RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 PPM1JQ5JR12 505 aa5.96□□□□□ -1.46
HIPK3-206ENST00000534262 C9orf131Q5VYM1 1079 aa5.96□□□□□ -1.46
HIPK3-206ENST00000534262 PAOXQ6QHF9 649 aa5.96□□□□□ -1.46
HIPK3-206ENST00000534262 HDXQ7Z353 690 aa5.96□□□□□ -1.46
HIPK3-206ENST00000534262 SMYD4Q8IYR2 804 aaPredicted RBP5.96□□□□□ -1.46
HIPK3-206ENST00000534262 JARID2Q92833 1246 aaPredicted RBP5.96□□□□□ -1.46
HIPK3-206ENST00000534262 GATA6Q92908 595 aa5.96□□□□□ -1.46
HIPK3-206ENST00000534262 PLPPR2Q96GM1 343 aa5.96□□□□□ -1.46
HIPK3-206ENST00000534262 TGIF2Q9GZN2 237 aa5.96□□□□□ -1.46
HIPK3-206ENST00000534262 C1GALT1Q9NS00 363 aa5.96□□□□□ -1.46
HIPK3-206ENST00000534262 PRKAG2Q9UGJ0 569 aa5.96□□□□□ -1.46
HIPK3-206ENST00000534262 CILPO75339 1184 aa5.95□□□□□ -1.46
HIPK3-206ENST00000534262 RAB6AP20340 208 aa5.95□□□□□ -1.46
HIPK3-206ENST00000534262 ZNF76P36508 570 aa5.95□□□□□ -1.46
HIPK3-206ENST00000534262 ZBTB37Q5TC79 503 aa5.95□□□□□ -1.46
HIPK3-206ENST00000534262 FBXL19Q6PCT2 694 aa5.95□□□□□ -1.46
HIPK3-206ENST00000534262 BNC2Q6ZN30 1099 aaPredicted RBP5.95□□□□□ -1.46
HIPK3-206ENST00000534262 NOP9Q86U38 636 aaKnown RBP5.95□□□□□ -1.46
HIPK3-206ENST00000534262 SHISA5Q8N114 240 aa5.95□□□□□ -1.46
HIPK3-206ENST00000534262 GATAD2BQ8WXI9 593 aa5.95□□□□□ -1.46
HIPK3-206ENST00000534262 ISL2Q96A47 359 aa5.95□□□□□ -1.46
HIPK3-206ENST00000534262 PSMG3-AS1Q96PY0 264 aa5.95□□□□□ -1.46
HIPK3-206ENST00000534262 PIDD1Q9HB75 910 aa5.95□□□□□ -1.46
HIPK3-206ENST00000534262 PCOLCE2Q9UKZ9 415 aa5.95□□□□□ -1.46
HIPK3-206ENST00000534262 GREM1O60565 184 aa5.94□□□□□ -1.46
HIPK3-206ENST00000534262 RNGTTO60942 597 aaKnown RBP5.94□□□□□ -1.46
HIPK3-206ENST00000534262 ADMP35318 185 aa5.94□□□□□ -1.46
HIPK3-206ENST00000534262 EIF4A3P38919 411 aaKnown RBP5.94□□□□□ -1.46
HIPK3-206ENST00000534262 RPL6Q02878 288 aaKnown RBP5.94□□□□□ -1.46
HIPK3-206ENST00000534262 ZDHHC13Q8IUH4 622 aa5.94□□□□□ -1.46
HIPK3-206ENST00000534262 RNF34Q969K3 372 aa5.94□□□□□ -1.46
HIPK3-206ENST00000534262 ELMO3Q96BJ8 720 aa5.94□□□□□ -1.46
HIPK3-206ENST00000534262 DBNDD2Q9BQY9 259 aa5.94□□□□□ -1.46
HIPK3-206ENST00000534262 WNT10AQ9GZT5 417 aa5.94□□□□□ -1.46
HIPK3-206ENST00000534262 DAGLAQ9Y4D2 1042 aa5.94□□□□□ -1.46
HIPK3-206ENST00000534262 TACC3Q9Y6A5 838 aa5.94□□□□□ -1.46
HIPK3-206ENST00000534262 F13A1P00488 732 aa5.93□□□□□ -1.46
HIPK3-206ENST00000534262 F13BP05160 661 aa5.93□□□□□ -1.46
HIPK3-206ENST00000534262 FAM160A1Q05DH4 1040 aa5.93□□□□□ -1.46
HIPK3-206ENST00000534262 RBL2Q08999 1139 aa5.93□□□□□ -1.46
HIPK3-206ENST00000534262 WIPI1Q5MNZ9 446 aaPredicted RBP5.93□□□□□ -1.46
HIPK3-206ENST00000534262 ZAR1Q86SH2 424 aa5.93□□□□□ -1.46
HIPK3-206ENST00000534262 GOLM1Q8NBJ4 401 aa5.93□□□□□ -1.46
HIPK3-206ENST00000534262 ZNF296Q8WUU4 475 aaPredicted RBP5.93□□□□□ -1.46
HIPK3-206ENST00000534262 MFSD14AQ96MC6 490 aa5.93□□□□□ -1.46
HIPK3-206ENST00000534262 LNPKQ9C0E8 428 aa5.93□□□□□ -1.46
HIPK3-206ENST00000534262 LGR6Q9HBX8 967 aa5.93□□□□□ -1.46
HIPK3-206ENST00000534262 ADAMTS1Q9UHI8 967 aa5.93□□□□□ -1.46
HIPK3-206ENST00000534262 PRR19A6NJB7 356 aa5.92□□□□□ -1.46
HIPK3-206ENST00000534262 FAM196AQ6ZSG2 479 aa5.92□□□□□ -1.46
HIPK3-206ENST00000534262 UBE3DQ7Z6J8 389 aa5.92□□□□□ -1.46
HIPK3-206ENST00000534262 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.92□□□□□ -1.46
HIPK3-206ENST00000534262 SHKBP1Q8TBC3 707 aa5.92□□□□□ -1.46
HIPK3-206ENST00000534262 ZNF507Q8TCN5 953 aa5.92□□□□□ -1.46
HIPK3-206ENST00000534262 TBC1D32Q96NH3 1257 aa5.92□□□□□ -1.46
HIPK3-206ENST00000534262 ROBO2Q9HCK4 1378 aa5.92□□□□□ -1.46
HIPK3-206ENST00000534262 PPM1GO15355 546 aaPredicted RBP5.91□□□□□ -1.46
HIPK3-206ENST00000534262 RACK1P63244 317 aaKnown RBP5.91□□□□□ -1.46
HIPK3-206ENST00000534262 MPP2Q14168 576 aa5.91□□□□□ -1.46
HIPK3-206ENST00000534262 SNAP47Q5SQN1 464 aa5.91□□□□□ -1.46
HIPK3-206ENST00000534262 OGFOD3Q6PK18 319 aa5.91□□□□□ -1.46
HIPK3-206ENST00000534262 TANGO6Q9C0B7 1094 aa5.91□□□□□ -1.46
HIPK3-206ENST00000534262 PPP1R1BQ9UD71 204 aaPredicted RBP5.91□□□□□ -1.46
HIPK3-206ENST00000534262 DDX41Q9UJV9 622 aaKnown RBP5.91□□□□□ -1.46
HIPK3-206ENST00000534262 RNF112Q9ULX5 631 aa5.91□□□□□ -1.46
HIPK3-206ENST00000534262 PRR36Q9H6K5 1346 aa5.91□□□□□ -1.46
HIPK3-206ENST00000534262 PRAMEF27A3QJZ7 478 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 FAM170BA6NMN3 283 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 WDR64B1ANS9 1081 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 GRK4P32298 578 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 CAP2P40123 477 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 SLBPQ14493 270 aaKnown RBP eCLIP5.9□□□□□ -1.46
HIPK3-206ENST00000534262 ZNF394Q53GI3 561 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 ZNF662Q6ZS27 426 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 CDC37L1Q7L3B6 337 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 USP48Q86UV5 1035 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 FBXL6Q8N531 539 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 KCT2Q8NC54 265 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 FBXO27Q8NI29 283 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 HIRIP3Q9BW71 556 aaPredicted RBP5.9□□□□□ -1.46
HIPK3-206ENST00000534262 LRRC3Q9BY71 257 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 FBRSQ9HAH7 460 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 SSU72Q9NP77 194 aaKnown RBP5.9□□□□□ -1.46
HIPK3-206ENST00000534262 PICK1Q9NRD5 415 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 TBX22Q9Y458 520 aa5.9□□□□□ -1.46
HIPK3-206ENST00000534262 SUPT16HQ9Y5B9 1047 aaKnown RBP5.9□□□□□ -1.46
HIPK3-206ENST00000534262 CRKP46108 304 aa5.89□□□□□ -1.47
HIPK3-206ENST00000534262 ETF1P62495 437 aaKnown RBP5.89□□□□□ -1.47
HIPK3-206ENST00000534262 CDK5R2Q13319 367 aa5.89□□□□□ -1.47
HIPK3-206ENST00000534262 NKG7Q16617 165 aa5.89□□□□□ -1.47
HIPK3-206ENST00000534262 FAM214BQ7L5A3 538 aa5.89□□□□□ -1.47
HIPK3-206ENST00000534262 HID1Q8IV36 788 aa5.89□□□□□ -1.47
HIPK3-206ENST00000534262 EAF1Q96JC9 268 aaPredicted RBP5.89□□□□□ -1.47
HIPK3-206ENST00000534262 NT5C1AQ9BXI3 368 aa5.89□□□□□ -1.47
HIPK3-206ENST00000534262 ACBD3Q9H3P7 528 aa5.89□□□□□ -1.47
HIPK3-206ENST00000534262 POLR3KQ9Y2Y1 108 aaPredicted RBP5.89□□□□□ -1.47
HIPK3-206ENST00000534262 BPNT1O95861 308 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 TGFB1P01137 390 aa5.88□□□□□ -1.47
HIPK3-206ENST00000534262 NCLP19338 710 aaKnown RBP5.88□□□□□ -1.47
HIPK3-206ENST00000534262 CYP27A1Q02318 531 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms