RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 PABPC4Q13310 644 aaKnown RBP eCLIP24.42■■□□□ 1.5
PTP4A2-214ENST00000532289 LRRC24Q50LG9 513 aa24.42■■□□□ 1.5
PTP4A2-214ENST00000532289 METTL24Q5JXM2 366 aa24.42■■□□□ 1.5
PTP4A2-214ENST00000532289 SOCS4Q8WXH5 440 aa24.42■■□□□ 1.5
PTP4A2-214ENST00000532289 IDI2Q9BXS1 227 aa24.42■■□□□ 1.5
PTP4A2-214ENST00000532289 USP6NLQ92738 828 aa24.4■■□□□ 1.5
PTP4A2-214ENST00000532289 KAZALD1Q96I82 304 aa24.4■■□□□ 1.5
PTP4A2-214ENST00000532289 RFX7Q2KHR2 1363 aa24.4■■□□□ 1.5
PTP4A2-214ENST00000532289 DDTLA6NHG4 134 aaPredicted RBP24.39■■□□□ 1.49
PTP4A2-214ENST00000532289 PRDX5P30044 214 aa24.39■■□□□ 1.49
PTP4A2-214ENST00000532289 ATN1P54259 1190 aaPredicted RBP24.39■■□□□ 1.49
PTP4A2-214ENST00000532289 SPP2Q13103 211 aa24.39■■□□□ 1.49
PTP4A2-214ENST00000532289 ZSCAN29Q8IWY8 852 aaPredicted RBP24.39■■□□□ 1.49
PTP4A2-214ENST00000532289 C9orf78Q9NZ63 289 aaPredicted RBP24.39■■□□□ 1.49
PTP4A2-214ENST00000532289 RLFQ13129 1914 aa24.39■■□□□ 1.49
PTP4A2-214ENST00000532289 MYH2Q9UKX2 1941 aa24.38■■□□□ 1.49
PTP4A2-214ENST00000532289 ZEB1P37275 1124 aaPredicted RBP24.38■■□□□ 1.49
PTP4A2-214ENST00000532289 RTP1P59025 263 aa24.38■■□□□ 1.49
PTP4A2-214ENST00000532289 CCL14Q16627 93 aa24.38■■□□□ 1.49
PTP4A2-214ENST00000532289 ATAD5Q96QE3 1844 aa24.38■■□□□ 1.49
PTP4A2-214ENST00000532289 FGFR2P21802 821 aa24.37■■□□□ 1.49
PTP4A2-214ENST00000532289 HMGCS2P54868 508 aa24.37■■□□□ 1.49
PTP4A2-214ENST00000532289 ZNF280CQ8ND82 737 aa24.37■■□□□ 1.49
PTP4A2-214ENST00000532289 SUCLG2Q96I99 432 aa24.37■■□□□ 1.49
PTP4A2-214ENST00000532289 PEX10O60683 326 aa24.35■■□□□ 1.49
PTP4A2-214ENST00000532289 LDHBP07195 334 aaKnown RBP24.35■■□□□ 1.49
PTP4A2-214ENST00000532289 IFIT1P09914 478 aaKnown RBP24.35■■□□□ 1.49
PTP4A2-214ENST00000532289 PDE3AQ14432 1141 aa24.35■■□□□ 1.49
PTP4A2-214ENST00000532289 GRIN2CQ14957 1233 aa24.35■■□□□ 1.49
PTP4A2-214ENST00000532289 SH3D19Q5HYK7 790 aa24.35■■□□□ 1.49
PTP4A2-214ENST00000532289 ATXN2LQ8WWM7 1075 aaKnown RBP24.35■■□□□ 1.49
PTP4A2-214ENST00000532289 BADQ92934 168 aa24.35■■□□□ 1.49
PTP4A2-214ENST00000532289 TBC1D12O60347 775 aa24.34■■□□□ 1.49
PTP4A2-214ENST00000532289 RGS2P41220 211 aa24.34■■□□□ 1.49
PTP4A2-214ENST00000532289 PUM3Q15397 648 aaKnown RBP24.34■■□□□ 1.49
PTP4A2-214ENST00000532289 MORN1Q5T089 497 aa24.34■■□□□ 1.49
PTP4A2-214ENST00000532289 GPRC5AQ8NFJ5 357 aa24.34■■□□□ 1.49
PTP4A2-214ENST00000532289 TBC1D2Q9BYX2 928 aa24.34■■□□□ 1.49
PTP4A2-214ENST00000532289 TXNRD2Q9NNW7 524 aa24.34■■□□□ 1.49
PTP4A2-214ENST00000532289 ATP11BQ9Y2G3 1177 aa24.34■■□□□ 1.49
PTP4A2-214ENST00000532289 DNM1LO00429 736 aa24.33■■□□□ 1.49
PTP4A2-214ENST00000532289 MAPK4P31152 587 aa24.33■■□□□ 1.49
PTP4A2-214ENST00000532289 ADAMTS19Q8TE59 1207 aa24.33■■□□□ 1.49
PTP4A2-214ENST00000532289 APBA2Q99767 749 aa24.33■■□□□ 1.49
PTP4A2-214ENST00000532289 DDX4Q9NQI0 724 aaKnown RBP24.33■■□□□ 1.49
PTP4A2-214ENST00000532289 SYNGAP1Q96PV0 1343 aa24.33■■□□□ 1.48
PTP4A2-214ENST00000532289 ALDH1L1O75891 902 aa24.32■■□□□ 1.48
PTP4A2-214ENST00000532289 LPAR1Q92633 364 aa24.32■■□□□ 1.48
PTP4A2-214ENST00000532289 ASB2Q96Q27 587 aa24.32■■□□□ 1.48
PTP4A2-214ENST00000532289 P2RX7Q99572 595 aaKnown RBP24.32■■□□□ 1.48
PTP4A2-214ENST00000532289 OSBPL5Q9H0X9 879 aaPredicted RBP24.32■■□□□ 1.48
PTP4A2-214ENST00000532289 DDX10Q13206 875 aaKnown RBP24.31■■□□□ 1.48
PTP4A2-214ENST00000532289 RABL6Q3YEC7 729 aaPredicted RBP24.31■■□□□ 1.48
PTP4A2-214ENST00000532289 DDX20Q9UHI6 824 aaKnown RBP24.31■■□□□ 1.48
PTP4A2-214ENST00000532289 GAKO14976 1311 aa24.31■■□□□ 1.48
PTP4A2-214ENST00000532289 SALL1Q9NSC2 1324 aa24.31■■□□□ 1.48
PTP4A2-214ENST00000532289 HOXA7P31268 230 aaPredicted RBP24.3■■□□□ 1.48
PTP4A2-214ENST00000532289 IRX3P78415 501 aaPredicted RBP24.3■■□□□ 1.48
PTP4A2-214ENST00000532289 GPR142Q7Z601 462 aa24.3■■□□□ 1.48
PTP4A2-214ENST00000532289 BICC1Q9H694 974 aaKnown RBP24.3■■□□□ 1.48
PTP4A2-214ENST00000532289 PRDM5Q9NQX1 630 aaPredicted RBP24.3■■□□□ 1.48
PTP4A2-214ENST00000532289 RBPJLQ9UBG7 517 aa24.3■■□□□ 1.48
PTP4A2-214ENST00000532289 ARIH1Q9Y4X5 557 aaPredicted RBP24.3■■□□□ 1.48
PTP4A2-214ENST00000532289 FAM196BA6NMK8 535 aa24.29■■□□□ 1.48
PTP4A2-214ENST00000532289 MSCO60682 206 aa24.29■■□□□ 1.48
PTP4A2-214ENST00000532289 VAMP4O75379 141 aa24.29■■□□□ 1.48
PTP4A2-214ENST00000532289 NBPF7P0C2Y1 421 aaPredicted RBP24.29■■□□□ 1.48
PTP4A2-214ENST00000532289 HERVK_113P62684 666 aa24.29■■□□□ 1.48
PTP4A2-214ENST00000532289 Q3C1V9 767 aa24.29■■□□□ 1.48
PTP4A2-214ENST00000532289 SLC39A5Q6ZMH5 540 aa24.29■■□□□ 1.48
PTP4A2-214ENST00000532289 UHRF1Q96T88 793 aaPredicted RBP24.29■■□□□ 1.48
PTP4A2-214ENST00000532289 PORCNQ9H237 461 aa24.29■■□□□ 1.48
PTP4A2-214ENST00000532289 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.29■■□□□ 1.48
PTP4A2-214ENST00000532289 PICALMQ13492 652 aa24.28■■□□□ 1.48
PTP4A2-214ENST00000532289 PLEKHH3Q7Z736 793 aa24.28■■□□□ 1.48
PTP4A2-214ENST00000532289 KLHDC4Q8TBB5 520 aa24.28■■□□□ 1.48
PTP4A2-214ENST00000532289 USP17L5A8MUK1 530 aa24.27■■□□□ 1.48
PTP4A2-214ENST00000532289 SLC5A1P13866 664 aa24.27■■□□□ 1.48
PTP4A2-214ENST00000532289 ERVK-9P63128 1117 aa24.27■■□□□ 1.48
PTP4A2-214ENST00000532289 ERVK-24P63145 666 aa24.27■■□□□ 1.48
PTP4A2-214ENST00000532289 ANKRD44Q8N8A2 993 aa24.27■■□□□ 1.48
PTP4A2-214ENST00000532289 LPIN2Q92539 896 aa24.27■■□□□ 1.48
PTP4A2-214ENST00000532289 RNPC3Q96LT9 517 aaKnown RBP24.27■■□□□ 1.48
PTP4A2-214ENST00000532289 PDLIM7Q9NR12 457 aa24.27■■□□□ 1.48
PTP4A2-214ENST00000532289 FLRT1Q9NZU1 646 aa24.27■■□□□ 1.48
PTP4A2-214ENST00000532289 THEGQ9P2T0 379 aa24.27■■□□□ 1.48
PTP4A2-214ENST00000532289 UTYO14607 1347 aa24.27■■□□□ 1.48
PTP4A2-214ENST00000532289 TRIM43BA6NCK2 446 aa24.26■■□□□ 1.47
PTP4A2-214ENST00000532289 CAP2P40123 477 aa24.26■■□□□ 1.47
PTP4A2-214ENST00000532289 MAP2K5Q13163 448 aa24.26■■□□□ 1.47
PTP4A2-214ENST00000532289 SNX17Q15036 470 aa24.26■■□□□ 1.47
PTP4A2-214ENST00000532289 MFSD14CQ5VZR4 134 aa24.26■■□□□ 1.47
PTP4A2-214ENST00000532289 SH3RF1Q7Z6J0 888 aa24.26■■□□□ 1.47
PTP4A2-214ENST00000532289 TRIM43Q96BQ3 446 aaPredicted RBP24.26■■□□□ 1.47
PTP4A2-214ENST00000532289 C1QTNF1Q9BXJ1 281 aa24.26■■□□□ 1.47
PTP4A2-214ENST00000532289 SRCIN1Q9C0H9 1055 aa24.26■■□□□ 1.47
PTP4A2-214ENST00000532289 DNAJB2P25686 324 aa24.25■■□□□ 1.47
PTP4A2-214ENST00000532289 RRP1BQ14684 758 aaKnown RBP24.25■■□□□ 1.47
PTP4A2-214ENST00000532289 TRIM60Q495X7 471 aa24.25■■□□□ 1.47
PTP4A2-214ENST00000532289 CCAR1Q8IX12 1150 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms