RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 ANKRD65E5RJM6 399 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 IFIT3O14879 490 aaKnown RBP15.31■□□□□ 0.04
HDAC4-214ENST00000535493 TUBB4AP04350 444 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 CDC25AP30304 524 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 ZNF569Q5MCW4 686 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 NOSTRINQ8IVI9 506 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 GOLGA1Q92805 767 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 CDC5LQ99459 802 aaKnown RBP15.31■□□□□ 0.04
HDAC4-214ENST00000535493 LY9Q9HBG7 655 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 RAI14Q9P0K7 980 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 SMIM22K7EJ46 135 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 ZNF18P17022 549 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 CHMP4BP1P59074 171 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 ACRBPQ8NEB7 543 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 EPSTI1Q96J88 318 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 SIPA1L3O60292 1781 aaPredicted RBP15.31■□□□□ 0.04
HDAC4-214ENST00000535493 CPDO75976 1380 aa15.31■□□□□ 0.04
HDAC4-214ENST00000535493 ZFYP08048 801 aaPredicted RBP15.3■□□□□ 0.04
HDAC4-214ENST00000535493 CD44P16070 742 aaKnown RBP15.3■□□□□ 0.04
HDAC4-214ENST00000535493 TXLNAP40222 546 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 FOXR1Q6PIV2 292 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 CPLX2Q6PUV4 134 aaKnown RBP15.3■□□□□ 0.04
HDAC4-214ENST00000535493 LDHAL6AQ6ZMR3 332 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 NUP133Q8WUM0 1156 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 CABP5Q9NP86 173 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 SLC12A7Q9Y666 1083 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 A0A087X0B3 334 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 CCT6AP40227 531 aaKnown RBP15.3■□□□□ 0.04
HDAC4-214ENST00000535493 CSRNP2Q9H175 543 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 ANKZF1Q9H8Y5 726 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 PRKAB2O43741 272 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 CDKL5O76039 1030 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 SSRP1Q08945 709 aaKnown RBP15.3■□□□□ 0.04
HDAC4-214ENST00000535493 IFIT5Q13325 482 aaKnown RBP15.3■□□□□ 0.04
HDAC4-214ENST00000535493 IGSF22Q8N9C0 903 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 HINFPQ9BQA5 517 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 PLEKHA4Q9H4M7 779 aa15.3■□□□□ 0.04
HDAC4-214ENST00000535493 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.3■□□□□ 0.04
HDAC4-214ENST00000535493 TPM1P09493 284 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 CASP14P31944 242 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 ADD2P35612 726 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 PHKA1P46020 1223 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 NR1I3Q14994 352 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 KIF4BQ2VIQ3 1234 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 RABGGTAQ92696 567 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 GREM2Q9H772 168 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 FBXO2Q9UK22 296 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-214ENST00000535493 AKR1B15C9JRZ8 316 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-214ENST00000535493 CIAO1O76071 339 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 CCDC175P0C221 793 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 FCHSD1Q86WN1 690 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 TXLNBQ8N3L3 684 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 ABCB6Q9NP58 842 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 TFR2Q9UP52 801 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 AKAP2Q9Y2D5 859 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 ADGRG1Q9Y653 693 aa15.29■□□□□ 0.04
HDAC4-214ENST00000535493 USP54Q70EL1 1684 aa15.28■□□□□ 0.04
HDAC4-214ENST00000535493 RNF225M0QZC1 329 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-214ENST00000535493 MORC3Q14149 939 aa15.28■□□□□ 0.04
HDAC4-214ENST00000535493 GDAP1L1Q96MZ0 367 aa15.28■□□□□ 0.04
HDAC4-214ENST00000535493 CNNM1Q9NRU3 951 aa15.28■□□□□ 0.04
HDAC4-214ENST00000535493 ARFGEF2Q9Y6D5 1785 aa15.28■□□□□ 0.04
HDAC4-214ENST00000535493 WNT7AO00755 349 aa15.28■□□□□ 0.04
HDAC4-214ENST00000535493 FXR1P51114 621 aaKnown RBP eCLIP15.28■□□□□ 0.04
HDAC4-214ENST00000535493 DHX8Q14562 1220 aaKnown RBP15.28■□□□□ 0.04
HDAC4-214ENST00000535493 NOM1Q5C9Z4 860 aaKnown RBP15.28■□□□□ 0.04
HDAC4-214ENST00000535493 EARS2Q5JPH6 523 aaKnown RBP15.28■□□□□ 0.04
HDAC4-214ENST00000535493 NUTM2AQ8IVF1 878 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-214ENST00000535493 AIDAQ96BJ3 306 aa15.28■□□□□ 0.04
HDAC4-214ENST00000535493 ARMT1Q9H993 441 aa15.28■□□□□ 0.04
HDAC4-214ENST00000535493 PRDM1O75626 825 aa15.27■□□□□ 0.04
HDAC4-214ENST00000535493 GPS2Q13227 327 aa15.27■□□□□ 0.04
HDAC4-214ENST00000535493 SLC35F6Q8N357 371 aa15.27■□□□□ 0.04
HDAC4-214ENST00000535493 ENOX1Q8TC92 643 aaKnown RBP15.27■□□□□ 0.04
HDAC4-214ENST00000535493 EPB41L4AQ9HCS5 686 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-214ENST00000535493 MAPK8IP1Q9UQF2 711 aa15.27■□□□□ 0.04
HDAC4-214ENST00000535493 FAM237AA0A1B0GTK4 181 aa15.27■□□□□ 0.03
HDAC4-214ENST00000535493 PDE6AP16499 860 aa15.27■□□□□ 0.03
HDAC4-214ENST00000535493 ITGA6P23229 1130 aa15.27■□□□□ 0.03
HDAC4-214ENST00000535493 PPFIBP1Q86W92 1011 aa15.27■□□□□ 0.03
HDAC4-214ENST00000535493 RGS22Q8NE09 1264 aa15.27■□□□□ 0.03
HDAC4-214ENST00000535493 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.27■□□□□ 0.035e-6■■■■■ 34.6
HDAC4-214ENST00000535493 FAN1Q9Y2M0 1017 aa15.27■□□□□ 0.03
HDAC4-214ENST00000535493 BAZ2BQ9UIF8 2168 aaKnown RBP15.26■□□□□ 0.03
HDAC4-214ENST00000535493 ACTN4O43707 911 aaKnown RBP15.26■□□□□ 0.03
HDAC4-214ENST00000535493 MMP1P03956 469 aa15.26■□□□□ 0.03
HDAC4-214ENST00000535493 PTPREP23469 700 aa15.26■□□□□ 0.03
HDAC4-214ENST00000535493 VSNL1P62760 191 aa15.26■□□□□ 0.03
HDAC4-214ENST00000535493 BEND6Q5SZJ8 279 aaPredicted RBP15.26■□□□□ 0.03
HDAC4-214ENST00000535493 SRGAP1Q7Z6B7 1085 aa15.26■□□□□ 0.03
HDAC4-214ENST00000535493 MLKLQ8NB16 471 aa15.26■□□□□ 0.03
HDAC4-214ENST00000535493 TRIM10Q9UDY6 481 aa15.26■□□□□ 0.03
HDAC4-214ENST00000535493 SARSP49591 514 aaKnown RBP15.26■□□□□ 0.03
HDAC4-214ENST00000535493 SAFBQ15424 915 aaKnown RBP eCLIP15.26■□□□□ 0.03
HDAC4-214ENST00000535493 JAKMIP3Q5VZ66 844 aa15.26■□□□□ 0.03
HDAC4-214ENST00000535493 NCAPH2Q6IBW4 605 aa15.26■□□□□ 0.03
HDAC4-214ENST00000535493 APTXQ7Z2E3 356 aaKnown RBP15.26■□□□□ 0.03
HDAC4-214ENST00000535493 PROSER2Q86WR7 435 aaPredicted RBP15.26■□□□□ 0.03
HDAC4-214ENST00000535493 CERS3Q8IU89 383 aa15.26■□□□□ 0.03
HDAC4-214ENST00000535493 NOA1Q8NC60 698 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms