RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 OTOP1Q7RTM1 612 aa13.21□□□□□ -0.29
SDHD-208ENST00000534010 CERS3Q8IU89 383 aa13.21□□□□□ -0.29
SDHD-208ENST00000534010 TEX11Q8IYF3 940 aa13.21□□□□□ -0.29
SDHD-208ENST00000534010 CLASRPQ8N2M8 674 aaKnown RBP13.21□□□□□ -0.29
SDHD-208ENST00000534010 DHX36Q9H2U1 1008 aaKnown RBP13.21□□□□□ -0.29
SDHD-208ENST00000534010 HPS5Q9UPZ3 1129 aa13.21□□□□□ -0.29
SDHD-208ENST00000534010 BAG3O95817 575 aa13.2□□□□□ -0.3
SDHD-208ENST00000534010 DYNLL1P63167 89 aaKnown RBP13.2□□□□□ -0.3
SDHD-208ENST00000534010 SP3Q02447 781 aa13.2□□□□□ -0.3
SDHD-208ENST00000534010 SLC45A1Q9Y2W3 748 aa13.2□□□□□ -0.3
SDHD-208ENST00000534010 DOCK3Q8IZD9 2030 aa13.2□□□□□ -0.3
SDHD-208ENST00000534010 BCRP11274 1271 aa13.19□□□□□ -0.3
SDHD-208ENST00000534010 CAP2P40123 477 aa13.19□□□□□ -0.3
SDHD-208ENST00000534010 RRP1P56182 461 aaKnown RBP13.19□□□□□ -0.3
SDHD-208ENST00000534010 JAG1P78504 1218 aa13.19□□□□□ -0.3
SDHD-208ENST00000534010 TAF1CQ15572 869 aaPredicted RBP13.19□□□□□ -0.3
SDHD-208ENST00000534010 ZFYVE28Q9HCC9 887 aa13.19□□□□□ -0.3
SDHD-208ENST00000534010 PI4KBQ9UBF8 816 aa13.19□□□□□ -0.3
SDHD-208ENST00000534010 PCDHB15Q9Y5E8 787 aa13.19□□□□□ -0.3
SDHD-208ENST00000534010 FAM196BA6NMK8 535 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 PDE6AP16499 860 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 CYP7A1P22680 504 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 CTGFP29279 349 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 TTF1Q15361 905 aaPredicted RBP13.18□□□□□ -0.3
SDHD-208ENST00000534010 SH3D19Q5HYK7 790 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 FOXP4Q8IVH2 680 aaPredicted RBP13.18□□□□□ -0.3
SDHD-208ENST00000534010 MAGEB6Q8N7X4 407 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 CD99L2Q8TCZ2 262 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 TGFBRAP1Q8WUH2 860 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 ERO1AQ96HE7 468 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 HAUS7Q99871 368 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 TBC1D2Q9BYX2 928 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 EHD4Q9H223 541 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 GINM1Q9NU53 330 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.18□□□□□ -0.3
SDHD-208ENST00000534010 PTPN22Q9Y2R2 807 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 ZHX2Q9Y6X8 837 aa13.18□□□□□ -0.3
SDHD-208ENST00000534010 BAZ2AQ9UIF9 1905 aaKnown RBP13.17□□□□□ -0.3
SDHD-208ENST00000534010 SALL3Q9BXA9 1300 aa13.17□□□□□ -0.3
SDHD-208ENST00000534010 IDH1O75874 414 aaKnown RBP13.17□□□□□ -0.3
SDHD-208ENST00000534010 GABPAQ06546 454 aa13.17□□□□□ -0.3
SDHD-208ENST00000534010 TATDN1Q6P1N9 297 aa13.17□□□□□ -0.3
SDHD-208ENST00000534010 MAPKAPK5Q8IW41 473 aa13.17□□□□□ -0.3
SDHD-208ENST00000534010 ZSCAN29Q8IWY8 852 aaPredicted RBP13.17□□□□□ -0.3
SDHD-208ENST00000534010 ARMC5Q96C12 935 aa13.17□□□□□ -0.3
SDHD-208ENST00000534010 WDR18Q9BV38 432 aa13.17□□□□□ -0.3
SDHD-208ENST00000534010 LRRCC1Q9C099 1032 aa13.17□□□□□ -0.3
SDHD-208ENST00000534010 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.17□□□□□ -0.3
SDHD-208ENST00000534010 GREB1LQ9C091 1923 aaPredicted RBP13.16□□□□□ -0.3
SDHD-208ENST00000534010 PDHXO00330 501 aa13.16□□□□□ -0.3
SDHD-208ENST00000534010 IFIT2P09913 472 aaKnown RBP13.16□□□□□ -0.3
SDHD-208ENST00000534010 ADD2P35612 726 aa13.16□□□□□ -0.3
SDHD-208ENST00000534010 LACTBP83111 547 aaPredicted RBP13.16□□□□□ -0.3
SDHD-208ENST00000534010 EDC3Q96F86 508 aaKnown RBP13.16□□□□□ -0.3
SDHD-208ENST00000534010 PALD1Q9ULE6 856 aa13.16□□□□□ -0.3
SDHD-208ENST00000534010 RLFQ13129 1914 aa13.15□□□□□ -0.3
SDHD-208ENST00000534010 CCDC85CA6NKD9 419 aa13.15□□□□□ -0.3
SDHD-208ENST00000534010 SHROOM1Q2M3G4 852 aaPredicted RBP13.15□□□□□ -0.3
SDHD-208ENST00000534010 FASTKD5Q7L8L6 764 aaKnown RBP13.15□□□□□ -0.3
SDHD-208ENST00000534010 CCDC84Q86UT8 332 aaPredicted RBP13.15□□□□□ -0.3
SDHD-208ENST00000534010 MIGA1Q8NAN2 632 aa13.15□□□□□ -0.3
SDHD-208ENST00000534010 PROCA1Q8NCQ7 364 aaPredicted RBP13.15□□□□□ -0.3
SDHD-208ENST00000534010 NOL10Q9BSC4 688 aaKnown RBP13.15□□□□□ -0.3
SDHD-208ENST00000534010 EFCC1Q9HA90 598 aa13.15□□□□□ -0.3
SDHD-208ENST00000534010 PICK1Q9NRD5 415 aa13.15□□□□□ -0.3
SDHD-208ENST00000534010 PAG1Q9NWQ8 432 aa13.15□□□□□ -0.3
SDHD-208ENST00000534010 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.15□□□□□ -0.3
SDHD-208ENST00000534010 TAOK2Q9UL54 1235 aa13.15□□□□□ -0.3
SDHD-208ENST00000534010 TRIM17Q9Y577 477 aa13.15□□□□□ -0.3
SDHD-208ENST00000534010 PLXNB2O15031 1838 aa13.15□□□□□ -0.3
SDHD-208ENST00000534010 ZNF532Q9HCE3 1301 aa13.14□□□□□ -0.31
SDHD-208ENST00000534010 MYH8P13535 1937 aa13.14□□□□□ -0.31
SDHD-208ENST00000534010 GOLIM4O00461 696 aa13.14□□□□□ -0.31
SDHD-208ENST00000534010 SMARCA5O60264 1052 aaPredicted RBP13.14□□□□□ -0.31
SDHD-208ENST00000534010 GNRH1P01148 92 aa13.14□□□□□ -0.31
SDHD-208ENST00000534010 UBE3CQ15386 1083 aa13.14□□□□□ -0.31
SDHD-208ENST00000534010 SLC9C2Q5TAH2 1124 aa13.14□□□□□ -0.31
SDHD-208ENST00000534010 ZNF280CQ8ND82 737 aa13.14□□□□□ -0.31
SDHD-208ENST00000534010 ARHGAP39Q9C0H5 1083 aa13.14□□□□□ -0.31
SDHD-208ENST00000534010 AGTPBP1Q9UPW5 1226 aa13.14□□□□□ -0.31
SDHD-208ENST00000534010 USP17L5A8MUK1 530 aa13.13□□□□□ -0.31
SDHD-208ENST00000534010 APBB1O00213 710 aa13.13□□□□□ -0.31
SDHD-208ENST00000534010 CHGBP05060 677 aa13.13□□□□□ -0.31
SDHD-208ENST00000534010 ASNSP08243 561 aa13.13□□□□□ -0.31
SDHD-208ENST00000534010 SHMT1P34896 483 aa13.13□□□□□ -0.31
SDHD-208ENST00000534010 PLCD1P51178 756 aa13.13□□□□□ -0.31
SDHD-208ENST00000534010 TREML2Q5T2D2 321 aa13.13□□□□□ -0.31
SDHD-208ENST00000534010 BOLA2Q9H3K6 86 aa13.13□□□□□ -0.31
SDHD-208ENST00000534010 DCP1AQ9NPI6 582 aaPredicted RBP13.13□□□□□ -0.31
SDHD-208ENST00000534010 PARP14Q460N5 1801 aa13.13□□□□□ -0.31
SDHD-208ENST00000534010 CYP2C8P10632 490 aa13.12□□□□□ -0.31
SDHD-208ENST00000534010 HOXA7P31268 230 aaPredicted RBP13.12□□□□□ -0.31
SDHD-208ENST00000534010 GUCY1A2P33402 732 aa13.12□□□□□ -0.31
SDHD-208ENST00000534010 BACE1P56817 501 aa13.12□□□□□ -0.31
SDHD-208ENST00000534010 EVX2Q03828 476 aa13.12□□□□□ -0.31
SDHD-208ENST00000534010 SPP2Q13103 211 aa13.12□□□□□ -0.31
SDHD-208ENST00000534010 SLFNL1Q499Z3 407 aa13.12□□□□□ -0.31
SDHD-208ENST00000534010 LCORLQ8N3X6 602 aa13.12□□□□□ -0.31
SDHD-208ENST00000534010 PI4K2BQ8TCG2 481 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms