RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 ZSCAN10Q96SZ4 725 aaPredicted RBP26.45■■□□□ 1.82
HMGA2-206ENST00000536545 TSPY26PQ9H489 355 aa26.45■■□□□ 1.82
HMGA2-206ENST00000536545 GJB4Q9NTQ9 266 aa26.45■■□□□ 1.82
HMGA2-206ENST00000536545 RCOR1Q9UKL0 485 aa26.45■■□□□ 1.82
HMGA2-206ENST00000536545 ROBO3Q96MS0 1386 aa26.44■■□□□ 1.82
HMGA2-206ENST00000536545 PRDM1O75626 825 aa26.44■■□□□ 1.82
HMGA2-206ENST00000536545 FMNL1O95466 1100 aaPredicted RBP26.44■■□□□ 1.82
HMGA2-206ENST00000536545 LDHCP07864 332 aa26.44■■□□□ 1.82
HMGA2-206ENST00000536545 IARSP41252 1262 aaKnown RBP26.44■■□□□ 1.82
HMGA2-206ENST00000536545 AIFM3Q96NN9 605 aa26.44■■□□□ 1.82
HMGA2-206ENST00000536545 FTOQ9C0B1 505 aaKnown RBP eCLIP26.44■■□□□ 1.82
HMGA2-206ENST00000536545 ANO8Q9HCE9 1232 aaPredicted RBP26.44■■□□□ 1.82
HMGA2-206ENST00000536545 CDK5RAP2Q96SN8 1893 aa26.44■■□□□ 1.82
HMGA2-206ENST00000536545 BAG3O95817 575 aa26.43■■□□□ 1.82
HMGA2-206ENST00000536545 LIG1P18858 919 aa26.43■■□□□ 1.82
HMGA2-206ENST00000536545 KIF23Q02241 960 aaPredicted RBP26.43■■□□□ 1.82
HMGA2-206ENST00000536545 BRAPQ7Z569 592 aa26.43■■□□□ 1.82
HMGA2-206ENST00000536545 TBC1D22AQ8WUA7 517 aa26.43■■□□□ 1.82
HMGA2-206ENST00000536545 SLC3A2P08195 630 aaKnown RBP26.43■■□□□ 1.82
HMGA2-206ENST00000536545 CERS3Q8IU89 383 aa26.43■■□□□ 1.82
HMGA2-206ENST00000536545 MASTLQ96GX5 879 aa26.43■■□□□ 1.82
HMGA2-206ENST00000536545 KIF28PB7ZC32 967 aa26.42■■□□□ 1.82
HMGA2-206ENST00000536545 ALDH1B1P30837 517 aa26.42■■□□□ 1.82
HMGA2-206ENST00000536545 MFSD14BQ5SR56 506 aa26.42■■□□□ 1.82
HMGA2-206ENST00000536545 MCM9Q9NXL9 1143 aa26.42■■□□□ 1.82
HMGA2-206ENST00000536545 USP17L8P0C7I0 530 aa26.41■■□□□ 1.82
HMGA2-206ENST00000536545 NOL10Q9BSC4 688 aaKnown RBP26.41■■□□□ 1.82
HMGA2-206ENST00000536545 COA1Q9GZY4 146 aa26.41■■□□□ 1.82
HMGA2-206ENST00000536545 CCDC196A0A1B0GTZ2 297 aa26.41■■□□□ 1.82
HMGA2-206ENST00000536545 GOLGA6L4A6NEF3 574 aa26.41■■□□□ 1.82
HMGA2-206ENST00000536545 USP5P45974 858 aa26.41■■□□□ 1.82
HMGA2-206ENST00000536545 SSRP1Q08945 709 aaKnown RBP26.41■■□□□ 1.82
HMGA2-206ENST00000536545 C12orf60Q5U649 245 aa26.41■■□□□ 1.82
HMGA2-206ENST00000536545 IQCA1Q86XH1 822 aa26.41■■□□□ 1.82
HMGA2-206ENST00000536545 SLC26A6Q9BXS9 759 aa26.41■■□□□ 1.82
HMGA2-206ENST00000536545 GAKO14976 1311 aa26.4■■□□□ 1.82
HMGA2-206ENST00000536545 GPR75-ASB3A0A0A6YYF3 556 aa26.4■■□□□ 1.82
HMGA2-206ENST00000536545 CEBPZQ03701 1054 aaKnown RBP26.4■■□□□ 1.82
HMGA2-206ENST00000536545 KRT40Q6A162 431 aa26.4■■□□□ 1.82
HMGA2-206ENST00000536545 OLFM4Q6UX06 510 aa26.4■■□□□ 1.82
HMGA2-206ENST00000536545 NBPF11Q86T75 865 aa26.4■■□□□ 1.82
HMGA2-206ENST00000536545 MPNDQ8N594 471 aa26.4■■□□□ 1.82
HMGA2-206ENST00000536545 FANCBQ8NB91 859 aa26.4■■□□□ 1.82
HMGA2-206ENST00000536545 CAMKK2Q96RR4 588 aa26.4■■□□□ 1.82
HMGA2-206ENST00000536545 RTEL1Q9NZ71 1219 aa26.4■■□□□ 1.82
HMGA2-206ENST00000536545 BTDP43251 543 aa26.39■■□□□ 1.82
HMGA2-206ENST00000536545 NT5C2P49902 561 aa26.39■■□□□ 1.82
HMGA2-206ENST00000536545 PDE4BQ07343 736 aa26.39■■□□□ 1.82
HMGA2-206ENST00000536545 IFIT1BQ5T764 474 aaKnown RBP26.39■■□□□ 1.82
HMGA2-206ENST00000536545 MYSM1Q5VVJ2 828 aa26.39■■□□□ 1.82
HMGA2-206ENST00000536545 FAM163AQ96GL9 167 aaPredicted RBP26.39■■□□□ 1.82
HMGA2-206ENST00000536545 PPP2R5BQ15173 497 aa26.38■■□□□ 1.81
HMGA2-206ENST00000536545 WASF1Q92558 559 aa26.38■■□□□ 1.81
HMGA2-206ENST00000536545 FUCA2Q9BTY2 467 aa26.38■■□□□ 1.81
HMGA2-206ENST00000536545 UBE2Q2LH0YL09 131 aa26.38■■□□□ 1.81
HMGA2-206ENST00000536545 SLC15A2Q16348 729 aa26.38■■□□□ 1.81
HMGA2-206ENST00000536545 BICD2Q8TD16 824 aa26.38■■□□□ 1.81
HMGA2-206ENST00000536545 NUP133Q8WUM0 1156 aa26.38■■□□□ 1.81
HMGA2-206ENST00000536545 DDX19AQ9NUU7 478 aaKnown RBP26.38■■□□□ 1.81
HMGA2-206ENST00000536545 EZH2Q15910 746 aaKnown RBP26.37■■□□□ 1.81
HMGA2-206ENST00000536545 DPP8Q6V1X1 898 aaPredicted RBP26.37■■□□□ 1.81
HMGA2-206ENST00000536545 CRACR2BQ8N4Y2 399 aaPredicted RBP26.37■■□□□ 1.81
HMGA2-206ENST00000536545 POLR3EQ9NVU0 708 aa26.37■■□□□ 1.81
HMGA2-206ENST00000536545 RIMBP2O15034 1052 aa26.36■■□□□ 1.81
HMGA2-206ENST00000536545 DDAH1O94760 285 aa26.36■■□□□ 1.81
HMGA2-206ENST00000536545 CATIPQ7Z7H3 387 aa26.36■■□□□ 1.81
HMGA2-206ENST00000536545 SLF2Q8IX21 1173 aa26.36■■□□□ 1.81
HMGA2-206ENST00000536545 TRIM22Q8IYM9 498 aa26.36■■□□□ 1.81
HMGA2-206ENST00000536545 TGFBRAP1Q8WUH2 860 aa26.36■■□□□ 1.81
HMGA2-206ENST00000536545 NUP62CLQ9H1M0 184 aa26.36■■□□□ 1.81
HMGA2-206ENST00000536545 DACT1Q9NYF0 836 aa26.36■■□□□ 1.81
HMGA2-206ENST00000536545 POLR3DP05423 398 aaPredicted RBP26.35■■□□□ 1.81
HMGA2-206ENST00000536545 GUCY1A2P33402 732 aa26.35■■□□□ 1.81
HMGA2-206ENST00000536545 GTF2IP78347 998 aa26.35■■□□□ 1.81
HMGA2-206ENST00000536545 C2CD5Q86YS7 1000 aa26.35■■□□□ 1.81
HMGA2-206ENST00000536545 SUGT1Q9Y2Z0 365 aa26.35■■□□□ 1.81
HMGA2-206ENST00000536545 FOCADQ5VW36 1801 aa26.35■■□□□ 1.81
HMGA2-206ENST00000536545 YEATS4O95619 227 aa26.35■■□□□ 1.81
HMGA2-206ENST00000536545 PLCG2P16885 1265 aa26.35■■□□□ 1.81
HMGA2-206ENST00000536545 RHBDL3P58872 404 aa26.35■■□□□ 1.81
HMGA2-206ENST00000536545 TROAPQ12815 778 aa26.35■■□□□ 1.81
HMGA2-206ENST00000536545 TRIM29Q14134 588 aa26.35■■□□□ 1.81
HMGA2-206ENST00000536545 FAM47AQ5JRC9 791 aa26.35■■□□□ 1.81
HMGA2-206ENST00000536545 STYK1Q6J9G0 422 aa26.35■■□□□ 1.81
HMGA2-206ENST00000536545 CLSTN2Q9H4D0 955 aa26.35■■□□□ 1.81
HMGA2-206ENST00000536545 DEXIO95424 95 aa26.34■■□□□ 1.81
HMGA2-206ENST00000536545 CALM1P0DP23 149 aa26.34■■□□□ 1.81
HMGA2-206ENST00000536545 CALM2P0DP24 149 aa26.34■■□□□ 1.81
HMGA2-206ENST00000536545 CALM3P0DP25 149 aa26.34■■□□□ 1.81
HMGA2-206ENST00000536545 EN1Q05925 392 aaPredicted RBP26.34■■□□□ 1.81
HMGA2-206ENST00000536545 CCDC173Q0VFZ6 552 aa26.34■■□□□ 1.81
HMGA2-206ENST00000536545 LINC00301Q8NCQ3 95 aa26.34■■□□□ 1.81
HMGA2-206ENST00000536545 PPP1R9BQ96SB3 815 aa26.34■■□□□ 1.81
HMGA2-206ENST00000536545 ZC3H12CQ9C0D7 883 aaKnown RBP26.34■■□□□ 1.81
HMGA2-206ENST00000536545 CLIC4Q9Y696 253 aa26.34■■□□□ 1.81
HMGA2-206ENST00000536545 NMT2O60551 498 aa26.33■■□□□ 1.81
HMGA2-206ENST00000536545 NR1I2O75469 434 aa26.33■■□□□ 1.81
HMGA2-206ENST00000536545 U2AF2P26368 475 aaKnown RBP eCLIP26.33■■□□□ 1.817e-8■■□□□ 13.4
HMGA2-206ENST00000536545 FUT2Q10981 343 aa26.33■■□□□ 1.81
HMGA2-206ENST00000536545 SLC4A8Q2Y0W8 1093 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 9286.1 ms