RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 MORF4L1Q9UBU8 362 aa2.4□□□□□ -2.03
KNL1-211ENST00000533001 RYR3Q15413 4870 aa2.4□□□□□ -2.03
KNL1-211ENST00000533001 CCT4P50991 539 aaKnown RBP2.4□□□□□ -2.03
KNL1-211ENST00000533001 TMEM63BQ5T3F8 832 aa2.4□□□□□ -2.03
KNL1-211ENST00000533001 RBPJLQ9UBG7 517 aa2.4□□□□□ -2.03
KNL1-211ENST00000533001 A0A0G2JLL6 359 aaPredicted RBP2.39□□□□□ -2.03
KNL1-211ENST00000533001 ECE1P42892 770 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 CAMK1Q14012 370 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 MORN1Q5T089 497 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 SH3RF1Q7Z6J0 888 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 PRRT2Q7Z6L0 340 aaPredicted RBP2.39□□□□□ -2.03
KNL1-211ENST00000533001 KIAA1549LQ6ZVL6 1849 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 TRIM43BA6NCK2 446 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 RASA3Q14644 834 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 SLC43A3Q8NBI5 491 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 GAS2L2Q8NHY3 880 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 TRIM43Q96BQ3 446 aaPredicted RBP2.39□□□□□ -2.03
KNL1-211ENST00000533001 PHOX2BQ99453 314 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 METTL22Q9BUU2 404 aaPredicted RBP2.39□□□□□ -2.03
KNL1-211ENST00000533001 UNC93B1Q9H1C4 597 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 FZD8Q9H461 694 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 RC3H2Q9HBD1 1191 aaKnown RBP2.39□□□□□ -2.03
KNL1-211ENST00000533001 HOXC8P31273 242 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 MTX1Q13505 466 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 LRRC26Q2I0M4 334 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 LBX2Q6XYB7 198 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 LARGE2Q8N3Y3 721 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 MPNDQ8N594 471 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 STAP2Q9UGK3 403 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 RP1L1Q8IWN7 2480 aaPredicted RBP2.39□□□□□ -2.03
KNL1-211ENST00000533001 SGPL1O95470 568 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 USP17L8P0C7I0 530 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 CDK7P50613 346 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 HIC1Q14526 733 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 ANKRD13DQ6ZTN6 518 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 CCDC84Q86UT8 332 aaPredicted RBP2.39□□□□□ -2.03
KNL1-211ENST00000533001 FAM83AQ86UY5 434 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 TBX21Q9UL17 535 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 COL6A5A8TX70 2615 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 PLXNB3Q9ULL4 1909 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 LAMA4Q16363 1823 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 SALL1Q9NSC2 1324 aa2.39□□□□□ -2.03
KNL1-211ENST00000533001 PPM1GO15355 546 aaPredicted RBP2.38□□□□□ -2.03
KNL1-211ENST00000533001 KCNC3Q14003 757 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 TRIP11Q15643 1979 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 ADAMTS4O75173 837 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 CTSWP56202 376 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 PRKCZQ05513 592 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 WASHC4Q2M389 1173 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 CCDC191Q8NCU4 936 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 PXYLP1Q8TE99 480 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 U2AF1L4Q8WU68 220 aaKnown RBP2.38□□□□□ -2.03
KNL1-211ENST00000533001 TRRAPQ9Y4A5 3859 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 MTCL1Q9Y4B5 1905 aaKnown RBP2.38□□□□□ -2.03
KNL1-211ENST00000533001 TNRC6BQ9UPQ9 1833 aaKnown RBP2.38□□□□□ -2.03
KNL1-211ENST00000533001 VWA8A3KMH1 1905 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 DNAJC25-GNG10A0A024R161 153 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 A0A087WZG4 1122 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 C19orf67A6NJJ6 358 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 FRAT2O75474 233 aaPredicted RBP2.38□□□□□ -2.03
KNL1-211ENST00000533001 PRDX5P30044 214 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 MAGEA10P43363 369 aaPredicted RBP2.38□□□□□ -2.03
KNL1-211ENST00000533001 CACNB3P54284 484 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 EAPPQ56P03 285 aaPredicted RBP2.38□□□□□ -2.03
KNL1-211ENST00000533001 ZKSCAN4Q969J2 545 aaPredicted RBP2.38□□□□□ -2.03
KNL1-211ENST00000533001 CSMD3Q7Z407 3707 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 PI4KAP42356 2102 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 LRRC24Q50LG9 513 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 TREML2Q5T2D2 321 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 PORCNQ9H237 461 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 CXXC1Q9P0U4 656 aaPredicted RBP2.38□□□□□ -2.03
KNL1-211ENST00000533001 SERPINA10Q9UK55 444 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 TNNQ9UQP3 1299 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 ARIH1Q9Y4X5 557 aaPredicted RBP2.38□□□□□ -2.03
KNL1-211ENST00000533001 DENND4CQ5VZ89 1909 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 CAPNS1P04632 268 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 PTPRAP18433 802 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 EIF4G2P78344 907 aaKnown RBP eCLIP2.38□□□□□ -2.03
KNL1-211ENST00000533001 POTEGQ6S5H5 508 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 P2RX7Q99572 595 aaKnown RBP2.38□□□□□ -2.03
KNL1-211ENST00000533001 PRKRIP1Q9H875 184 aaPredicted RBP2.38□□□□□ -2.03
KNL1-211ENST00000533001 SALL3Q9BXA9 1300 aa2.38□□□□□ -2.03
KNL1-211ENST00000533001 PI4KAP2A4QPH2 592 aa2.37□□□□□ -2.03
KNL1-211ENST00000533001 SLC35G1Q2M3R5 365 aa2.37□□□□□ -2.03
KNL1-211ENST00000533001 DPP8Q6V1X1 898 aaPredicted RBP2.37□□□□□ -2.03
KNL1-211ENST00000533001 TMC4Q7Z404 712 aa2.37□□□□□ -2.03
KNL1-211ENST00000533001 SIRT2Q8IXJ6 389 aa2.37□□□□□ -2.03
KNL1-211ENST00000533001 PI4KAP1Q8N8J0 262 aa2.37□□□□□ -2.03
KNL1-211ENST00000533001 KLHDC4Q8TBB5 520 aa2.37□□□□□ -2.03
KNL1-211ENST00000533001 PAPLNO95428 1278 aa2.37□□□□□ -2.03
KNL1-211ENST00000533001 LTBRP36941 435 aa2.37□□□□□ -2.03
KNL1-211ENST00000533001 ZNF157P51786 506 aaPredicted RBP2.37□□□□□ -2.03
KNL1-211ENST00000533001 HDLBPQ00341 1268 aaKnown RBP2.37□□□□□ -2.03
KNL1-211ENST00000533001 TATDN1Q6P1N9 297 aa2.37□□□□□ -2.03
KNL1-211ENST00000533001 MORC1Q86VD1 984 aa2.37□□□□□ -2.03
KNL1-211ENST00000533001 ZNF594Q96JF6 807 aaPredicted RBP2.37□□□□□ -2.03
KNL1-211ENST00000533001 NLRP3Q96P20 1036 aa2.37□□□□□ -2.03
KNL1-211ENST00000533001 NSFL1CQ9UNZ2 370 aaKnown RBP2.37□□□□□ -2.03
KNL1-211ENST00000533001 IRS4O14654 1257 aaPredicted RBP2.37□□□□□ -2.03
KNL1-211ENST00000533001 XRCC5P13010 732 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms