RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 HMMRO75330 724 aa12.5□□□□□ -0.41
CHMP4A-206ENST00000533011 SYN1P17600 705 aa12.5□□□□□ -0.41
CHMP4A-206ENST00000533011 FASTKD5Q7L8L6 764 aaKnown RBP12.5□□□□□ -0.41
CHMP4A-206ENST00000533011 ZGPATQ8N5A5 531 aaKnown RBP12.5□□□□□ -0.41
CHMP4A-206ENST00000533011 MAFAQ8NHW3 353 aaPredicted RBP12.5□□□□□ -0.41
CHMP4A-206ENST00000533011 COA7Q96BR5 231 aa12.5□□□□□ -0.41
CHMP4A-206ENST00000533011 ZNF341Q9BYN7 854 aa12.5□□□□□ -0.41
CHMP4A-206ENST00000533011 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHMP4A-206ENST00000533011 TMOD2Q9NZR1 351 aa12.5□□□□□ -0.41
CHMP4A-206ENST00000533011 SLC45A1Q9Y2W3 748 aa12.5□□□□□ -0.41
CHMP4A-206ENST00000533011 PDS5AQ29RF7 1337 aaKnown RBP12.5□□□□□ -0.41
CHMP4A-206ENST00000533011 SALL1Q9NSC2 1324 aa12.5□□□□□ -0.41
CHMP4A-206ENST00000533011 ZSWIM8A7E2V4 1837 aa12.5□□□□□ -0.41
CHMP4A-206ENST00000533011 AOX1Q06278 1338 aa12.49□□□□□ -0.41
CHMP4A-206ENST00000533011 ELNP15502 786 aa12.49□□□□□ -0.41
CHMP4A-206ENST00000533011 RASGRF1Q13972 1273 aa12.49□□□□□ -0.41
CHMP4A-206ENST00000533011 HSP90AB4PQ58FF6 505 aa12.49□□□□□ -0.41
CHMP4A-206ENST00000533011 TNNI3KQ59H18 835 aa12.49□□□□□ -0.41
CHMP4A-206ENST00000533011 HHIPL2Q6UWX4 724 aa12.49□□□□□ -0.41
CHMP4A-206ENST00000533011 ERC1Q8IUD2 1116 aa12.49□□□□□ -0.41
CHMP4A-206ENST00000533011 ZDHHC15Q96MV8 337 aa12.49□□□□□ -0.41
CHMP4A-206ENST00000533011 HMX1Q9NP08 348 aaPredicted RBP12.49□□□□□ -0.41
CHMP4A-206ENST00000533011 FPGT-TNNI3KV9GXZ4 949 aa12.49□□□□□ -0.41
CHMP4A-206ENST00000533011 LDHBP07195 334 aaKnown RBP12.48□□□□□ -0.41
CHMP4A-206ENST00000533011 PRDX5P30044 214 aa12.48□□□□□ -0.41
CHMP4A-206ENST00000533011 CDAN1Q8IWY9 1227 aa12.48□□□□□ -0.41
CHMP4A-206ENST00000533011 DIS3LQ8TF46 1054 aaKnown RBP12.48□□□□□ -0.41
CHMP4A-206ENST00000533011 CDX2Q99626 313 aaPredicted RBP12.48□□□□□ -0.41
CHMP4A-206ENST00000533011 EXOC6BQ9Y2D4 811 aa12.48□□□□□ -0.41
CHMP4A-206ENST00000533011 HMGCRP04035 888 aa12.47□□□□□ -0.41
CHMP4A-206ENST00000533011 UQCRFS1P1P0C7P4 283 aa12.47□□□□□ -0.41
CHMP4A-206ENST00000533011 ARID4AP29374 1257 aaPredicted RBP12.47□□□□□ -0.41
CHMP4A-206ENST00000533011 MOGSQ13724 837 aa12.47□□□□□ -0.41
CHMP4A-206ENST00000533011 TJAP1Q5JTD0 557 aa12.47□□□□□ -0.41
CHMP4A-206ENST00000533011 CCDC158Q5M9N0 1113 aa12.47□□□□□ -0.41
CHMP4A-206ENST00000533011 SPTY2D1Q68D10 685 aaPredicted RBP12.47□□□□□ -0.41
CHMP4A-206ENST00000533011 SIRT2Q8IXJ6 389 aa12.47□□□□□ -0.41
CHMP4A-206ENST00000533011 SPATA5Q8NB90 893 aa12.47□□□□□ -0.41
CHMP4A-206ENST00000533011 LBHD1Q9BQE6 289 aaPredicted RBP12.47□□□□□ -0.41
CHMP4A-206ENST00000533011 HMG20BQ9P0W2 317 aa12.47□□□□□ -0.41
CHMP4A-206ENST00000533011 ZNF112Q9UJU3 913 aa12.47□□□□□ -0.41
CHMP4A-206ENST00000533011 OGDHLQ9ULD0 1010 aa12.47□□□□□ -0.41
CHMP4A-206ENST00000533011 HOXD11P31277 338 aaPredicted RBP12.46□□□□□ -0.41
CHMP4A-206ENST00000533011 RRP1P56182 461 aaKnown RBP12.46□□□□□ -0.41
CHMP4A-206ENST00000533011 TTC39AQ5SRH9 613 aa12.46□□□□□ -0.41
CHMP4A-206ENST00000533011 NOL9Q5SY16 702 aaKnown RBP12.46□□□□□ -0.41
CHMP4A-206ENST00000533011 APOBEC3HQ6NTF7 200 aaKnown RBP12.46□□□□□ -0.41
CHMP4A-206ENST00000533011 EAF2Q96CJ1 260 aaPredicted RBP12.46□□□□□ -0.41
CHMP4A-206ENST00000533011 DBNDD2Q9BQY9 259 aa12.46□□□□□ -0.41
CHMP4A-206ENST00000533011 ABCF2Q9UG63 623 aa12.46□□□□□ -0.41
CHMP4A-206ENST00000533011 ARIH1Q9Y4X5 557 aaPredicted RBP12.46□□□□□ -0.41
CHMP4A-206ENST00000533011 COL2A1P02458 1487 aaPredicted RBP12.46□□□□□ -0.42
CHMP4A-206ENST00000533011 RPAP1Q9BWH6 1393 aaPredicted RBP12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 ALPK3Q96L96 1907 aa12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 CYP2C8P10632 490 aa12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 MCAMP43121 646 aa12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 DIXDC1Q155Q3 683 aa12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 GPAT2Q6NUI2 795 aa12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 SLF2Q8IX21 1173 aa12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 RHPN1Q8TCX5 695 aa12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 ZNF512BQ96KM6 892 aaPredicted RBP12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 FAM161BQ96MY7 647 aa12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 CCDC8Q9H0W5 538 aaPredicted RBP12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 SEMA6BQ9H3T3 888 aa12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 DBNLQ9UJU6 430 aaKnown RBP12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 DAGLAQ9Y4D2 1042 aa12.45□□□□□ -0.42
CHMP4A-206ENST00000533011 RAB11FIP3O75154 756 aa12.44□□□□□ -0.42
CHMP4A-206ENST00000533011 PI16Q6UXB8 463 aa12.44□□□□□ -0.42
CHMP4A-206ENST00000533011 ERICH6Q7L0X2 663 aa12.44□□□□□ -0.42
CHMP4A-206ENST00000533011 DZIP1Q86YF9 867 aaKnown RBP12.44□□□□□ -0.42
CHMP4A-206ENST00000533011 SMCR8Q8TEV9 937 aaPredicted RBP12.44□□□□□ -0.42
CHMP4A-206ENST00000533011 KIF1BPQ96EK5 621 aa12.44□□□□□ -0.42
CHMP4A-206ENST00000533011 MGAMO43451 1857 aa12.44□□□□□ -0.42
CHMP4A-206ENST00000533011 INPP5BP32019 993 aa12.43□□□□□ -0.42
CHMP4A-206ENST00000533011 CACNB3P54284 484 aa12.43□□□□□ -0.42
CHMP4A-206ENST00000533011 TBC1D9Q6ZT07 1266 aa12.43□□□□□ -0.42
CHMP4A-206ENST00000533011 AACSQ86V21 672 aa12.43□□□□□ -0.42
CHMP4A-206ENST00000533011 CLASRPQ8N2M8 674 aaKnown RBP12.43□□□□□ -0.42
CHMP4A-206ENST00000533011 FAM151AQ8WW52 585 aa12.43□□□□□ -0.42
CHMP4A-206ENST00000533011 FAM163AQ96GL9 167 aaPredicted RBP12.43□□□□□ -0.42
CHMP4A-206ENST00000533011 IL1RAPL2Q9NP60 686 aa12.43□□□□□ -0.42
CHMP4A-206ENST00000533011 TLR7Q9NYK1 1049 aaKnown RBP12.43□□□□□ -0.42
CHMP4A-206ENST00000533011 TAOK2Q9UL54 1235 aa12.43□□□□□ -0.42
CHMP4A-206ENST00000533011 MUC3AQ02505 3323 aa12.43□□□□□ -0.42
CHMP4A-206ENST00000533011 MYH2Q9UKX2 1941 aa12.43□□□□□ -0.42
CHMP4A-206ENST00000533011 GAKO14976 1311 aa12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 TMEM265A0A087WTH1 108 aa12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 A0A0G2JLL6 359 aaPredicted RBP12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 APBB1O00213 710 aa12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 LDHCP07864 332 aa12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 COL6A1P12109 1028 aa12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 GSTO1P78417 241 aa12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 MDM2Q00987 491 aaPredicted RBP12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 MECOMQ03112 1051 aa12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 CDC42EP5Q6NZY7 148 aa12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 MIGA2Q7L4E1 593 aa12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 PRRT2Q7Z6L0 340 aaPredicted RBP12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 TRMT44Q8IYL2 757 aaKnown RBP12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 SNRKQ9NRH2 765 aa12.42□□□□□ -0.42
CHMP4A-206ENST00000533011 USP40Q9NVE5 1235 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms