RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 PRAMEF18Q5VWM3 479 aa18.57■□□□□ 0.56
CTTN-215ENST00000533931 ARMC9Q7Z3E5 817 aa18.57■□□□□ 0.56
CTTN-215ENST00000533931 CDAN1Q8IWY9 1227 aa18.57■□□□□ 0.56
CTTN-215ENST00000533931 C2orf69Q8N8R5 385 aa18.57■□□□□ 0.56
CTTN-215ENST00000533931 LSG1Q9H089 658 aaKnown RBP18.57■□□□□ 0.56
CTTN-215ENST00000533931 ZNF287Q9HBT7 754 aa18.57■□□□□ 0.56
CTTN-215ENST00000533931 GBA2Q9HCG7 927 aaPredicted RBP18.57■□□□□ 0.56
CTTN-215ENST00000533931 ZNF112Q9UJU3 913 aa18.57■□□□□ 0.56
CTTN-215ENST00000533931 IREB2P48200 963 aaKnown RBP18.56■□□□□ 0.56
CTTN-215ENST00000533931 PLCD1P51178 756 aa18.56■□□□□ 0.56
CTTN-215ENST00000533931 PPARAQ07869 468 aa18.56■□□□□ 0.56
CTTN-215ENST00000533931 CST9Q5W186 159 aa18.56■□□□□ 0.56
CTTN-215ENST00000533931 TATDN1Q6P1N9 297 aa18.56■□□□□ 0.56
CTTN-215ENST00000533931 CRACR2BQ8N4Y2 399 aaPredicted RBP18.56■□□□□ 0.56
CTTN-215ENST00000533931 TRIM34Q9BYJ4 488 aa18.56■□□□□ 0.56
CTTN-215ENST00000533931 ANO2Q9NQ90 1003 aa18.56■□□□□ 0.56
CTTN-215ENST00000533931 GINM1Q9NU53 330 aa18.56■□□□□ 0.56
CTTN-215ENST00000533931 POLR2AP24928 1970 aaKnown RBP18.55■□□□□ 0.56
CTTN-215ENST00000533931 MYH1P12882 1939 aa18.55■□□□□ 0.56
CTTN-215ENST00000533931 TMEM88BA6NKF7 163 aa18.55■□□□□ 0.56
CTTN-215ENST00000533931 IMMTQ16891 758 aaKnown RBP18.55■□□□□ 0.56
CTTN-215ENST00000533931 DLK2Q6UY11 383 aa18.55■□□□□ 0.56
CTTN-215ENST00000533931 C16orf86Q6ZW13 317 aa18.55■□□□□ 0.56
CTTN-215ENST00000533931 KLRG1Q96E93 195 aa18.55■□□□□ 0.56
CTTN-215ENST00000533931 HHIPL1Q96JK4 782 aa18.55■□□□□ 0.56
CTTN-215ENST00000533931 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.55■□□□□ 0.56
CTTN-215ENST00000533931 LAMB1P07942 1786 aa18.55■□□□□ 0.56
CTTN-215ENST00000533931 TRPM7Q96QT4 1865 aa18.54■□□□□ 0.56
CTTN-215ENST00000533931 SIPA1L1O43166 1804 aa18.54■□□□□ 0.56
CTTN-215ENST00000533931 USP2O75604 605 aaPredicted RBP18.54■□□□□ 0.56
CTTN-215ENST00000533931 APLP1P51693 650 aa18.54■□□□□ 0.56
CTTN-215ENST00000533931 PTH1RQ03431 593 aa18.54■□□□□ 0.56
CTTN-215ENST00000533931 LDLRAD1Q5T700 205 aa18.54■□□□□ 0.56
CTTN-215ENST00000533931 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.54■□□□□ 0.56
CTTN-215ENST00000533931 PHF20L1A8MW92 1017 aa18.53■□□□□ 0.56
CTTN-215ENST00000533931 MINDY4BA8MYZ0 360 aa18.53■□□□□ 0.56
CTTN-215ENST00000533931 ZNF213O14771 459 aa18.53■□□□□ 0.56
CTTN-215ENST00000533931 FGRP09769 529 aa18.53■□□□□ 0.56
CTTN-215ENST00000533931 CYP2D6P10635 497 aa18.53■□□□□ 0.56
CTTN-215ENST00000533931 PDE4BQ07343 736 aa18.53■□□□□ 0.56
CTTN-215ENST00000533931 NOL9Q5SY16 702 aaKnown RBP18.53■□□□□ 0.56
CTTN-215ENST00000533931 ANKRD13AQ8IZ07 590 aa18.53■□□□□ 0.56
CTTN-215ENST00000533931 CCDC17Q96LX7 622 aa18.53■□□□□ 0.56
CTTN-215ENST00000533931 RNF41Q9H4P4 317 aaPredicted RBP18.53■□□□□ 0.56
CTTN-215ENST00000533931 DNAJC18Q9H819 358 aa18.53■□□□□ 0.56
CTTN-215ENST00000533931 ZNF408Q9H9D4 720 aa18.53■□□□□ 0.56
CTTN-215ENST00000533931 CREBZFQ9NS37 354 aa18.53■□□□□ 0.56
CTTN-215ENST00000533931 CYP2D7A0A087X1C5 515 aa18.52■□□□□ 0.56
CTTN-215ENST00000533931 CTNND1O60716 968 aaKnown RBP18.52■□□□□ 0.56
CTTN-215ENST00000533931 MAP3K9P80192 1104 aa18.52■□□□□ 0.56
CTTN-215ENST00000533931 FMR1Q06787 632 aaKnown RBP eCLIP18.52■□□□□ 0.56
CTTN-215ENST00000533931 C8orf34Q49A92 452 aa18.52■□□□□ 0.56
CTTN-215ENST00000533931 MIGA2Q7L4E1 593 aa18.52■□□□□ 0.56
CTTN-215ENST00000533931 ANGEL1Q9UNK9 670 aaKnown RBP18.52■□□□□ 0.56
CTTN-215ENST00000533931 RBM8AQ9Y5S9 174 aaKnown RBP18.52■□□□□ 0.56
CTTN-215ENST00000533931 TLL2Q9Y6L7 1015 aa18.52■□□□□ 0.56
CTTN-215ENST00000533931 LAMA4Q16363 1823 aa18.51■□□□□ 0.55
CTTN-215ENST00000533931 ORC4O43929 436 aa18.51■□□□□ 0.55
CTTN-215ENST00000533931 SHMT1P34896 483 aa18.51■□□□□ 0.55
CTTN-215ENST00000533931 CDK8P49336 464 aa18.51■□□□□ 0.55
CTTN-215ENST00000533931 C1QTNF8P60827 252 aa18.51■□□□□ 0.55
CTTN-215ENST00000533931 TTLL12Q14166 644 aaPredicted RBP18.51■□□□□ 0.55
CTTN-215ENST00000533931 NECTIN1Q15223 517 aa18.51■□□□□ 0.55
CTTN-215ENST00000533931 RNF20Q5VTR2 975 aa18.51■□□□□ 0.55
CTTN-215ENST00000533931 SAPCD2Q86UD0 394 aa18.51■□□□□ 0.55
CTTN-215ENST00000533931 STAG1Q8WVM7 1258 aa18.51■□□□□ 0.55
CTTN-215ENST00000533931 WRNIP1Q96S55 665 aa18.51■□□□□ 0.55
CTTN-215ENST00000533931 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.51■□□□□ 0.55
CTTN-215ENST00000533931 BAZ2AQ9UIF9 1905 aaKnown RBP18.51■□□□□ 0.55
CTTN-215ENST00000533931 TBC1D2Q9BYX2 928 aa18.5■□□□□ 0.55
CTTN-215ENST00000533931 CSADQ9Y600 493 aa18.5■□□□□ 0.55
CTTN-215ENST00000533931 ASNSP08243 561 aa18.49■□□□□ 0.55
CTTN-215ENST00000533931 CAP2P40123 477 aa18.49■□□□□ 0.55
CTTN-215ENST00000533931 SLC4A8Q2Y0W8 1093 aa18.49■□□□□ 0.55
CTTN-215ENST00000533931 AKNAD1Q5T1N1 836 aa18.49■□□□□ 0.55
CTTN-215ENST00000533931 SCYL3Q8IZE3 742 aa18.49■□□□□ 0.55
CTTN-215ENST00000533931 DYNLL2Q96FJ2 89 aa18.49■□□□□ 0.55
CTTN-215ENST00000533931 CNNM2Q9H8M5 875 aa18.49■□□□□ 0.55
CTTN-215ENST00000533931 PLIN4Q96Q06 1357 aa18.48■□□□□ 0.55
CTTN-215ENST00000533931 CYP21A2P08686 494 aa18.48■□□□□ 0.55
CTTN-215ENST00000533931 HUNKP57058 714 aa18.48■□□□□ 0.55
CTTN-215ENST00000533931 EVX2Q03828 476 aa18.48■□□□□ 0.55
CTTN-215ENST00000533931 TSGA10IPQ3SY00 556 aa18.48■□□□□ 0.55
CTTN-215ENST00000533931 CERKLQ49MI3 558 aaPredicted RBP18.48■□□□□ 0.55
CTTN-215ENST00000533931 MFSD6Q6ZSS7 791 aa18.48■□□□□ 0.55
CTTN-215ENST00000533931 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.48■□□□□ 0.55
CTTN-215ENST00000533931 KCNB2Q92953 911 aa18.48■□□□□ 0.55
CTTN-215ENST00000533931 NBPF3Q9H094 633 aa18.48■□□□□ 0.55
CTTN-215ENST00000533931 MKNK2Q9HBH9 465 aa18.48■□□□□ 0.55
CTTN-215ENST00000533931 FAM196BA6NMK8 535 aa18.47■□□□□ 0.55
CTTN-215ENST00000533931 RASA1P20936 1047 aa18.47■□□□□ 0.55
CTTN-215ENST00000533931 HSPA4P34932 840 aa18.47■□□□□ 0.55
CTTN-215ENST00000533931 PRKG1Q13976 671 aa18.47■□□□□ 0.55
CTTN-215ENST00000533931 VGLL4Q14135 290 aa18.47■□□□□ 0.55
CTTN-215ENST00000533931 PPP4R3BQ5MIZ7 849 aa18.47■□□□□ 0.55
CTTN-215ENST00000533931 CREB3L3Q68CJ9 461 aa18.47■□□□□ 0.55
CTTN-215ENST00000533931 TBC1D10CQ8IV04 446 aa18.47■□□□□ 0.55
CTTN-215ENST00000533931 SLC44A5Q8NCS7 719 aa18.47■□□□□ 0.55
CTTN-215ENST00000533931 USP26Q9BXU7 913 aa18.47■□□□□ 0.55
CTTN-215ENST00000533931 PICK1Q9NRD5 415 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms