RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 ERC1Q8IUD2 1116 aa13.24□□□□□ -0.29
CCDC60-202ENST00000535685 FAM43AQ8N2R8 423 aa13.24□□□□□ -0.29
CCDC60-202ENST00000535685 ZFYVE28Q9HCC9 887 aa13.24□□□□□ -0.29
CCDC60-202ENST00000535685 DDX19BQ9UMR2 479 aa13.24□□□□□ -0.29
CCDC60-202ENST00000535685 HTTP42858 3142 aa13.24□□□□□ -0.29
CCDC60-202ENST00000535685 DDTLA6NHG4 134 aaPredicted RBP13.23□□□□□ -0.29
CCDC60-202ENST00000535685 BTBD19C9JJ37 291 aa13.23□□□□□ -0.29
CCDC60-202ENST00000535685 CXCL11O14625 94 aa13.23□□□□□ -0.29
CCDC60-202ENST00000535685 MLLT1Q03111 559 aaPredicted RBP13.23□□□□□ -0.29
CCDC60-202ENST00000535685 TAF1CQ15572 869 aaPredicted RBP13.23□□□□□ -0.29
CCDC60-202ENST00000535685 HSP90AB4PQ58FF6 505 aa13.23□□□□□ -0.29
CCDC60-202ENST00000535685 TTC39AQ5SRH9 613 aa13.23□□□□□ -0.29
CCDC60-202ENST00000535685 OTOP1Q7RTM1 612 aa13.23□□□□□ -0.29
CCDC60-202ENST00000535685 ANKRD23Q86SG2 305 aa13.23□□□□□ -0.29
CCDC60-202ENST00000535685 RPAP2Q8IXW5 612 aaPredicted RBP13.23□□□□□ -0.29
CCDC60-202ENST00000535685 EAF2Q96CJ1 260 aaPredicted RBP13.23□□□□□ -0.29
CCDC60-202ENST00000535685 CHMP4BQ9H444 224 aaKnown RBP13.23□□□□□ -0.29
CCDC60-202ENST00000535685 ZBTB40Q9NUA8 1239 aa13.23□□□□□ -0.29
CCDC60-202ENST00000535685 RAI14Q9P0K7 980 aa13.23□□□□□ -0.29
CCDC60-202ENST00000535685 LRP2BPQ9P2M1 347 aa13.23□□□□□ -0.29
CCDC60-202ENST00000535685 DBNLQ9UJU6 430 aaKnown RBP13.23□□□□□ -0.29
CCDC60-202ENST00000535685 TLR2O60603 784 aa13.22□□□□□ -0.29
CCDC60-202ENST00000535685 CTNND1O60716 968 aaKnown RBP13.22□□□□□ -0.29
CCDC60-202ENST00000535685 CYP2E1P05181 493 aaPredicted RBP13.22□□□□□ -0.29
CCDC60-202ENST00000535685 PLCG2P16885 1265 aa13.22□□□□□ -0.29
CCDC60-202ENST00000535685 MOGSQ13724 837 aa13.22□□□□□ -0.29
CCDC60-202ENST00000535685 ARHGEF6Q15052 776 aa13.22□□□□□ -0.29
CCDC60-202ENST00000535685 SCYL3Q8IZE3 742 aa13.22□□□□□ -0.29
CCDC60-202ENST00000535685 TMEM106CQ9BVX2 250 aa13.22□□□□□ -0.29
CCDC60-202ENST00000535685 RCAN3Q9UKA8 241 aa13.22□□□□□ -0.29
CCDC60-202ENST00000535685 ATAD5Q96QE3 1844 aa13.22□□□□□ -0.29
CCDC60-202ENST00000535685 RBBP6Q7Z6E9 1792 aaKnown RBP13.22□□□□□ -0.29
CCDC60-202ENST00000535685 TNRC18O15417 2968 aaPredicted RBP13.21□□□□□ -0.29
CCDC60-202ENST00000535685 PDE3AQ14432 1141 aa13.21□□□□□ -0.29
CCDC60-202ENST00000535685 TRIM17Q9Y577 477 aa13.21□□□□□ -0.29
CCDC60-202ENST00000535685 MYH1P12882 1939 aa13.21□□□□□ -0.3
CCDC60-202ENST00000535685 SIPA1L1O43166 1804 aa13.2□□□□□ -0.3
CCDC60-202ENST00000535685 DOCK3Q8IZD9 2030 aa13.2□□□□□ -0.3
CCDC60-202ENST00000535685 BAG3O95817 575 aa13.2□□□□□ -0.3
CCDC60-202ENST00000535685 PTPRAP18433 802 aa13.2□□□□□ -0.3
CCDC60-202ENST00000535685 ZAP70P43403 619 aa13.2□□□□□ -0.3
CCDC60-202ENST00000535685 NAA16Q6N069 864 aaPredicted RBP13.2□□□□□ -0.3
CCDC60-202ENST00000535685 CERS3Q8IU89 383 aa13.2□□□□□ -0.3
CCDC60-202ENST00000535685 ZSCAN29Q8IWY8 852 aaPredicted RBP13.2□□□□□ -0.3
CCDC60-202ENST00000535685 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.2□□□□□ -0.3
CCDC60-202ENST00000535685 CD99L2Q8TCZ2 262 aa13.2□□□□□ -0.3
CCDC60-202ENST00000535685 MS4A3Q96HJ5 214 aa13.2□□□□□ -0.3
CCDC60-202ENST00000535685 OSBPL5Q9H0X9 879 aaPredicted RBP13.2□□□□□ -0.3
CCDC60-202ENST00000535685 DHX36Q9H2U1 1008 aaKnown RBP13.2□□□□□ -0.3
CCDC60-202ENST00000535685 EFCC1Q9HA90 598 aa13.2□□□□□ -0.3
CCDC60-202ENST00000535685 PTPN22Q9Y2R2 807 aa13.2□□□□□ -0.3
CCDC60-202ENST00000535685 ADGRA2Q96PE1 1338 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 MGAMO43451 1857 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 A0A0G2JLL6 359 aaPredicted RBP13.19□□□□□ -0.3
CCDC60-202ENST00000535685 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 HMMRO75330 724 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 GNRH1P01148 92 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 PICALMQ13492 652 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 C17orf99Q6UX52 265 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 PRRT2Q7Z6L0 340 aaPredicted RBP13.19□□□□□ -0.3
CCDC60-202ENST00000535685 METTL16Q86W50 562 aaKnown RBP13.19□□□□□ -0.3
CCDC60-202ENST00000535685 SIRT2Q8IXJ6 389 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 TEX11Q8IYF3 940 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 RHPN1Q8TCX5 695 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 NOL10Q9BSC4 688 aaKnown RBP13.19□□□□□ -0.3
CCDC60-202ENST00000535685 TBC1D2Q9BYX2 928 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 CCDC8Q9H0W5 538 aaPredicted RBP13.19□□□□□ -0.3
CCDC60-202ENST00000535685 PICK1Q9NRD5 415 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 SNRKQ9NRH2 765 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 TLR7Q9NYK1 1049 aaKnown RBP13.19□□□□□ -0.3
CCDC60-202ENST00000535685 HERC5Q9UII4 1024 aaKnown RBP13.19□□□□□ -0.3
CCDC60-202ENST00000535685 EXOC6BQ9Y2D4 811 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 SLC45A1Q9Y2W3 748 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 AFG3L2Q9Y4W6 797 aa13.19□□□□□ -0.3
CCDC60-202ENST00000535685 RAB11FIP3O75154 756 aa13.18□□□□□ -0.3
CCDC60-202ENST00000535685 CAP1Q01518 475 aa13.18□□□□□ -0.3
CCDC60-202ENST00000535685 GPAT2Q6NUI2 795 aa13.18□□□□□ -0.3
CCDC60-202ENST00000535685 FASTKD5Q7L8L6 764 aaKnown RBP13.18□□□□□ -0.3
CCDC60-202ENST00000535685 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC60-202ENST00000535685 ARMC5Q96C12 935 aa13.18□□□□□ -0.3
CCDC60-202ENST00000535685 KIF1BPQ96EK5 621 aa13.18□□□□□ -0.3
CCDC60-202ENST00000535685 PIH1D3Q9NQM4 214 aaKnown RBP13.18□□□□□ -0.3
CCDC60-202ENST00000535685 PI4KBQ9UBF8 816 aa13.18□□□□□ -0.3
CCDC60-202ENST00000535685 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
CCDC60-202ENST00000535685 ZHX2Q9Y6X8 837 aa13.18□□□□□ -0.3
CCDC60-202ENST00000535685 PDHXO00330 501 aa13.17□□□□□ -0.3
CCDC60-202ENST00000535685 PRMT2P55345 433 aa13.17□□□□□ -0.3
CCDC60-202ENST00000535685 LACTBP83111 547 aaPredicted RBP13.17□□□□□ -0.3
CCDC60-202ENST00000535685 ADGRA1Q86SQ6 560 aa13.17□□□□□ -0.3
CCDC60-202ENST00000535685 AACSQ86V21 672 aa13.17□□□□□ -0.3
CCDC60-202ENST00000535685 SH3RF3Q8TEJ3 882 aaPredicted RBP13.17□□□□□ -0.3
CCDC60-202ENST00000535685 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCDC60-202ENST00000535685 GINM1Q9NU53 330 aa13.17□□□□□ -0.3
CCDC60-202ENST00000535685 AATFQ9NY61 560 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCDC60-202ENST00000535685 LOC285556D6RIA3 1793 aa13.17□□□□□ -0.3
CCDC60-202ENST00000535685 CENPFP49454 3210 aa13.17□□□□□ -0.3
CCDC60-202ENST00000535685 MYH7P12883 1935 aa13.16□□□□□ -0.3
CCDC60-202ENST00000535685 CAP2P40123 477 aa13.16□□□□□ -0.3
CCDC60-202ENST00000535685 SOX10P56693 466 aa13.16□□□□□ -0.3
CCDC60-202ENST00000535685 KIF22Q14807 665 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms