RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 ZAP70P43403 619 aa12.67□□□□□ -0.38
CLP1-206ENST00000533905 FLT3LGP49771 235 aa12.67□□□□□ -0.38
CLP1-206ENST00000533905 MVPQ14764 893 aaKnown RBP12.67□□□□□ -0.38
CLP1-206ENST00000533905 ERICH6Q7L0X2 663 aa12.67□□□□□ -0.38
CLP1-206ENST00000533905 MAPKAPK5Q8IW41 473 aa12.67□□□□□ -0.38
CLP1-206ENST00000533905 ANKRD13CQ8N6S4 541 aa12.67□□□□□ -0.38
CLP1-206ENST00000533905 HOOK2Q96ED9 719 aa12.67□□□□□ -0.38
CLP1-206ENST00000533905 PARK7Q99497 189 aaKnown RBP12.67□□□□□ -0.38
CLP1-206ENST00000533905 AATFQ9NY61 560 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLP1-206ENST00000533905 RAI14Q9P0K7 980 aa12.67□□□□□ -0.38
CLP1-206ENST00000533905 TRIOBPQ9H2D6 2365 aa12.67□□□□□ -0.38
CLP1-206ENST00000533905 GDF11O95390 407 aa12.66□□□□□ -0.38
CLP1-206ENST00000533905 HMGCS2P54868 508 aa12.66□□□□□ -0.38
CLP1-206ENST00000533905 SPP2Q13103 211 aa12.66□□□□□ -0.38
CLP1-206ENST00000533905 TNNI3KQ59H18 835 aa12.66□□□□□ -0.38
CLP1-206ENST00000533905 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
CLP1-206ENST00000533905 TEX11Q8IYF3 940 aa12.66□□□□□ -0.38
CLP1-206ENST00000533905 RAET1EQ8TD07 263 aa12.66□□□□□ -0.38
CLP1-206ENST00000533905 DIS3LQ8TF46 1054 aaKnown RBP12.66□□□□□ -0.38
CLP1-206ENST00000533905 ANTXR1Q9H6X2 564 aa12.66□□□□□ -0.38
CLP1-206ENST00000533905 PICK1Q9NRD5 415 aa12.66□□□□□ -0.38
CLP1-206ENST00000533905 DBNLQ9UJU6 430 aaKnown RBP12.66□□□□□ -0.38
CLP1-206ENST00000533905 FPGT-TNNI3KV9GXZ4 949 aa12.66□□□□□ -0.38
CLP1-206ENST00000533905 VCANP13611 3396 aa12.66□□□□□ -0.38
CLP1-206ENST00000533905 SPTBN5Q9NRC6 3674 aaKnown RBP12.65□□□□□ -0.38
CLP1-206ENST00000533905 ALPK3Q96L96 1907 aa12.65□□□□□ -0.38
CLP1-206ENST00000533905 CTNND1O60716 968 aaKnown RBP12.65□□□□□ -0.38
CLP1-206ENST00000533905 INHAP05111 366 aa12.65□□□□□ -0.38
CLP1-206ENST00000533905 KIF22Q14807 665 aa12.65□□□□□ -0.38
CLP1-206ENST00000533905 NBPF11Q86T75 865 aa12.65□□□□□ -0.38
CLP1-206ENST00000533905 CCDC8Q9H0W5 538 aaPredicted RBP12.65□□□□□ -0.38
CLP1-206ENST00000533905 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLP1-206ENST00000533905 TXNRD2Q9NNW7 524 aa12.65□□□□□ -0.38
CLP1-206ENST00000533905 SAP30BPQ9UHR5 308 aaKnown RBP12.65□□□□□ -0.38
CLP1-206ENST00000533905 AGTPBP1Q9UPW5 1226 aa12.65□□□□□ -0.38
CLP1-206ENST00000533905 COL2A1P02458 1487 aaPredicted RBP12.65□□□□□ -0.38
CLP1-206ENST00000533905 FLT1P17948 1338 aa12.64□□□□□ -0.39
CLP1-206ENST00000533905 SMIM22K7EJ46 135 aa12.64□□□□□ -0.39
CLP1-206ENST00000533905 CHGBP05060 677 aa12.64□□□□□ -0.39
CLP1-206ENST00000533905 GJA8P48165 433 aa12.64□□□□□ -0.39
CLP1-206ENST00000533905 SLFNL1Q499Z3 407 aa12.64□□□□□ -0.39
CLP1-206ENST00000533905 ZGPATQ8N5A5 531 aaKnown RBP12.64□□□□□ -0.39
CLP1-206ENST00000533905 SSH3Q8TE77 659 aa12.64□□□□□ -0.39
CLP1-206ENST00000533905 U2AF1L4Q8WU68 220 aaKnown RBP12.64□□□□□ -0.39
CLP1-206ENST00000533905 TGFBRAP1Q8WUH2 860 aa12.64□□□□□ -0.39
CLP1-206ENST00000533905 EAF2Q96CJ1 260 aaPredicted RBP12.64□□□□□ -0.39
CLP1-206ENST00000533905 RNF208Q9H0X6 261 aa12.64□□□□□ -0.39
CLP1-206ENST00000533905 PRO3102Q9H379 93 aa12.64□□□□□ -0.39
CLP1-206ENST00000533905 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
CLP1-206ENST00000533905 DDX60LQ5H9U9 1706 aaKnown RBP12.64□□□□□ -0.39
CLP1-206ENST00000533905 FOCADQ5VW36 1801 aa12.64□□□□□ -0.39
CLP1-206ENST00000533905 ADCY3O60266 1144 aa12.63□□□□□ -0.39
CLP1-206ENST00000533905 TBC1D12O60347 775 aa12.63□□□□□ -0.39
CLP1-206ENST00000533905 GJB1P08034 283 aa12.63□□□□□ -0.39
CLP1-206ENST00000533905 CAP2P40123 477 aa12.63□□□□□ -0.39
CLP1-206ENST00000533905 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
CLP1-206ENST00000533905 FCGRTP55899 365 aa12.63□□□□□ -0.39
CLP1-206ENST00000533905 HNRNPUQ00839 825 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLP1-206ENST00000533905 MTMR2Q13614 643 aa12.63□□□□□ -0.39
CLP1-206ENST00000533905 MIGA1Q8NAN2 632 aa12.63□□□□□ -0.39
CLP1-206ENST00000533905 ASCC2Q9H1I8 757 aaPredicted RBP12.63□□□□□ -0.39
CLP1-206ENST00000533905 TAOK2Q9UL54 1235 aa12.63□□□□□ -0.39
CLP1-206ENST00000533905 PALD1Q9ULE6 856 aa12.63□□□□□ -0.39
CLP1-206ENST00000533905 AKAP2Q9Y2D5 859 aa12.63□□□□□ -0.39
CLP1-206ENST00000533905 SOX1O00570 391 aaPredicted RBP12.62□□□□□ -0.39
CLP1-206ENST00000533905 TNPO2O14787 897 aaKnown RBP12.62□□□□□ -0.39
CLP1-206ENST00000533905 ZBTB7BO15156 539 aaPredicted RBP12.62□□□□□ -0.39
CLP1-206ENST00000533905 ATP8B2P98198 1209 aa12.62□□□□□ -0.39
CLP1-206ENST00000533905 G3BP1Q13283 466 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLP1-206ENST00000533905 SPTY2D1Q68D10 685 aaPredicted RBP12.62□□□□□ -0.39
CLP1-206ENST00000533905 PANK1Q8TE04 598 aa12.62□□□□□ -0.39
CLP1-206ENST00000533905 BIN2Q9UBW5 565 aaPredicted RBP12.62□□□□□ -0.39
CLP1-206ENST00000533905 GJD2Q9UKL4 321 aa12.62□□□□□ -0.39
CLP1-206ENST00000533905 DOCK3Q8IZD9 2030 aa12.62□□□□□ -0.39
CLP1-206ENST00000533905 GNRH1P01148 92 aa12.61□□□□□ -0.39
CLP1-206ENST00000533905 PRMT2P55345 433 aa12.61□□□□□ -0.39
CLP1-206ENST00000533905 TTC39AQ5SRH9 613 aa12.61□□□□□ -0.39
CLP1-206ENST00000533905 GORABQ5T7V8 394 aa12.61□□□□□ -0.39
CLP1-206ENST00000533905 CEP85Q6P2H3 762 aa12.61□□□□□ -0.39
CLP1-206ENST00000533905 FASTKD5Q7L8L6 764 aaKnown RBP12.61□□□□□ -0.39
CLP1-206ENST00000533905 ZNF280CQ8ND82 737 aa12.61□□□□□ -0.39
CLP1-206ENST00000533905 SMCR8Q8TEV9 937 aaPredicted RBP12.61□□□□□ -0.39
CLP1-206ENST00000533905 EDC3Q96F86 508 aaKnown RBP12.61□□□□□ -0.39
CLP1-206ENST00000533905 DEFB118Q96PH6 123 aa12.61□□□□□ -0.39
CLP1-206ENST00000533905 PAK6Q9NQU5 681 aaPredicted RBP12.61□□□□□ -0.39
CLP1-206ENST00000533905 LRP2BPQ9P2M1 347 aa12.61□□□□□ -0.39
CLP1-206ENST00000533905 EXOC6BQ9Y2D4 811 aa12.61□□□□□ -0.39
CLP1-206ENST00000533905 SLC45A1Q9Y2W3 748 aa12.61□□□□□ -0.39
CLP1-206ENST00000533905 ZBED9Q6R2W3 1325 aa12.61□□□□□ -0.39
CLP1-206ENST00000533905 NPM3O75607 178 aaKnown RBP12.6□□□□□ -0.39
CLP1-206ENST00000533905 SURF6O75683 361 aaKnown RBP12.6□□□□□ -0.39
CLP1-206ENST00000533905 CNMDO75829 334 aa12.6□□□□□ -0.39
CLP1-206ENST00000533905 FARP2O94887 1054 aaPredicted RBP12.6□□□□□ -0.39
CLP1-206ENST00000533905 ARHGEF6Q15052 776 aa12.6□□□□□ -0.39
CLP1-206ENST00000533905 Q3C1V9 767 aa12.6□□□□□ -0.39
CLP1-206ENST00000533905 SH3D19Q5HYK7 790 aa12.6□□□□□ -0.39
CLP1-206ENST00000533905 ZKSCAN2Q63HK3 967 aa12.6□□□□□ -0.39
CLP1-206ENST00000533905 NAA16Q6N069 864 aaPredicted RBP12.6□□□□□ -0.39
CLP1-206ENST00000533905 METTL16Q86W50 562 aaKnown RBP12.6□□□□□ -0.39
CLP1-206ENST00000533905 SLAIN1Q8ND83 568 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms