0.45
LMO3-215ENST00000537304 PHACTR2O75167 634 aa12.23□□□□□ -0.45
LMO3-215ENST00000537304 APPP05067 770 aa12.23□□□□□ -0.45
LMO3-215ENST00000537304 PTPREP23469 700 aa12.23□□□□□ -0.45
LMO3-215ENST00000537304 AKAP17AQ02040 695 aaKnown RBP12.23□□□□□ -0.45
LMO3-215ENST00000537304 TSR1Q2NL82 804 aaKnown RBP12.23□□□□□ -0.45
LMO3-215ENST00000537304 TRAPPC11Q7Z392 1133 aa12.23□□□□□ -0.45
LMO3-215ENST00000537304 AMOTL1Q8IY63 956 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms