RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 C12orf60Q5U649 245 aa13.46□□□□□ -0.25
GMDS-210ENST00000533279 TMEM39BQ9GZU3 492 aa13.46□□□□□ -0.25
GMDS-210ENST00000533279 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.46□□□□□ -0.257e-8■■■■□ 20.8
GMDS-210ENST00000533279 ASTN2O75129 1339 aaPredicted RBP13.45□□□□□ -0.26
GMDS-210ENST00000533279 MYH1P12882 1939 aa13.45□□□□□ -0.26
GMDS-210ENST00000533279 TTLL12Q14166 644 aaPredicted RBP13.45□□□□□ -0.26
GMDS-210ENST00000533279 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
GMDS-210ENST00000533279 AKNAD1Q5T1N1 836 aa13.45□□□□□ -0.26
GMDS-210ENST00000533279 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
GMDS-210ENST00000533279 ZNF444Q8N0Y2 327 aaPredicted RBP13.45□□□□□ -0.26
GMDS-210ENST00000533279 ESR2Q92731 530 aa13.45□□□□□ -0.26
GMDS-210ENST00000533279 MKRN1Q9UHC7 482 aaKnown RBP13.45□□□□□ -0.26
GMDS-210ENST00000533279 PGAP2Q9UHJ9 254 aa13.45□□□□□ -0.26
GMDS-210ENST00000533279 ANAPC4Q9UJX5 808 aa13.45□□□□□ -0.26
GMDS-210ENST00000533279 LAMB1P07942 1786 aa13.45□□□□□ -0.26
GMDS-210ENST00000533279 CNTNAP1P78357 1384 aa13.45□□□□□ -0.26
GMDS-210ENST00000533279 ROBO3Q96MS0 1386 aa13.45□□□□□ -0.26
GMDS-210ENST00000533279 ERICH2A1L162 156 aa13.44□□□□□ -0.26
GMDS-210ENST00000533279 POTECB2RU33 542 aa13.44□□□□□ -0.26
GMDS-210ENST00000533279 FGD1P98174 961 aa13.44□□□□□ -0.26
GMDS-210ENST00000533279 NECTIN1Q15223 517 aa13.44□□□□□ -0.26
GMDS-210ENST00000533279 CCDC178Q5BJE1 867 aa13.44□□□□□ -0.26
GMDS-210ENST00000533279 RRP12Q5JTH9 1297 aaKnown RBP13.44□□□□□ -0.26
GMDS-210ENST00000533279 USP48Q86UV5 1035 aa13.44□□□□□ -0.26
GMDS-210ENST00000533279 SMC1BQ8NDV3 1235 aa13.44□□□□□ -0.26
GMDS-210ENST00000533279 IL27Q8NEV9 243 aa13.44□□□□□ -0.26
GMDS-210ENST00000533279 NCOA7Q8NI08 942 aa13.44□□□□□ -0.26
GMDS-210ENST00000533279 STAG1Q8WVM7 1258 aa13.44□□□□□ -0.26
GMDS-210ENST00000533279 ZNF341Q9BYN7 854 aa13.44□□□□□ -0.26
GMDS-210ENST00000533279 CABP5Q9NP86 173 aa13.44□□□□□ -0.26
GMDS-210ENST00000533279 BAZ2AQ9UIF9 1905 aaKnown RBP13.43□□□□□ -0.26
GMDS-210ENST00000533279 DDTLA6NHG4 134 aaPredicted RBP13.43□□□□□ -0.26
GMDS-210ENST00000533279 TSPY2A6NKD2 308 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 ADM5C9JUS6 153 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 TBC1D12O60347 775 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 RANBP6O60518 1105 aaKnown RBP13.43□□□□□ -0.26
GMDS-210ENST00000533279 CYP21A2P08686 494 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 TSPY3P0CV98 308 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 TSPY8P0CW00 308 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 IREB2P48200 963 aaKnown RBP13.43□□□□□ -0.26
GMDS-210ENST00000533279 CTDSPL2Q05D32 466 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 MAP1SQ66K74 1059 aaPredicted RBP13.43□□□□□ -0.26
GMDS-210ENST00000533279 C16orf86Q6ZW13 317 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 ARMC9Q7Z3E5 817 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 IQCA1Q86XH1 822 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 STK11IPQ8N1F8 1099 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 CCDC17Q96LX7 622 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 CDK5RAP2Q96SN8 1893 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 GLIS2Q9BZE0 524 aaPredicted RBP13.43□□□□□ -0.26
GMDS-210ENST00000533279 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 LAMA4Q16363 1823 aa13.43□□□□□ -0.26
GMDS-210ENST00000533279 CYP2D7A0A087X1C5 515 aa13.42□□□□□ -0.26
GMDS-210ENST00000533279 MPHOSPH10O00566 681 aaKnown RBP13.42□□□□□ -0.26
GMDS-210ENST00000533279 FOXP2O15409 715 aa13.42□□□□□ -0.26
GMDS-210ENST00000533279 ORC4O43929 436 aa13.42□□□□□ -0.26
GMDS-210ENST00000533279 CYP2D6P10635 497 aa13.42□□□□□ -0.26
GMDS-210ENST00000533279 CDK8P49336 464 aa13.42□□□□□ -0.26
GMDS-210ENST00000533279 PLCD1P51178 756 aa13.42□□□□□ -0.26
GMDS-210ENST00000533279 BLOC1S2Q6QNY1 142 aa13.42□□□□□ -0.26
GMDS-210ENST00000533279 CDCA5Q96FF9 252 aa13.42□□□□□ -0.26
GMDS-210ENST00000533279 JAKMIP1Q96N16 626 aaKnown RBP13.42□□□□□ -0.26
GMDS-210ENST00000533279 NEK1Q96PY6 1258 aa13.42□□□□□ -0.26
GMDS-210ENST00000533279 UBAC1Q9BSL1 405 aa13.42□□□□□ -0.26
GMDS-210ENST00000533279 DDX60LQ5H9U9 1706 aaKnown RBP13.42□□□□□ -0.26
GMDS-210ENST00000533279 E7EWF7 191 aa13.41□□□□□ -0.26
GMDS-210ENST00000533279 SEC24BO95487 1268 aa13.41□□□□□ -0.26
GMDS-210ENST00000533279 MCM5P33992 734 aa13.41□□□□□ -0.26
GMDS-210ENST00000533279 RBM25P49756 843 aaKnown RBP13.41□□□□□ -0.26
GMDS-210ENST00000533279 TSGA10IPQ3SY00 556 aa13.41□□□□□ -0.26
GMDS-210ENST00000533279 CERKLQ49MI3 558 aaPredicted RBP13.41□□□□□ -0.26
GMDS-210ENST00000533279 TBC1D10CQ8IV04 446 aa13.41□□□□□ -0.26
GMDS-210ENST00000533279 ZFPM1Q8IX07 1006 aa13.41□□□□□ -0.26
GMDS-210ENST00000533279 RBM46Q8TBY0 533 aaKnown RBP13.41□□□□□ -0.26
GMDS-210ENST00000533279 TBC1D32Q96NH3 1257 aa13.41□□□□□ -0.26
GMDS-210ENST00000533279 ZNF408Q9H9D4 720 aa13.41□□□□□ -0.26
GMDS-210ENST00000533279 GINM1Q9NU53 330 aa13.41□□□□□ -0.26
GMDS-210ENST00000533279 SNX14Q9Y5W7 946 aa13.41□□□□□ -0.26
GMDS-210ENST00000533279 CSADQ9Y600 493 aa13.41□□□□□ -0.26
GMDS-210ENST00000533279 CYP46A1Q9Y6A2 500 aa13.41□□□□□ -0.26
GMDS-210ENST00000533279 ST18O60284 1047 aa13.4□□□□□ -0.26
GMDS-210ENST00000533279 TOMM70O94826 608 aa13.4□□□□□ -0.26
GMDS-210ENST00000533279 CASTP20810 708 aaKnown RBP13.4□□□□□ -0.26
GMDS-210ENST00000533279 FKBP1BP68106 108 aa13.4□□□□□ -0.26
GMDS-210ENST00000533279 NBPF12Q5TAG4 269 aaPredicted RBP13.4□□□□□ -0.26
GMDS-210ENST00000533279 MIGA2Q7L4E1 593 aa13.4□□□□□ -0.26
GMDS-210ENST00000533279 SH3BP5LQ7L8J4 393 aa13.4□□□□□ -0.26
GMDS-210ENST00000533279 C2orf69Q8N8R5 385 aa13.4□□□□□ -0.26
GMDS-210ENST00000533279 DYNLL2Q96FJ2 89 aa13.4□□□□□ -0.26
GMDS-210ENST00000533279 PICK1Q9NRD5 415 aa13.4□□□□□ -0.26
GMDS-210ENST00000533279 SCAF8Q9UPN6 1271 aaKnown RBP13.4□□□□□ -0.26
GMDS-210ENST00000533279 PRDM1O75626 825 aa13.39□□□□□ -0.27
GMDS-210ENST00000533279 POTEIP0CG38 1075 aa13.39□□□□□ -0.27
GMDS-210ENST00000533279 POTEJP0CG39 1038 aa13.39□□□□□ -0.27
GMDS-210ENST00000533279 FSTL1Q12841 308 aa13.39□□□□□ -0.27
GMDS-210ENST00000533279 RABEP1Q15276 862 aa13.39□□□□□ -0.27
GMDS-210ENST00000533279 ABCB5Q2M3G0 1257 aa13.39□□□□□ -0.27
GMDS-210ENST00000533279 ZNF784Q8NCA9 323 aaPredicted RBP13.39□□□□□ -0.27
GMDS-210ENST00000533279 KCNB2Q92953 911 aa13.39□□□□□ -0.27
GMDS-210ENST00000533279 TEPSINQ96N21 525 aa13.39□□□□□ -0.27
GMDS-210ENST00000533279 WRNIP1Q96S55 665 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms