RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 TBC1D12O60347 775 aa19.95■□□□□ 0.78
ATL3-202ENST00000535789 PDE6AP16499 860 aa19.95■□□□□ 0.78
ATL3-202ENST00000535789 ATP5JP18859 108 aa19.95■□□□□ 0.78
ATL3-202ENST00000535789 BOLA2Q9H3K6 86 aa19.95■□□□□ 0.78
ATL3-202ENST00000535789 BTBD19C9JJ37 291 aa19.94■□□□□ 0.78
ATL3-202ENST00000535789 BAG3O95817 575 aa19.94■□□□□ 0.78
ATL3-202ENST00000535789 TSHZ3Q63HK5 1081 aa19.94■□□□□ 0.78
ATL3-202ENST00000535789 PLCG2P16885 1265 aa19.93■□□□□ 0.78
ATL3-202ENST00000535789 PTPRAP18433 802 aa19.93■□□□□ 0.78
ATL3-202ENST00000535789 JAG1P78504 1218 aa19.93■□□□□ 0.78
ATL3-202ENST00000535789 MAP3K12Q12852 859 aa19.93■□□□□ 0.78
ATL3-202ENST00000535789 SHROOM1Q2M3G4 852 aaPredicted RBP19.93■□□□□ 0.78
ATL3-202ENST00000535789 CTU1Q7Z7A3 348 aaKnown RBP19.93■□□□□ 0.78
ATL3-202ENST00000535789 HAUS7Q99871 368 aa19.93■□□□□ 0.78
ATL3-202ENST00000535789 NOL10Q9BSC4 688 aaKnown RBP19.93■□□□□ 0.78
ATL3-202ENST00000535789 PAG1Q9NWQ8 432 aa19.93■□□□□ 0.78
ATL3-202ENST00000535789 TNRC18O15417 2968 aaPredicted RBP19.93■□□□□ 0.78
ATL3-202ENST00000535789 ZNF532Q9HCE3 1301 aa19.93■□□□□ 0.78
ATL3-202ENST00000535789 RBBP6Q7Z6E9 1792 aaKnown RBP19.93■□□□□ 0.78
ATL3-202ENST00000535789 FKTNO75072 461 aa19.92■□□□□ 0.78
ATL3-202ENST00000535789 CETPP11597 493 aa19.92■□□□□ 0.78
ATL3-202ENST00000535789 EVX2Q03828 476 aa19.92■□□□□ 0.78
ATL3-202ENST00000535789 SNAPC2Q13487 334 aa19.92■□□□□ 0.78
ATL3-202ENST00000535789 SLC4A8Q2Y0W8 1093 aa19.92■□□□□ 0.78
ATL3-202ENST00000535789 SAP30BPQ9UHR5 308 aaKnown RBP19.92■□□□□ 0.78
ATL3-202ENST00000535789 PALD1Q9ULE6 856 aa19.92■□□□□ 0.78
ATL3-202ENST00000535789 ADGRA2Q96PE1 1338 aa19.92■□□□□ 0.78
ATL3-202ENST00000535789 CTNND1O60716 968 aaKnown RBP19.91■□□□□ 0.78
ATL3-202ENST00000535789 TTF1Q15361 905 aaPredicted RBP19.91■□□□□ 0.78
ATL3-202ENST00000535789 TAF1CQ15572 869 aaPredicted RBP19.91■□□□□ 0.78
ATL3-202ENST00000535789 SLC9C2Q5TAH2 1124 aa19.91■□□□□ 0.78
ATL3-202ENST00000535789 METTL16Q86W50 562 aaKnown RBP19.91■□□□□ 0.78
ATL3-202ENST00000535789 OTUD7AQ8TE49 926 aaPredicted RBP19.91■□□□□ 0.78
ATL3-202ENST00000535789 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.91■□□□□ 0.78
ATL3-202ENST00000535789 AFG3L2Q9Y4W6 797 aa19.91■□□□□ 0.78
ATL3-202ENST00000535789 DOCK3Q8IZD9 2030 aa19.91■□□□□ 0.78
ATL3-202ENST00000535789 GPAT2Q6NUI2 795 aa19.9■□□□□ 0.78
ATL3-202ENST00000535789 LCORLQ8N3X6 602 aa19.9■□□□□ 0.78
ATL3-202ENST00000535789 A0A0G2JLL6 359 aaPredicted RBP19.89■□□□□ 0.77
ATL3-202ENST00000535789 ADD2P35612 726 aa19.89■□□□□ 0.77
ATL3-202ENST00000535789 PARP14Q460N5 1801 aa19.89■□□□□ 0.77
ATL3-202ENST00000535789 OTUD7BQ6GQQ9 843 aa19.89■□□□□ 0.77
ATL3-202ENST00000535789 PRRT2Q7Z6L0 340 aaPredicted RBP19.89■□□□□ 0.77
ATL3-202ENST00000535789 SALL3Q9BXA9 1300 aa19.89■□□□□ 0.77
ATL3-202ENST00000535789 GREB1LQ9C091 1923 aaPredicted RBP19.89■□□□□ 0.77
ATL3-202ENST00000535789 DHX36Q9H2U1 1008 aaKnown RBP19.89■□□□□ 0.77
ATL3-202ENST00000535789 PI4KBQ9UBF8 816 aa19.89■□□□□ 0.77
ATL3-202ENST00000535789 ZHX2Q9Y6X8 837 aa19.89■□□□□ 0.77
ATL3-202ENST00000535789 CAP2P40123 477 aa19.88■□□□□ 0.77
ATL3-202ENST00000535789 TMED8Q6PL24 325 aaPredicted RBP19.88■□□□□ 0.77
ATL3-202ENST00000535789 CD99L2Q8TCZ2 262 aa19.88■□□□□ 0.77
ATL3-202ENST00000535789 ECHDC1Q9NTX5 307 aa19.88■□□□□ 0.77
ATL3-202ENST00000535789 HERC5Q9UII4 1024 aaKnown RBP19.88■□□□□ 0.77
ATL3-202ENST00000535789 MAGEB6P1A0A0J9YX57 407 aa19.87■□□□□ 0.77
ATL3-202ENST00000535789 ANKRD23Q86SG2 305 aa19.87■□□□□ 0.77
ATL3-202ENST00000535789 ZCCHC17Q9NP64 241 aaKnown RBP19.87■□□□□ 0.77
ATL3-202ENST00000535789 PICK1Q9NRD5 415 aa19.87■□□□□ 0.77
ATL3-202ENST00000535789 CXCL11O14625 94 aa19.86■□□□□ 0.77
ATL3-202ENST00000535789 PI4K2BQ8TCG2 481 aa19.86■□□□□ 0.77
ATL3-202ENST00000535789 SDR42E1Q8WUS8 393 aa19.86■□□□□ 0.77
ATL3-202ENST00000535789 ARMT1Q9H993 441 aa19.86■□□□□ 0.77
ATL3-202ENST00000535789 PLXNB2O15031 1838 aa19.86■□□□□ 0.77
ATL3-202ENST00000535789 TRIM75PA6NK02 468 aa19.85■□□□□ 0.77
ATL3-202ENST00000535789 PDHXO00330 501 aa19.85■□□□□ 0.77
ATL3-202ENST00000535789 TLR2O60603 784 aa19.85■□□□□ 0.77
ATL3-202ENST00000535789 GDF11O95390 407 aa19.85■□□□□ 0.77
ATL3-202ENST00000535789 USP5P45974 858 aa19.85■□□□□ 0.77
ATL3-202ENST00000535789 OTOP1Q7RTM1 612 aa19.85■□□□□ 0.77
ATL3-202ENST00000535789 ARHGAP39Q9C0H5 1083 aa19.85■□□□□ 0.77
ATL3-202ENST00000535789 ZFYVE28Q9HCC9 887 aa19.85■□□□□ 0.77
ATL3-202ENST00000535789 RLFQ13129 1914 aa19.84■□□□□ 0.77
ATL3-202ENST00000535789 MKI67P46013 3256 aaKnown RBP19.84■□□□□ 0.77
ATL3-202ENST00000535789 CCDC85CA6NKD9 419 aa19.84■□□□□ 0.77
ATL3-202ENST00000535789 SMIM22K7EJ46 135 aa19.84■□□□□ 0.77
ATL3-202ENST00000535789 PRKAB2O43741 272 aa19.84■□□□□ 0.77
ATL3-202ENST00000535789 MBD4O95243 580 aa19.84■□□□□ 0.77
ATL3-202ENST00000535789 CTGFP29279 349 aa19.84■□□□□ 0.77
ATL3-202ENST00000535789 PLCD1P51178 756 aa19.84■□□□□ 0.77
ATL3-202ENST00000535789 SP3Q02447 781 aa19.84■□□□□ 0.77
ATL3-202ENST00000535789 HDAC1Q13547 482 aaPredicted RBP19.84■□□□□ 0.77
ATL3-202ENST00000535789 CERS3Q8IU89 383 aa19.84■□□□□ 0.77
ATL3-202ENST00000535789 EXOC6Q8TAG9 804 aa19.84■□□□□ 0.77
ATL3-202ENST00000535789 HPS5Q9UPZ3 1129 aa19.84■□□□□ 0.77
ATL3-202ENST00000535789 CYP2C8P10632 490 aa19.83■□□□□ 0.77
ATL3-202ENST00000535789 TREML2Q5T2D2 321 aa19.83■□□□□ 0.77
ATL3-202ENST00000535789 C17orf99Q6UX52 265 aa19.83■□□□□ 0.77
ATL3-202ENST00000535789 PUS7LQ9H0K6 701 aaKnown RBP19.83■□□□□ 0.77
ATL3-202ENST00000535789 EHD4Q9H223 541 aa19.83■□□□□ 0.77
ATL3-202ENST00000535789 DCP1AQ9NPI6 582 aaPredicted RBP19.83■□□□□ 0.77
ATL3-202ENST00000535789 TRIM17Q9Y577 477 aa19.83■□□□□ 0.77
ATL3-202ENST00000535789 CYP2D6P10635 497 aa19.82■□□□□ 0.76
ATL3-202ENST00000535789 SHMT1P34896 483 aa19.82■□□□□ 0.76
ATL3-202ENST00000535789 GABPAQ06546 454 aa19.82■□□□□ 0.76
ATL3-202ENST00000535789 UBE3CQ15386 1083 aa19.82■□□□□ 0.76
ATL3-202ENST00000535789 TATDN1Q6P1N9 297 aa19.82■□□□□ 0.76
ATL3-202ENST00000535789 FBXO46Q6PJ61 603 aaPredicted RBP19.82■□□□□ 0.76
ATL3-202ENST00000535789 FOXP4Q8IVH2 680 aaPredicted RBP19.82■□□□□ 0.76
ATL3-202ENST00000535789 CRACR2BQ8N4Y2 399 aaPredicted RBP19.82■□□□□ 0.76
ATL3-202ENST00000535789 ERO1AQ96HE7 468 aa19.82■□□□□ 0.76
ATL3-202ENST00000535789 CPA4Q9UI42 421 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms