RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 SMC4Q9NTJ3 1288 aa14.5□□□□□ -0.09
LINC01089-204ENST00000535643 KCNH4Q9UQ05 1017 aa14.5□□□□□ -0.09
LINC01089-204ENST00000535643 ZNF292O60281 2723 aa14.5□□□□□ -0.09
LINC01089-204ENST00000535643 DOCK3Q8IZD9 2030 aa14.49□□□□□ -0.09
LINC01089-204ENST00000535643 HOXB3P14651 431 aaPredicted RBP14.49□□□□□ -0.09
LINC01089-204ENST00000535643 NUCB1Q02818 461 aa14.49□□□□□ -0.09
LINC01089-204ENST00000535643 PPIL2Q13356 520 aa14.49□□□□□ -0.09
LINC01089-204ENST00000535643 DLGAP5Q15398 846 aa14.49□□□□□ -0.09
LINC01089-204ENST00000535643 FOXD4L1Q9NU39 408 aa14.49□□□□□ -0.09
LINC01089-204ENST00000535643 ANKIB1Q9P2G1 1089 aa14.49□□□□□ -0.09
LINC01089-204ENST00000535643 ATP11BQ9Y2G3 1177 aa14.49□□□□□ -0.09
LINC01089-204ENST00000535643 USP24Q9UPU5 2620 aa14.49□□□□□ -0.09
LINC01089-204ENST00000535643 PRRC2BQ5JSZ5 2229 aaKnown RBP14.49□□□□□ -0.09
LINC01089-204ENST00000535643 ATRNL1Q5VV63 1379 aa14.48□□□□□ -0.09
LINC01089-204ENST00000535643 GRXCR1A8MXD5 290 aa14.48□□□□□ -0.09
LINC01089-204ENST00000535643 TRIM27P14373 513 aa14.48□□□□□ -0.09
LINC01089-204ENST00000535643 IL13P35225 146 aa14.48□□□□□ -0.09
LINC01089-204ENST00000535643 STRIP1Q5VSL9 837 aa14.48□□□□□ -0.09
LINC01089-204ENST00000535643 ARHGAP45Q92619 1136 aa14.48□□□□□ -0.09
LINC01089-204ENST00000535643 COA7Q96BR5 231 aa14.48□□□□□ -0.09
LINC01089-204ENST00000535643 PLEKHF1Q96S99 279 aa14.48□□□□□ -0.09
LINC01089-204ENST00000535643 GRPEL1Q9HAV7 217 aa14.48□□□□□ -0.09
LINC01089-204ENST00000535643 ZBTB40Q9NUA8 1239 aa14.48□□□□□ -0.09
LINC01089-204ENST00000535643 AOX1Q06278 1338 aa14.47□□□□□ -0.09
LINC01089-204ENST00000535643 RRP9O43818 475 aaKnown RBP14.47□□□□□ -0.09
LINC01089-204ENST00000535643 TMPOP42166 694 aaKnown RBP14.47□□□□□ -0.09
LINC01089-204ENST00000535643 MFAP1P55081 439 aaKnown RBP14.47□□□□□ -0.09
LINC01089-204ENST00000535643 RAB3GAP1Q15042 981 aa14.47□□□□□ -0.09
LINC01089-204ENST00000535643 ST3GAL2Q16842 350 aa14.47□□□□□ -0.09
LINC01089-204ENST00000535643 MAP3K21Q5TCX8 1036 aa14.47□□□□□ -0.09
LINC01089-204ENST00000535643 LHX8Q68G74 356 aa14.47□□□□□ -0.09
LINC01089-204ENST00000535643 CCDC129Q6ZRS4 1044 aa14.47□□□□□ -0.09
LINC01089-204ENST00000535643 RRP7AQ9Y3A4 280 aaKnown RBP14.47□□□□□ -0.09
LINC01089-204ENST00000535643 TRIM43BA6NCK2 446 aa14.46□□□□□ -0.09
LINC01089-204ENST00000535643 DCXO43602 365 aa14.46□□□□□ -0.09
LINC01089-204ENST00000535643 HMOX1P09601 288 aa14.46□□□□□ -0.09
LINC01089-204ENST00000535643 PRKAR2AP13861 404 aaKnown RBP14.46□□□□□ -0.09
LINC01089-204ENST00000535643 CALD1Q05682 793 aaKnown RBP14.46□□□□□ -0.09
LINC01089-204ENST00000535643 ASCL5Q7RTU5 278 aa14.46□□□□□ -0.09
LINC01089-204ENST00000535643 SH3RF1Q7Z6J0 888 aa14.46□□□□□ -0.09
LINC01089-204ENST00000535643 ZKSCAN4Q969J2 545 aaPredicted RBP14.46□□□□□ -0.09
LINC01089-204ENST00000535643 TRIM43Q96BQ3 446 aaPredicted RBP14.46□□□□□ -0.09
LINC01089-204ENST00000535643 PDLIM7Q9NR12 457 aa14.46□□□□□ -0.09
LINC01089-204ENST00000535643 SOWAHBA6NEL2 793 aa14.45□□□□□ -0.1
LINC01089-204ENST00000535643 MOGSQ13724 837 aa14.45□□□□□ -0.1
LINC01089-204ENST00000535643 NEUROD2Q15784 382 aa14.45□□□□□ -0.1
LINC01089-204ENST00000535643 PLXNA1Q9UIW2 1896 aa14.45□□□□□ -0.1
LINC01089-204ENST00000535643 TNNQ9UQP3 1299 aa14.45□□□□□ -0.1
LINC01089-204ENST00000535643 TRIOO75962 3097 aa14.45□□□□□ -0.1
LINC01089-204ENST00000535643 POTEB3A0JP26 581 aa14.44□□□□□ -0.1
LINC01089-204ENST00000535643 GOLGA6L22H0YM25 854 aa14.44□□□□□ -0.1
LINC01089-204ENST00000535643 MYO1BO43795 1136 aa14.44□□□□□ -0.1
LINC01089-204ENST00000535643 TPM2P07951 284 aa14.44□□□□□ -0.1
LINC01089-204ENST00000535643 SSTR3P32745 418 aaPredicted RBP14.44□□□□□ -0.1
LINC01089-204ENST00000535643 EXOSC9Q06265 439 aaKnown RBP14.44□□□□□ -0.1
LINC01089-204ENST00000535643 POTEBQ6S5H4 581 aa14.44□□□□□ -0.1
LINC01089-204ENST00000535643 ITPRIPQ8IWB1 547 aa14.44□□□□□ -0.1
LINC01089-204ENST00000535643 FAM178BQ8IXR5 827 aa14.44□□□□□ -0.1
LINC01089-204ENST00000535643 SSH1Q8WYL5 1049 aa14.44□□□□□ -0.1
LINC01089-204ENST00000535643 TRIB2Q92519 343 aa14.44□□□□□ -0.1
LINC01089-204ENST00000535643 HLA-CQ95604 372 aa14.44□□□□□ -0.1
LINC01089-204ENST00000535643 TEPSINQ96N21 525 aa14.44□□□□□ -0.1
LINC01089-204ENST00000535643 ESPNB1AK53 854 aa14.43□□□□□ -0.1
LINC01089-204ENST00000535643 RPS8P62241 208 aaKnown RBP14.43□□□□□ -0.1
LINC01089-204ENST00000535643 CHD1LQ86WJ1 897 aa14.43□□□□□ -0.1
LINC01089-204ENST00000535643 TRIM35Q9UPQ4 493 aa14.43□□□□□ -0.1
LINC01089-204ENST00000535643 SH3TC1Q8TE82 1336 aa14.42□□□□□ -0.1
LINC01089-204ENST00000535643 BRWD1Q9NSI6 2320 aa14.42□□□□□ -0.1
LINC01089-204ENST00000535643 GNAT3A8MTJ3 354 aa14.42□□□□□ -0.1
LINC01089-204ENST00000535643 TERF1P54274 439 aa14.42□□□□□ -0.1
LINC01089-204ENST00000535643 CCDC173Q0VFZ6 552 aa14.42□□□□□ -0.1
LINC01089-204ENST00000535643 DGLUCYQ7Z3D6 616 aa14.42□□□□□ -0.1
LINC01089-204ENST00000535643 PRMT6Q96LA8 375 aaPredicted RBP14.42□□□□□ -0.1
LINC01089-204ENST00000535643 PRRX2Q99811 253 aa14.42□□□□□ -0.1
LINC01089-204ENST00000535643 TRPC6Q9Y210 931 aa14.42□□□□□ -0.1
LINC01089-204ENST00000535643 DMXL1Q9Y485 3027 aa14.42□□□□□ -0.1
LINC01089-204ENST00000535643 COL4A6Q14031 1691 aa14.42□□□□□ -0.1
LINC01089-204ENST00000535643 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
LINC01089-204ENST00000535643 HSP90AA1P07900 732 aaKnown RBP14.41□□□□□ -0.1
LINC01089-204ENST00000535643 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
LINC01089-204ENST00000535643 HS1BP3Q53T59 392 aa14.41□□□□□ -0.1
LINC01089-204ENST00000535643 GPAT2Q6NUI2 795 aa14.41□□□□□ -0.1
LINC01089-204ENST00000535643 TRMT112Q9UI30 125 aaKnown RBP14.41□□□□□ -0.1
LINC01089-204ENST00000535643 K7ELQ4 463 aaPredicted RBP14.4□□□□□ -0.1
LINC01089-204ENST00000535643 MYL6BP14649 208 aa14.4□□□□□ -0.1
LINC01089-204ENST00000535643 PPATQ06203 517 aa14.4□□□□□ -0.1
LINC01089-204ENST00000535643 SF3B3Q15393 1217 aaKnown RBP14.4□□□□□ -0.1
LINC01089-204ENST00000535643 NLRP10Q86W26 655 aa14.4□□□□□ -0.1
LINC01089-204ENST00000535643 TMEM57Q8N5G2 664 aa14.4□□□□□ -0.1
LINC01089-204ENST00000535643 TNPO1Q92973 898 aaKnown RBP14.4□□□□□ -0.1
LINC01089-204ENST00000535643 TRIM44Q96DX7 344 aaPredicted RBP14.4□□□□□ -0.1
LINC01089-204ENST00000535643 PPP1R9BQ96SB3 815 aa14.4□□□□□ -0.1
LINC01089-204ENST00000535643 NKX2-4Q9H2Z4 354 aa14.4□□□□□ -0.1
LINC01089-204ENST00000535643 GJD2Q9UKL4 321 aa14.4□□□□□ -0.1
LINC01089-204ENST00000535643 ECM29Q5VYK3 1845 aa14.4□□□□□ -0.1
LINC01089-204ENST00000535643 A0A0G2JMZ2 1700 aa14.39□□□□□ -0.11
LINC01089-204ENST00000535643 CCND3P30281 292 aaPredicted RBP14.39□□□□□ -0.11
LINC01089-204ENST00000535643 TRIM60Q495X7 471 aa14.39□□□□□ -0.11
LINC01089-204ENST00000535643 TTLL5Q6EMB2 1281 aa14.39□□□□□ -0.11
LINC01089-204ENST00000535643 ATOH1Q92858 354 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms