RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 DDX11Q96FC9 970 aa24.6■■□□□ 1.53
PDXDC1-205ENST00000535621 SYT17Q9BSW7 474 aa24.6■■□□□ 1.53
PDXDC1-205ENST00000535621 MCM9Q9NXL9 1143 aa24.6■■□□□ 1.53
PDXDC1-205ENST00000535621 NAV1Q8NEY1 1877 aa24.6■■□□□ 1.53
PDXDC1-205ENST00000535621 HMGN5P82970 282 aaKnown RBP24.59■■□□□ 1.53
PDXDC1-205ENST00000535621 APOA5Q6Q788 366 aa24.59■■□□□ 1.53
PDXDC1-205ENST00000535621 VPS37CA5D8V6 355 aaPredicted RBP24.59■■□□□ 1.53
PDXDC1-205ENST00000535621 PSMD14O00487 310 aa24.59■■□□□ 1.53
PDXDC1-205ENST00000535621 USP17L8P0C7I0 530 aa24.59■■□□□ 1.53
PDXDC1-205ENST00000535621 CYP2D6P10635 497 aa24.59■■□□□ 1.53
PDXDC1-205ENST00000535621 SART3Q15020 963 aaKnown RBP24.59■■□□□ 1.53
PDXDC1-205ENST00000535621 TGFBRAP1Q8WUH2 860 aa24.59■■□□□ 1.53
PDXDC1-205ENST00000535621 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.59■■□□□ 1.53
PDXDC1-205ENST00000535621 DHX16O60231 1041 aaKnown RBP24.58■■□□□ 1.53
PDXDC1-205ENST00000535621 PLCG2P16885 1265 aa24.58■■□□□ 1.53
PDXDC1-205ENST00000535621 RHBDL3P58872 404 aa24.58■■□□□ 1.53
PDXDC1-205ENST00000535621 NIM1KQ8IY84 436 aa24.58■■□□□ 1.53
PDXDC1-205ENST00000535621 ZKSCAN3Q9BRR0 538 aa24.58■■□□□ 1.53
PDXDC1-205ENST00000535621 RAB11FIP4Q86YS3 637 aa24.57■■□□□ 1.52
PDXDC1-205ENST00000535621 ZBTB12Q9Y330 459 aaPredicted RBP24.57■■□□□ 1.52
PDXDC1-205ENST00000535621 FOCADQ5VW36 1801 aa24.57■■□□□ 1.52
PDXDC1-205ENST00000535621 ORC4O43929 436 aa24.57■■□□□ 1.52
PDXDC1-205ENST00000535621 C12orf60Q5U649 245 aa24.57■■□□□ 1.52
PDXDC1-205ENST00000535621 CDC37L1Q7L3B6 337 aa24.57■■□□□ 1.52
PDXDC1-205ENST00000535621 LMBRD1Q9NUN5 540 aa24.57■■□□□ 1.52
PDXDC1-205ENST00000535621 ZNRF3Q9ULT6 936 aa24.57■■□□□ 1.52
PDXDC1-205ENST00000535621 ECM29Q5VYK3 1845 aa24.57■■□□□ 1.52
PDXDC1-205ENST00000535621 PRDM1O75626 825 aa24.56■■□□□ 1.52
PDXDC1-205ENST00000535621 SLC3A2P08195 630 aaKnown RBP24.56■■□□□ 1.52
PDXDC1-205ENST00000535621 NFXL1Q6ZNB6 911 aa24.56■■□□□ 1.52
PDXDC1-205ENST00000535621 FAM184AQ8NB25 1140 aa24.56■■□□□ 1.52
PDXDC1-205ENST00000535621 ERICH2A1L162 156 aa24.56■■□□□ 1.52
PDXDC1-205ENST00000535621 FOXD4L6Q3SYB3 417 aaPredicted RBP24.56■■□□□ 1.52
PDXDC1-205ENST00000535621 FOXD4L3Q6VB84 417 aaPredicted RBP24.56■■□□□ 1.52
PDXDC1-205ENST00000535621 TEX11Q8IYF3 940 aa24.56■■□□□ 1.52
PDXDC1-205ENST00000535621 UBAC1Q9BSL1 405 aa24.56■■□□□ 1.52
PDXDC1-205ENST00000535621 ATP6V1DQ9Y5K8 247 aa24.56■■□□□ 1.52
PDXDC1-205ENST00000535621 ZBTB43O43298 467 aa24.55■■□□□ 1.52
PDXDC1-205ENST00000535621 RANBP6O60518 1105 aaKnown RBP24.55■■□□□ 1.52
PDXDC1-205ENST00000535621 CRKP46108 304 aa24.55■■□□□ 1.52
PDXDC1-205ENST00000535621 METAP2P50579 478 aaKnown RBP eCLIP24.55■■□□□ 1.52
PDXDC1-205ENST00000535621 WTAPQ15007 396 aa24.55■■□□□ 1.52
PDXDC1-205ENST00000535621 MAPKAPK5Q8IW41 473 aa24.55■■□□□ 1.52
PDXDC1-205ENST00000535621 SLC12A7Q9Y666 1083 aa24.55■■□□□ 1.52
PDXDC1-205ENST00000535621 MYH1P12882 1939 aa24.55■■□□□ 1.52
PDXDC1-205ENST00000535621 TCHHQ07283 1943 aa24.55■■□□□ 1.52
PDXDC1-205ENST00000535621 CCDC69A6NI79 296 aa24.54■■□□□ 1.52
PDXDC1-205ENST00000535621 FDPSP14324 419 aaKnown RBP24.54■■□□□ 1.52
PDXDC1-205ENST00000535621 FKBP1AP62942 108 aaKnown RBP24.54■■□□□ 1.52
PDXDC1-205ENST00000535621 CXCL9Q07325 125 aa24.54■■□□□ 1.52
PDXDC1-205ENST00000535621 SEC23AQ15436 765 aa24.54■■□□□ 1.52
PDXDC1-205ENST00000535621 SKOR2Q2VWA4 1001 aaPredicted RBP24.54■■□□□ 1.52
PDXDC1-205ENST00000535621 MICU3Q86XE3 530 aa24.54■■□□□ 1.52
PDXDC1-205ENST00000535621 TMTC2Q8N394 836 aa24.54■■□□□ 1.52
PDXDC1-205ENST00000535621 KIF3AQ9Y496 699 aa24.54■■□□□ 1.52
PDXDC1-205ENST00000535621 ROBO3Q96MS0 1386 aa24.54■■□□□ 1.52
PDXDC1-205ENST00000535621 RXRAP19793 462 aa24.54■■□□□ 1.52
PDXDC1-205ENST00000535621 PDE4BQ07343 736 aa24.54■■□□□ 1.52
PDXDC1-205ENST00000535621 VPS33BQ9H267 617 aa24.54■■□□□ 1.52
PDXDC1-205ENST00000535621 DDX60LQ5H9U9 1706 aaKnown RBP24.53■■□□□ 1.52
PDXDC1-205ENST00000535621 SBF1O95248 1867 aa24.53■■□□□ 1.52
PDXDC1-205ENST00000535621 TNKSO95271 1327 aa24.53■■□□□ 1.52
PDXDC1-205ENST00000535621 PPFIA3O75145 1194 aa24.53■■□□□ 1.52
PDXDC1-205ENST00000535621 APOBEC3HQ6NTF7 200 aaKnown RBP24.53■■□□□ 1.52
PDXDC1-205ENST00000535621 RSBN1LQ6PCB5 846 aaPredicted RBP24.53■■□□□ 1.52
PDXDC1-205ENST00000535621 TEKT1Q969V4 418 aa24.53■■□□□ 1.52
PDXDC1-205ENST00000535621 ZSCAN10Q96SZ4 725 aaPredicted RBP24.53■■□□□ 1.52
PDXDC1-205ENST00000535621 FLT1P17948 1338 aa24.53■■□□□ 1.52
PDXDC1-205ENST00000535621 CPLX1O14810 134 aa24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 PRPF40AO75400 957 aaKnown RBP24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 VIL1P09327 827 aaKnown RBP24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 ARHGAP27Q6ZUM4 889 aa24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 MYL10Q9BUA6 226 aa24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 SAP30BPQ9UHR5 308 aaKnown RBP24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 NID2Q14112 1375 aa24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 LTBP3Q9NS15 1303 aa24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 YBX3P16989 372 aaKnown RBP eCLIP24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 ADD1P35611 737 aaKnown RBP24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 HHIPL2Q6UWX4 724 aa24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 AMOTL1Q8IY63 956 aa24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 ENAHQ8N8S7 591 aaPredicted RBP24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 JDP2Q8WYK2 163 aa24.52■■□□□ 1.52
PDXDC1-205ENST00000535621 CDC27P30260 824 aa24.51■■□□□ 1.51
PDXDC1-205ENST00000535621 PLCD1P51178 756 aa24.51■■□□□ 1.51
PDXDC1-205ENST00000535621 RBM5P52756 815 aaKnown RBP eCLIP24.51■■□□□ 1.51
PDXDC1-205ENST00000535621 IQCA1Q86XH1 822 aa24.51■■□□□ 1.51
PDXDC1-205ENST00000535621 GMLQ99445 158 aa24.51■■□□□ 1.51
PDXDC1-205ENST00000535621 FAM217BQ9NTX9 383 aaPredicted RBP24.51■■□□□ 1.51
PDXDC1-205ENST00000535621 GOLGA8AA7E2F4 631 aa24.51■■□□□ 1.51
PDXDC1-205ENST00000535621 CDC42EP5Q6NZY7 148 aa24.51■■□□□ 1.51
PDXDC1-205ENST00000535621 SYNE3Q6ZMZ3 975 aa24.51■■□□□ 1.51
PDXDC1-205ENST00000535621 FERMT3Q86UX7 667 aa24.51■■□□□ 1.51
PDXDC1-205ENST00000535621 SHTN1A0MZ66 631 aa24.5■■□□□ 1.51
PDXDC1-205ENST00000535621 H3BQV1 296 aa24.5■■□□□ 1.51
PDXDC1-205ENST00000535621 RCAN1P53805 252 aa24.5■■□□□ 1.51
PDXDC1-205ENST00000535621 CACNB3P54284 484 aa24.5■■□□□ 1.51
PDXDC1-205ENST00000535621 IFFO2Q5TF58 517 aa24.5■■□□□ 1.51
PDXDC1-205ENST00000535621 CCDC144CPQ8IYA2 1237 aa24.5■■□□□ 1.51
PDXDC1-205ENST00000535621 DYNLL2Q96FJ2 89 aa24.5■■□□□ 1.51
PDXDC1-205ENST00000535621 POLR3DP05423 398 aaPredicted RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms