RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 NOSTRINQ8IVI9 506 aa16■□□□□ 0.15
NEK4-207ENST00000535191 CMTR1Q8N1G2 835 aaKnown RBP16■□□□□ 0.15
NEK4-207ENST00000535191 TIGD1Q96MW7 591 aa16■□□□□ 0.15
NEK4-207ENST00000535191 MMP1P03956 469 aa15.99■□□□□ 0.15
NEK4-207ENST00000535191 LRMPQ12912 555 aa15.99■□□□□ 0.15
NEK4-207ENST00000535191 TPTE2Q6XPS3 522 aa15.99■□□□□ 0.15
NEK4-207ENST00000535191 ZNF384Q8TF68 577 aa15.99■□□□□ 0.15
NEK4-207ENST00000535191 BRIP1Q9BX63 1249 aa15.99■□□□□ 0.15
NEK4-207ENST00000535191 KCNJ14Q9UNX9 436 aa15.99■□□□□ 0.15
NEK4-207ENST00000535191 SEMA3EO15041 775 aa15.99■□□□□ 0.15
NEK4-207ENST00000535191 DEXIO95424 95 aa15.99■□□□□ 0.15
NEK4-207ENST00000535191 SEC23AQ15436 765 aa15.99■□□□□ 0.15
NEK4-207ENST00000535191 CCDC24Q8N4L8 307 aa15.99■□□□□ 0.15
NEK4-207ENST00000535191 CLIC6Q96NY7 704 aa15.99■□□□□ 0.15
NEK4-207ENST00000535191 HPSEQ9Y251 543 aa15.99■□□□□ 0.15
NEK4-207ENST00000535191 MROH7-TTC4A0A0A0MT08 1334 aa15.98■□□□□ 0.15
NEK4-207ENST00000535191 BIN1O00499 593 aa15.98■□□□□ 0.15
NEK4-207ENST00000535191 GNPATO15228 680 aa15.98■□□□□ 0.15
NEK4-207ENST00000535191 CUTAO60888 179 aa15.98■□□□□ 0.15
NEK4-207ENST00000535191 KLRK1P26718 216 aa15.98■□□□□ 0.15
NEK4-207ENST00000535191 HIBADHP31937 336 aaKnown RBP15.98■□□□□ 0.15
NEK4-207ENST00000535191 NLRP12P59046 1061 aa15.98■□□□□ 0.15
NEK4-207ENST00000535191 DPCR1Q3MIW9 517 aa15.98■□□□□ 0.15
NEK4-207ENST00000535191 CCDC144BQ3MJ40 725 aa15.98■□□□□ 0.15
NEK4-207ENST00000535191 DIS3L2Q8IYB7 885 aaKnown RBP15.98■□□□□ 0.15
NEK4-207ENST00000535191 ANKRD2Q9GZV1 360 aa15.98■□□□□ 0.15
NEK4-207ENST00000535191 COL1A1P02452 1464 aaPredicted RBP15.98■□□□□ 0.15
NEK4-207ENST00000535191 TNKSO95271 1327 aa15.98■□□□□ 0.15
NEK4-207ENST00000535191 CYP2D7A0A087X1C5 515 aa15.97■□□□□ 0.15
NEK4-207ENST00000535191 RESP18Q5W5W9 173 aa15.97■□□□□ 0.15
NEK4-207ENST00000535191 PRIMPOLQ96LW4 560 aa15.97■□□□□ 0.15
NEK4-207ENST00000535191 BPIFA3Q9BQP9 254 aa15.97■□□□□ 0.15
NEK4-207ENST00000535191 TFCP2L1Q9NZI6 479 aa15.97■□□□□ 0.15
NEK4-207ENST00000535191 FAM237AA0A1B0GTK4 181 aa15.97■□□□□ 0.15
NEK4-207ENST00000535191 PPP2R5BQ15173 497 aa15.97■□□□□ 0.15
NEK4-207ENST00000535191 CACTINQ8WUQ7 758 aaKnown RBP15.97■□□□□ 0.15
NEK4-207ENST00000535191 NSUN4Q96CB9 384 aaKnown RBP15.97■□□□□ 0.15
NEK4-207ENST00000535191 ZSCAN10Q96SZ4 725 aaPredicted RBP15.97■□□□□ 0.15
NEK4-207ENST00000535191 FOXP1Q9H334 677 aaPredicted RBP15.97■□□□□ 0.15
NEK4-207ENST00000535191 TOB1P50616 345 aaPredicted RBP15.96■□□□□ 0.15
NEK4-207ENST00000535191 MECOMQ03112 1051 aa15.96■□□□□ 0.15
NEK4-207ENST00000535191 CTR9Q6PD62 1173 aa15.96■□□□□ 0.15
NEK4-207ENST00000535191 RTCBQ9Y3I0 505 aaKnown RBP15.96■□□□□ 0.15
NEK4-207ENST00000535191 TIAM2Q8IVF5 1701 aa15.96■□□□□ 0.15
NEK4-207ENST00000535191 USP17L12C9JPN9 530 aa15.96■□□□□ 0.15
NEK4-207ENST00000535191 USP17L21D6R901 530 aa15.96■□□□□ 0.15
NEK4-207ENST00000535191 ENAHQ8N8S7 591 aaPredicted RBP15.96■□□□□ 0.15
NEK4-207ENST00000535191 CCNL1Q9UK58 526 aaPredicted RBP15.96■□□□□ 0.15
NEK4-207ENST00000535191 DYNC1I1O14576 645 aa15.95■□□□□ 0.14
NEK4-207ENST00000535191 FGRP09769 529 aa15.95■□□□□ 0.14
NEK4-207ENST00000535191 KRI1Q8N9T8 703 aaKnown RBP15.95■□□□□ 0.14
NEK4-207ENST00000535191 MYRIPQ8NFW9 859 aa15.95■□□□□ 0.14
NEK4-207ENST00000535191 ARHGEF1Q92888 912 aaKnown RBP15.95■□□□□ 0.14
NEK4-207ENST00000535191 UBAP1LF5GYI3 381 aa15.95■□□□□ 0.14
NEK4-207ENST00000535191 PRDM1O75626 825 aa15.95■□□□□ 0.14
NEK4-207ENST00000535191 TM4SF1P30408 202 aa15.95■□□□□ 0.14
NEK4-207ENST00000535191 AKAP17AQ02040 695 aaKnown RBP15.95■□□□□ 0.14
NEK4-207ENST00000535191 HSP90AA2PQ14568 343 aaPredicted RBP15.95■□□□□ 0.14
NEK4-207ENST00000535191 RILPL1Q5EBL4 403 aa15.95■□□□□ 0.14
NEK4-207ENST00000535191 IFIT1BQ5T764 474 aaKnown RBP15.95■□□□□ 0.14
NEK4-207ENST00000535191 ISM2Q6H9L7 571 aa15.95■□□□□ 0.14
NEK4-207ENST00000535191 FNBP4Q8N3X1 1017 aaPredicted RBP15.95■□□□□ 0.14
NEK4-207ENST00000535191 RRP9O43818 475 aaKnown RBP15.94■□□□□ 0.14
NEK4-207ENST00000535191 PCP11498 1178 aaKnown RBP15.94■□□□□ 0.14
NEK4-207ENST00000535191 CHAF1AQ13111 956 aaPredicted RBP15.94■□□□□ 0.14
NEK4-207ENST00000535191 NR5A1Q13285 461 aa15.94■□□□□ 0.14
NEK4-207ENST00000535191 FAM182BQ5T319 152 aa15.94■□□□□ 0.14
NEK4-207ENST00000535191 CATIPQ7Z7H3 387 aa15.94■□□□□ 0.14
NEK4-207ENST00000535191 IQCA1Q86XH1 822 aa15.94■□□□□ 0.14
NEK4-207ENST00000535191 LRRC8AQ8IWT6 810 aa15.94■□□□□ 0.14
NEK4-207ENST00000535191 RNF26Q9BY78 433 aaPredicted RBP15.94■□□□□ 0.14
NEK4-207ENST00000535191 TUBE1Q9UJT0 475 aa15.94■□□□□ 0.14
NEK4-207ENST00000535191 KCNH3Q9ULD8 1083 aa15.94■□□□□ 0.14
NEK4-207ENST00000535191 SMTNL1A8MU46 457 aa15.94■□□□□ 0.14
NEK4-207ENST00000535191 LONRF3Q496Y0 759 aa15.94■□□□□ 0.14
NEK4-207ENST00000535191 AATFQ9NY61 560 aaKnown RBP eCLIP15.94■□□□□ 0.14
NEK4-207ENST00000535191 PDS5AQ29RF7 1337 aaKnown RBP15.94■□□□□ 0.14
NEK4-207ENST00000535191 RBM10P98175 930 aaKnown RBP15.93■□□□□ 0.14
NEK4-207ENST00000535191 OXER1Q8TDS5 423 aa15.93■□□□□ 0.14
NEK4-207ENST00000535191 CRNKL1Q9BZJ0 848 aaKnown RBP15.93■□□□□ 0.14
NEK4-207ENST00000535191 NPHP1O15259 732 aa15.93■□□□□ 0.14
NEK4-207ENST00000535191 NEMFO60524 1076 aa15.93■□□□□ 0.14
NEK4-207ENST00000535191 TPM4P67936 248 aa15.93■□□□□ 0.14
NEK4-207ENST00000535191 ARID5BQ14865 1188 aa15.93■□□□□ 0.14
NEK4-207ENST00000535191 KRBA2Q6ZNG9 492 aa15.93■□□□□ 0.14
NEK4-207ENST00000535191 FILIP1Q7Z7B0 1213 aa15.93■□□□□ 0.14
NEK4-207ENST00000535191 AMIGO3Q86WK7 504 aa15.93■□□□□ 0.14
NEK4-207ENST00000535191 XBP1P17861 261 aa15.92■□□□□ 0.14
NEK4-207ENST00000535191 PTPREP23469 700 aa15.92■□□□□ 0.14
NEK4-207ENST00000535191 PRDX5P30044 214 aa15.92■□□□□ 0.14
NEK4-207ENST00000535191 PNOCQ13519 176 aa15.92■□□□□ 0.14
NEK4-207ENST00000535191 SPECC1Q5M775 1068 aa15.92■□□□□ 0.14
NEK4-207ENST00000535191 TXNRD3Q86VQ6 643 aa15.92■□□□□ 0.14
NEK4-207ENST00000535191 CNNM3Q8NE01 707 aa15.92■□□□□ 0.14
NEK4-207ENST00000535191 CABP5Q9NP86 173 aa15.92■□□□□ 0.14
NEK4-207ENST00000535191 DCP1AQ9NPI6 582 aaPredicted RBP15.92■□□□□ 0.14
NEK4-207ENST00000535191 USP21Q9UK80 565 aa15.92■□□□□ 0.14
NEK4-207ENST00000535191 PCDHB6Q9Y5E3 794 aa15.92■□□□□ 0.14
NEK4-207ENST00000535191 V9GY48 417 aaPredicted RBP15.92■□□□□ 0.14
NEK4-207ENST00000535191 PRPF3O43395 683 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms