RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, human

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHORDC1-208	ENST00000533062	CRHR2	Q13324	411 aa		13.9	□□□□□ -0.18
CHORDC1-208	ENST00000533062	HDAC1	Q13547	482 aa	Predicted RBP	13.9	□□□□□ -0.18
CHORDC1-208	ENST00000533062	DGKZ	Q13574	1117 aa		13.9	□□□□□ -0.18
CHORDC1-208	ENST00000533062	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.9	□□□□□ -0.18
CHORDC1-208	ENST00000533062	OTUD7B	Q6GQQ9	843 aa		13.9	□□□□□ -0.18
CHORDC1-208	ENST00000533062	LCORL	Q8N3X6	602 aa		13.9	□□□□□ -0.18
CHORDC1-208	ENST00000533062	GPATCH3	Q96I76	525 aa		13.9	□□□□□ -0.18
CHORDC1-208	ENST00000533062	DHX36	Q9H2U1	1008 aa	Known RBP	13.9	□□□□□ -0.18
CHORDC1-208	ENST00000533062	DNAJC18	Q9H819	358 aa		13.9	□□□□□ -0.18
CHORDC1-208	ENST00000533062	ARMT1	Q9H993	441 aa		13.9	□□□□□ -0.18
CHORDC1-208	ENST00000533062	PI4KB	Q9UBF8	816 aa		13.9	□□□□□ -0.18
CHORDC1-208	ENST00000533062	COL2A1	P02458	1487 aa	Predicted RBP	13.89	□□□□□ -0.19
CHORDC1-208	ENST00000533062	BTBD19	C9JJ37	291 aa		13.89	□□□□□ -0.19
CHORDC1-208	ENST00000533062	PRKAB2	O43741	272 aa		13.89	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CTNND1	O60716	968 aa	Known RBP	13.89	□□□□□ -0.19
CHORDC1-208	ENST00000533062	IGHD	P01880	384 aa		13.89	□□□□□ -0.19
CHORDC1-208	ENST00000533062	EVX2	Q03828	476 aa		13.89	□□□□□ -0.19
CHORDC1-208	ENST00000533062	B4GALNT3	Q6L9W6	998 aa		13.89	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.89	□□□□□ -0.19
CHORDC1-208	ENST00000533062	SDR42E1	Q8WUS8	393 aa		13.89	□□□□□ -0.19
CHORDC1-208	ENST00000533062	MCOLN1	Q9GZU1	580 aa		13.89	□□□□□ -0.19
CHORDC1-208	ENST00000533062	TRIM75P	A6NK02	468 aa		13.88	□□□□□ -0.19
CHORDC1-208	ENST00000533062	MBD4	O95243	580 aa		13.88	□□□□□ -0.19
CHORDC1-208	ENST00000533062	JAG1	P78504	1218 aa		13.88	□□□□□ -0.19
CHORDC1-208	ENST00000533062	MOGS	Q13724	837 aa		13.88	□□□□□ -0.19
CHORDC1-208	ENST00000533062	TAF1C	Q15572	869 aa	Predicted RBP	13.88	□□□□□ -0.19
CHORDC1-208	ENST00000533062	PI4K2B	Q8TCG2	481 aa		13.88	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CFHR5	Q9BXR6	569 aa		13.88	□□□□□ -0.19
CHORDC1-208	ENST00000533062	TRIM34	Q9BYJ4	488 aa		13.88	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.88	□□□□□ -0.19
CHORDC1-208	ENST00000533062	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
CHORDC1-208	ENST00000533062	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.88	□□□□□ -0.19
CHORDC1-208	ENST00000533062	HERC5	Q9UII4	1024 aa	Known RBP	13.88	□□□□□ -0.19
CHORDC1-208	ENST00000533062	KCNH4	Q9UQ05	1017 aa		13.88	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CDK5RAP2	Q96SN8	1893 aa		13.87	□□□□□ -0.19
CHORDC1-208	ENST00000533062	FKTN	O75072	461 aa		13.87	□□□□□ -0.19
CHORDC1-208	ENST00000533062	GDF11	O95390	407 aa		13.87	□□□□□ -0.19
CHORDC1-208	ENST00000533062	HLA-DOA	P06340	250 aa		13.87	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CAP2	P40123	477 aa		13.87	□□□□□ -0.19
CHORDC1-208	ENST00000533062	PLCD1	P51178	756 aa		13.87	□□□□□ -0.19
CHORDC1-208	ENST00000533062	TMED8	Q6PL24	325 aa	Predicted RBP	13.87	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CERS3	Q8IU89	383 aa		13.87	□□□□□ -0.19
CHORDC1-208	ENST00000533062	GCC1	Q96CN9	775 aa		13.87	□□□□□ -0.19
CHORDC1-208	ENST00000533062	ABHD8	Q96I13	439 aa		13.87	□□□□□ -0.19
CHORDC1-208	ENST00000533062	PUS7L	Q9H0K6	701 aa	Known RBP	13.87	□□□□□ -0.19
CHORDC1-208	ENST00000533062	RWDD1	Q9H446	243 aa	Predicted RBP	13.87	□□□□□ -0.19
CHORDC1-208	ENST00000533062	AFG3L2	Q9Y4W6	797 aa		13.87	□□□□□ -0.19
CHORDC1-208	ENST00000533062	SIPA1L1	O43166	1804 aa		13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CXCL11	O14625	94 aa		13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	POLR3D	P05423	398 aa	Predicted RBP	13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CYP2D6	P10635	497 aa		13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	MX1	P20591	662 aa		13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	AAMP	Q13685	434 aa		13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	UBE3C	Q15386	1083 aa		13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	GADL1	Q6ZQY3	521 aa		13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	METTL16	Q86W50	562 aa	Known RBP	13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	KBTBD3	Q8NAB2	608 aa		13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	LNPK	Q9C0E8	428 aa		13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	ZFYVE28	Q9HCC9	887 aa		13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	MCM9	Q9NXL9	1143 aa		13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	TTC41P	Q6P2S7	1318 aa		13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	LAMB1	P07942	1786 aa		13.86	□□□□□ -0.19
CHORDC1-208	ENST00000533062	FOCAD	Q5VW36	1801 aa		13.85	□□□□□ -0.19
CHORDC1-208	ENST00000533062	SMIM22	K7EJ46	135 aa		13.85	□□□□□ -0.19
CHORDC1-208	ENST00000533062	PDHX	O00330	501 aa		13.85	□□□□□ -0.19
CHORDC1-208	ENST00000533062	ERC2	O15083	957 aa		13.85	□□□□□ -0.19
CHORDC1-208	ENST00000533062	GLRX3	O76003	335 aa	Known RBP	13.85	□□□□□ -0.19
CHORDC1-208	ENST00000533062	ECM2	O94769	699 aa	Predicted RBP	13.85	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CAP1	Q01518	475 aa		13.85	□□□□□ -0.19
CHORDC1-208	ENST00000533062	SPP2	Q13103	211 aa		13.85	□□□□□ -0.19
CHORDC1-208	ENST00000533062	ZSCAN25	Q6NSZ9	544 aa		13.85	□□□□□ -0.19
CHORDC1-208	ENST00000533062	GPAT2	Q6NUI2	795 aa		13.85	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CTU1	Q7Z7A3	348 aa	Known RBP	13.85	□□□□□ -0.19
CHORDC1-208	ENST00000533062	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.85	□□□□□ -0.19
CHORDC1-208	ENST00000533062	SALL3	Q9BXA9	1300 aa		13.85	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CYP2D7	A0A087X1C5	515 aa		13.84	□□□□□ -0.19
CHORDC1-208	ENST00000533062		A0A0G2JLL6	359 aa	Predicted RBP	13.84	□□□□□ -0.19
CHORDC1-208	ENST00000533062	NOM1	Q5C9Z4	860 aa	Known RBP	13.84	□□□□□ -0.19
CHORDC1-208	ENST00000533062	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.84	□□□□□ -0.19
CHORDC1-208	ENST00000533062	ANKRD23	Q86SG2	305 aa		13.84	□□□□□ -0.19
CHORDC1-208	ENST00000533062	TTC6	Q86TZ1	520 aa		13.84	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CD99L2	Q8TCZ2	262 aa		13.84	□□□□□ -0.19
CHORDC1-208	ENST00000533062	OSBP2	Q969R2	916 aa		13.84	□□□□□ -0.19
CHORDC1-208	ENST00000533062	SERPINB13	Q9UIV8	391 aa		13.84	□□□□□ -0.19
CHORDC1-208	ENST00000533062	CENPF	P49454	3210 aa		13.83	□□□□□ -0.19
CHORDC1-208	ENST00000533062	DOCK1	Q14185	1865 aa		13.83	□□□□□ -0.2
CHORDC1-208	ENST00000533062	CCDC85C	A6NKD9	419 aa		13.83	□□□□□ -0.2
CHORDC1-208	ENST00000533062	USP17L5	A8MUK1	530 aa		13.83	□□□□□ -0.2
CHORDC1-208	ENST00000533062	RNF113A	O15541	343 aa	Known RBP	13.83	□□□□□ -0.2
CHORDC1-208	ENST00000533062	GH2	P01242	217 aa		13.83	□□□□□ -0.2
CHORDC1-208	ENST00000533062	CYP2C8	P10632	490 aa		13.83	□□□□□ -0.2
CHORDC1-208	ENST00000533062	PDE1A	P54750	535 aa		13.83	□□□□□ -0.2
CHORDC1-208	ENST00000533062	SP3	Q02447	781 aa		13.83	□□□□□ -0.2
CHORDC1-208	ENST00000533062	SMC5	Q8IY18	1101 aa		13.83	□□□□□ -0.2
CHORDC1-208	ENST00000533062	ZNF280C	Q8ND82	737 aa		13.83	□□□□□ -0.2
CHORDC1-208	ENST00000533062	DYNLL2	Q96FJ2	89 aa		13.83	□□□□□ -0.2
CHORDC1-208	ENST00000533062	CPA4	Q9UI42	421 aa		13.83	□□□□□ -0.2
CHORDC1-208	ENST00000533062	SLC4A4	Q9Y6R1	1079 aa		13.83	□□□□□ -0.2
CHORDC1-208	ENST00000533062	HTT	P42858	3142 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms