RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 RIPOR2Q9Y4F9 1068 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 ERCC6L2Q5T890 1561 aa6.06□□□□□ -1.44
PTPRD-213ENST00000537002 PCK1P35558 622 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 ADKP55263 362 aaKnown RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 PTPN21Q16825 1174 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 REXO1L1PQ8IX06 675 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 AIDAQ96BJ3 306 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 CNNM1Q9NRU3 951 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 BTBD11A6QL63 1104 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 IFIT1P09914 478 aaKnown RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 VAV2P52735 878 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 NLRP12P59046 1061 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 CCDC170Q8IYT3 715 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 FBXO41Q8TF61 875 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 SLC24A3Q9HC58 644 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 ODF2LQ9ULJ1 636 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 SAMM50Q9Y512 469 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 GNAT3A8MTJ3 354 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 LACTBP83111 547 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 ATP2B2Q01814 1243 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 BEND6Q5SZJ8 279 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 BCAS4Q8TDM0 211 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 UBLCP1Q8WVY7 318 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 DTNBP1Q96EV8 351 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 CCDC43Q96MW1 224 aaKnown RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 PANX2Q96RD6 677 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 CAPS2Q9BXY5 557 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 PRDM11Q9NQV5 511 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 TCEAL9Q9UHQ7 104 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 CASP8Q14790 479 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 OTUD7BQ6GQQ9 843 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 NBPF10Q6P3W6 841 aaKnown RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 ZNF530Q6P9A1 599 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 DDX46Q7L014 1031 aaKnown RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 VSTM4Q8IW00 320 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 MICAL1Q8TDZ2 1067 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 ALG1Q9BT22 464 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 SERPINA10Q9UK55 444 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 ATP7AQ04656 1500 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 TLDC2A0PJX2 215 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 KLHL33A6NCF5 533 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 SHOX2O60902 331 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 ARID5BQ14865 1188 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 ALS2CLQ60I27 953 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 TMTC1Q8IUR5 882 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 C1orf131Q8NDD1 294 aaKnown RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 OSBPL9Q96SU4 736 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 LSG1Q9H089 658 aaKnown RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 PHAXQ9H814 394 aaKnown RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 ZNF213O14771 459 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 HGSO14964 777 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 NR1I2O75469 434 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 CCT6AP40227 531 aaKnown RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 ATP1A2P50993 1020 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 C11orf57Q6ZUT1 292 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 PYM1Q9BRP8 204 aaKnown RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 NPHP4O75161 1426 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 MYCNP04198 464 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 SNCBQ16143 134 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 PLEKHO1Q53GL0 409 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-213ENST00000537002 TSG101Q99816 390 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 HINFPQ9BQA5 517 aa6.05□□□□□ -1.44
PTPRD-213ENST00000537002 SMTNP53814 917 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 ITIH3Q06033 890 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 PRPF38AQ8NAV1 312 aaKnown RBP6.04□□□□□ -1.44
PTPRD-213ENST00000537002 CTNNBL1Q8WYA6 563 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-213ENST00000537002 TBC1D31Q96DN5 1066 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 MYD88Q99836 296 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 ZC3H13Q5T200 1668 aaKnown RBP6.04□□□□□ -1.44
PTPRD-213ENST00000537002 A0A087WWV3 80 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 USP27XA6NNY8 438 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 RPSAP08865 295 aaKnown RBP6.04□□□□□ -1.44
PTPRD-213ENST00000537002 KIF5AQ12840 1032 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 E2F5Q15329 346 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 LMNTD2Q8IXW0 634 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 WDR66Q8TBY9 1149 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 N4BP2L2Q92802 583 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-213ENST00000537002 PAGR1Q9BTK6 254 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 PPP1R12CQ9BZL4 782 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 FAM169AQ9Y6X4 670 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 CHL1O00533 1208 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 AP5Z1O43299 807 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 EMBQ6PCB8 327 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 GPIHBP1Q8IV16 184 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 CCDC155Q8N6L0 562 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 MIPOL1Q8TD10 442 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 SNRKQ9NRH2 765 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 PA2G4Q9UQ80 394 aaKnown RBP6.04□□□□□ -1.44
PTPRD-213ENST00000537002 ARHGEF40Q8TER5 1519 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 RNF40O75150 1001 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 NBPF14Q5TI25 921 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 WWC2Q6AWC2 1192 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 C8orf74Q6P047 294 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 SAMD1Q6SPF0 538 aaPredicted RBP6.04□□□□□ -1.44
PTPRD-213ENST00000537002 SSH3Q8TE77 659 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 RPS6KB1P23443 525 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 CCDC40Q4G0X9 1142 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 TRMT44Q8IYL2 757 aaKnown RBP6.04□□□□□ -1.44
PTPRD-213ENST00000537002 RAPGEF4Q8WZA2 1011 aa6.04□□□□□ -1.44
PTPRD-213ENST00000537002 TEX13AQ9BXU3 409 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms