RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 GOLGA6L9A6NEM1 432 aa14.07□□□□□ -0.16
RAD50-209ENST00000533482 H7C1W4 665 aa14.07□□□□□ -0.16
RAD50-209ENST00000533482 DYNLL1P63167 89 aaKnown RBP14.07□□□□□ -0.16
RAD50-209ENST00000533482 GPR101Q96P66 508 aaPredicted RBP14.07□□□□□ -0.16
RAD50-209ENST00000533482 CYP2D7A0A087X1C5 515 aa14.07□□□□□ -0.16
RAD50-209ENST00000533482 ARID5AQ03989 594 aa14.07□□□□□ -0.16
RAD50-209ENST00000533482 UBXN1Q04323 297 aa14.07□□□□□ -0.16
RAD50-209ENST00000533482 BAG1Q99933 345 aaPredicted RBP14.07□□□□□ -0.16
RAD50-209ENST00000533482 PRM3Q9NNZ6 103 aa14.07□□□□□ -0.16
RAD50-209ENST00000533482 CRB1P82279 1406 aa14.07□□□□□ -0.16
RAD50-209ENST00000533482 ZNF500O60304 480 aaPredicted RBP14.07□□□□□ -0.16
RAD50-209ENST00000533482 USO1O60763 962 aaKnown RBP14.07□□□□□ -0.16
RAD50-209ENST00000533482 PARP1P09874 1014 aaKnown RBP14.07□□□□□ -0.16
RAD50-209ENST00000533482 CCDC175P0C221 793 aa14.07□□□□□ -0.16
RAD50-209ENST00000533482 GOLGA8HP0CJ92 632 aa14.07□□□□□ -0.16
RAD50-209ENST00000533482 U2AF2P26368 475 aaKnown RBP eCLIP14.07□□□□□ -0.165e-6■■■■□ 24.7
RAD50-209ENST00000533482 ZFP91Q96JP5 570 aaPredicted RBP14.07□□□□□ -0.16
RAD50-209ENST00000533482 TSPYL1Q9H0U9 437 aa14.07□□□□□ -0.16
RAD50-209ENST00000533482 RMND1Q9NWS8 449 aa14.07□□□□□ -0.16
RAD50-209ENST00000533482 GUCA1BQ9UMX6 200 aa14.07□□□□□ -0.16
RAD50-209ENST00000533482 MYO3AQ8NEV4 1616 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 USP8P40818 1118 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 BMS1Q14692 1282 aaKnown RBP14.06□□□□□ -0.16
RAD50-209ENST00000533482 FCHSD1Q86WN1 690 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 MYRIPQ8NFW9 859 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 INCENPQ9NQS7 918 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 PKD2L1Q9P0L9 805 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 SERTAD1Q9UHV2 236 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 TNKSO95271 1327 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 CUTAO60888 179 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 NLRP12P59046 1061 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 MTX1Q13505 466 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 TNIP1Q15025 636 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 ZNF569Q5MCW4 686 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.06□□□□□ -0.16
RAD50-209ENST00000533482 KIAA0825Q8IV33 1275 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 SMARCC2Q8TAQ2 1214 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 CTAGE1Q96RT6 745 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 BLZF1Q9H2G9 400 aa14.06□□□□□ -0.16
RAD50-209ENST00000533482 QTRT2Q9H974 415 aaKnown RBP14.06□□□□□ -0.16
RAD50-209ENST00000533482 SP4Q02446 784 aa14.05□□□□□ -0.16
RAD50-209ENST00000533482 SPAG1Q07617 926 aa14.05□□□□□ -0.16
RAD50-209ENST00000533482 PIK3C2BO00750 1634 aa14.05□□□□□ -0.16
RAD50-209ENST00000533482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.05□□□□□ -0.16
RAD50-209ENST00000533482 TOB2Q14106 344 aaPredicted RBP14.05□□□□□ -0.16
RAD50-209ENST00000533482 IGSF22Q8N9C0 903 aa14.05□□□□□ -0.16
RAD50-209ENST00000533482 EEF2KMTQ96G04 330 aa14.05□□□□□ -0.16
RAD50-209ENST00000533482 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
RAD50-209ENST00000533482 USP31Q70CQ4 1352 aa14.05□□□□□ -0.16
RAD50-209ENST00000533482 PPP1R12BO60237 982 aaPredicted RBP14.05□□□□□ -0.16
RAD50-209ENST00000533482 PAFAH1B1P43034 410 aa14.05□□□□□ -0.16
RAD50-209ENST00000533482 NOP2P46087 812 aaKnown RBP14.05□□□□□ -0.16
RAD50-209ENST00000533482 C11orf57Q6ZUT1 292 aaPredicted RBP14.05□□□□□ -0.16
RAD50-209ENST00000533482 KRT222Q8N1A0 295 aa14.05□□□□□ -0.16
RAD50-209ENST00000533482 TTF2Q9UNY4 1162 aaKnown RBP14.05□□□□□ -0.16
RAD50-209ENST00000533482 CTNND2Q9UQB3 1225 aa14.05□□□□□ -0.16
RAD50-209ENST00000533482 PTPRUQ92729 1446 aa14.05□□□□□ -0.16
RAD50-209ENST00000533482 IQSEC2Q5JU85 1478 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 TXKP42681 527 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 SSR1P43307 286 aaKnown RBP14.04□□□□□ -0.16
RAD50-209ENST00000533482 CDR1P51861 262 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 RASGRF1Q13972 1273 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 LONRF3Q496Y0 759 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 TTC38Q5R3I4 469 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 IQCEQ6IPM2 695 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 TTC14Q96N46 770 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 EYA3Q99504 573 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 PIH1D3Q9NQM4 214 aaKnown RBP14.04□□□□□ -0.16
RAD50-209ENST00000533482 ZBTB21Q9ULJ3 1066 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.04□□□□□ -0.164e-7■■■□□ 16.4
RAD50-209ENST00000533482 FGFR1OPO95684 399 aaKnown RBP14.04□□□□□ -0.16
RAD50-209ENST00000533482 POSTNQ15063 836 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 CAPZA3Q96KX2 299 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 GBP3Q9H0R5 595 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 HDAC9Q9UKV0 1011 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 MYCNP04198 464 aaPredicted RBP14.04□□□□□ -0.16
RAD50-209ENST00000533482 MCAMP43121 646 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 APOA5Q6Q788 366 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 ARFGAP3Q9NP61 516 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 LAMC1P11047 1609 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 GOLGA6L10A6NI86 522 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 RHOXF2BP0C7M4 288 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 GNA11P29992 359 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 ADKP55263 362 aaKnown RBP14.04□□□□□ -0.16
RAD50-209ENST00000533482 ELF2Q15723 593 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 DPCR1Q3MIW9 517 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 DHX37Q8IY37 1157 aaKnown RBP14.04□□□□□ -0.16
RAD50-209ENST00000533482 LCORLQ8N3X6 602 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 FANCBQ8NB91 859 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 JDP2Q8WYK2 163 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 RHOXF2Q9BQY4 288 aa14.04□□□□□ -0.16
RAD50-209ENST00000533482 SPDYE3A6NKU9 549 aa14.03□□□□□ -0.16
RAD50-209ENST00000533482 TMCO5BA8MYB1 307 aa14.03□□□□□ -0.16
RAD50-209ENST00000533482 CIAO1O76071 339 aa14.03□□□□□ -0.16
RAD50-209ENST00000533482 SETQ01105 290 aaPredicted RBP14.03□□□□□ -0.16
RAD50-209ENST00000533482 RAD51AP2Q09MP3 1159 aa14.03□□□□□ -0.16
RAD50-209ENST00000533482 KRT79Q5XKE5 535 aa14.03□□□□□ -0.16
RAD50-209ENST00000533482 NOSTRINQ8IVI9 506 aa14.03□□□□□ -0.16
RAD50-209ENST00000533482 SYCP3Q8IZU3 236 aa14.03□□□□□ -0.16
RAD50-209ENST00000533482 TXLNBQ8N3L3 684 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms