RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PCDHB5Q9Y5E4 795 aa9.14□□□□□ -0.95
CLIP1-207ENST00000536634 CSADQ9Y600 493 aa9.14□□□□□ -0.95
CLIP1-207ENST00000536634 TSPOAP1O95153 1857 aa9.14□□□□□ -0.95
CLIP1-207ENST00000536634 FHAD1B1AJZ9 1412 aa9.14□□□□□ -0.95
CLIP1-207ENST00000536634 DCDC2CA8MYV0 355 aa9.13□□□□□ -0.95
CLIP1-207ENST00000536634 F6X3S4 739 aa9.13□□□□□ -0.95
CLIP1-207ENST00000536634 HCLS1P14317 486 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-207ENST00000536634 ADMP35318 185 aa9.13□□□□□ -0.95
CLIP1-207ENST00000536634 LIG3P49916 1009 aa9.13□□□□□ -0.95
CLIP1-207ENST00000536634 MRPL58Q14197 206 aaKnown RBP9.13□□□□□ -0.95
CLIP1-207ENST00000536634 SLC51AQ86UW1 340 aa9.13□□□□□ -0.95
CLIP1-207ENST00000536634 FBXL6Q8N531 539 aa9.13□□□□□ -0.95
CLIP1-207ENST00000536634 SHKBP1Q8TBC3 707 aa9.13□□□□□ -0.95
CLIP1-207ENST00000536634 PIDD1Q9HB75 910 aa9.13□□□□□ -0.95
CLIP1-207ENST00000536634 TGFB1P01137 390 aa9.12□□□□□ -0.95
CLIP1-207ENST00000536634 RPS26P62854 115 aaKnown RBP9.12□□□□□ -0.95
CLIP1-207ENST00000536634 ERVK-24P63145 666 aa9.12□□□□□ -0.95
CLIP1-207ENST00000536634 SEPT6Q14141 434 aa9.12□□□□□ -0.95
CLIP1-207ENST00000536634 MAP7Q14244 749 aa9.12□□□□□ -0.95
CLIP1-207ENST00000536634 SEZ6L2Q6UXD5 910 aa9.12□□□□□ -0.95
CLIP1-207ENST00000536634 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-207ENST00000536634 AGMOQ6ZNB7 445 aa9.12□□□□□ -0.95
CLIP1-207ENST00000536634 NOC4LQ9BVI4 516 aaKnown RBP9.12□□□□□ -0.95
CLIP1-207ENST00000536634 RNF112Q9ULX5 631 aa9.12□□□□□ -0.95
CLIP1-207ENST00000536634 TLR6Q9Y2C9 796 aa9.12□□□□□ -0.95
CLIP1-207ENST00000536634 RUSC2Q8N2Y8 1516 aa9.11□□□□□ -0.95
CLIP1-207ENST00000536634 F13BP05160 661 aa9.11□□□□□ -0.95
CLIP1-207ENST00000536634 TFE3P19532 575 aaPredicted RBP9.11□□□□□ -0.95
CLIP1-207ENST00000536634 CDK8P49336 464 aa9.11□□□□□ -0.95
CLIP1-207ENST00000536634 INPP5AQ14642 412 aa9.11□□□□□ -0.95
CLIP1-207ENST00000536634 PPM1JQ5JR12 505 aa9.11□□□□□ -0.95
CLIP1-207ENST00000536634 SCARA3Q6AZY7 606 aa9.11□□□□□ -0.95
CLIP1-207ENST00000536634 C12orf40Q86WS4 652 aa9.11□□□□□ -0.95
CLIP1-207ENST00000536634 GATA6Q92908 595 aa9.11□□□□□ -0.95
CLIP1-207ENST00000536634 C1GALT1Q9NS00 363 aa9.11□□□□□ -0.95
CLIP1-207ENST00000536634 PRR19A6NJB7 356 aa9.1□□□□□ -0.95
CLIP1-207ENST00000536634 WDR64B1ANS9 1081 aa9.1□□□□□ -0.95
CLIP1-207ENST00000536634 RNGTTO60942 597 aaKnown RBP9.1□□□□□ -0.95
CLIP1-207ENST00000536634 LRFN4Q6PJG9 635 aa9.1□□□□□ -0.95
CLIP1-207ENST00000536634 ZAR1Q86SH2 424 aa9.1□□□□□ -0.95
CLIP1-207ENST00000536634 SMYD4Q8IYR2 804 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-207ENST00000536634 ISL2Q96A47 359 aa9.1□□□□□ -0.95
CLIP1-207ENST00000536634 TBC1D32Q96NH3 1257 aa9.1□□□□□ -0.95
CLIP1-207ENST00000536634 WRNQ14191 1432 aaPredicted RBP eCLIP9.1□□□□□ -0.95
CLIP1-207ENST00000536634 ERICH3Q5RHP9 1530 aa9.1□□□□□ -0.95
CLIP1-207ENST00000536634 NTF4P34130 210 aa9.09□□□□□ -0.95
CLIP1-207ENST00000536634 RING1Q06587 406 aa9.09□□□□□ -0.95
CLIP1-207ENST00000536634 UBE3DQ7Z6J8 389 aa9.09□□□□□ -0.95
CLIP1-207ENST00000536634 RNF214Q8ND24 703 aa9.09□□□□□ -0.95
CLIP1-207ENST00000536634 FAM170BA6NMN3 283 aa9.08□□□□□ -0.96
CLIP1-207ENST00000536634 PHC3Q8NDX5 983 aa9.08□□□□□ -0.96
CLIP1-207ENST00000536634 ELMO3Q96BJ8 720 aa9.08□□□□□ -0.96
CLIP1-207ENST00000536634 PLPPR2Q96GM1 343 aa9.08□□□□□ -0.96
CLIP1-207ENST00000536634 KRTAP9-9Q9BYP9 154 aa9.08□□□□□ -0.96
CLIP1-207ENST00000536634 KRTAP9-4Q9BYQ2 154 aa9.08□□□□□ -0.96
CLIP1-207ENST00000536634 BIVM-ERCC5R4GMW8 1640 aa9.08□□□□□ -0.96
CLIP1-207ENST00000536634 ADGRL1O94910 1474 aa9.08□□□□□ -0.96
CLIP1-207ENST00000536634 HECW2Q9P2P5 1572 aa9.07□□□□□ -0.96
CLIP1-207ENST00000536634 TOP2BQ02880 1626 aa9.07□□□□□ -0.96
CLIP1-207ENST00000536634 RBM47A0AV96 593 aaKnown RBP9.07□□□□□ -0.96
CLIP1-207ENST00000536634 CDK5R2Q13319 367 aa9.07□□□□□ -0.96
CLIP1-207ENST00000536634 LDLRAD1Q5T700 205 aa9.07□□□□□ -0.96
CLIP1-207ENST00000536634 SCO2A0A1W2PP80 73 aa9.06□□□□□ -0.96
CLIP1-207ENST00000536634 MED26O95402 600 aa9.06□□□□□ -0.96
CLIP1-207ENST00000536634 RLBP1P12271 317 aa9.06□□□□□ -0.96
CLIP1-207ENST00000536634 LMNB1P20700 586 aa9.06□□□□□ -0.96
CLIP1-207ENST00000536634 SSTR4P31391 388 aa9.06□□□□□ -0.96
CLIP1-207ENST00000536634 ITGAEP38570 1179 aa9.06□□□□□ -0.96
CLIP1-207ENST00000536634 WIPI1Q5MNZ9 446 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-207ENST00000536634 ZBTB37Q5TC79 503 aa9.06□□□□□ -0.96
CLIP1-207ENST00000536634 MIR1-1HGQ9H1L0 117 aa9.06□□□□□ -0.96
CLIP1-207ENST00000536634 PPRC1Q5VV67 1664 aaKnown RBP9.06□□□□□ -0.96
CLIP1-207ENST00000536634 PRAMEF27A3QJZ7 478 aa9.05□□□□□ -0.96
CLIP1-207ENST00000536634 BTBD11A6QL63 1104 aa9.05□□□□□ -0.96
CLIP1-207ENST00000536634 CYFIP1Q7L576 1253 aa9.05□□□□□ -0.96
CLIP1-207ENST00000536634 SSU72Q9NP77 194 aaKnown RBP9.05□□□□□ -0.96
CLIP1-207ENST00000536634 PICK1Q9NRD5 415 aa9.05□□□□□ -0.96
CLIP1-207ENST00000536634 ATG3Q9NT62 314 aa9.05□□□□□ -0.96
CLIP1-207ENST00000536634 PCOLCE2Q9UKZ9 415 aa9.05□□□□□ -0.96
CLIP1-207ENST00000536634 HOXA10P31260 410 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-207ENST00000536634 CD97P48960 835 aa9.04□□□□□ -0.96
CLIP1-207ENST00000536634 LRP8Q14114 963 aa9.04□□□□□ -0.96
CLIP1-207ENST00000536634 ZNF765Q7L2R6 523 aa9.04□□□□□ -0.96
CLIP1-207ENST00000536634 HDXQ7Z353 690 aa9.04□□□□□ -0.96
CLIP1-207ENST00000536634 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.04□□□□□ -0.96
CLIP1-207ENST00000536634 RGS22Q8NE09 1264 aa9.04□□□□□ -0.96
CLIP1-207ENST00000536634 JARID2Q92833 1246 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-207ENST00000536634 RHOVQ96L33 236 aa9.04□□□□□ -0.96
CLIP1-207ENST00000536634 OSBPL1AQ9BXW6 950 aa9.04□□□□□ -0.96
CLIP1-207ENST00000536634 COPRSQ9NQ92 184 aa9.04□□□□□ -0.96
CLIP1-207ENST00000536634 GFRA2O00451 464 aa9.03□□□□□ -0.96
CLIP1-207ENST00000536634 FANCGO15287 622 aa9.03□□□□□ -0.96
CLIP1-207ENST00000536634 HYAL3O43820 417 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-207ENST00000536634 PF4P02776 101 aa9.03□□□□□ -0.96
CLIP1-207ENST00000536634 GBP2P32456 591 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-207ENST00000536634 ARTNQ5T4W7 220 aa9.03□□□□□ -0.96
CLIP1-207ENST00000536634 BNC2Q6ZN30 1099 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-207ENST00000536634 ERMP1Q7Z2K6 904 aa9.03□□□□□ -0.96
CLIP1-207ENST00000536634 TMEM74Q96NL1 305 aa9.03□□□□□ -0.96
CLIP1-207ENST00000536634 RSRP1Q9BUV0 290 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms