RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 DHX58Q96C10 678 aa9.07□□□□□ -0.96
CTNND1-230ENST00000532245 ATP10DQ9P241 1426 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 TMEM232C9JQI7 657 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 E7EWF7 191 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 DTNBO60941 627 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 PHACTR2O75167 634 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 DEXIO95424 95 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 FAM177A1Q8N128 213 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-230ENST00000532245 SPC25Q9HBM1 224 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 GRIN3BO60391 1043 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 MRE11P49959 708 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 GPSM2P81274 684 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 RC3H1Q5TC82 1133 aaKnown RBP9.06□□□□□ -0.96
CTNND1-230ENST00000532245 CCDC181Q5TID7 509 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 DTHD1Q6ZMT9 781 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 CMTR1Q8N1G2 835 aaKnown RBP9.06□□□□□ -0.96
CTNND1-230ENST00000532245 SNX14Q9Y5W7 946 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 NCOA3Q9Y6Q9 1424 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 RRAGBQ5VZM2 374 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 TNPO1Q92973 898 aaKnown RBP9.06□□□□□ -0.96
CTNND1-230ENST00000532245 ZSCAN10Q96SZ4 725 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-230ENST00000532245 DSCC1Q9BVC3 393 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 AZI2Q9H6S1 392 aa9.06□□□□□ -0.96
CTNND1-230ENST00000532245 EPHA10Q5JZY3 1008 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 SLFN13Q68D06 897 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 PRR5LQ6MZQ0 368 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 DPP9Q86TI2 863 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 DHX37Q8IY37 1157 aaKnown RBP9.05□□□□□ -0.96
CTNND1-230ENST00000532245 TESPA1A2RU30 521 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-230ENST00000532245 HARSP12081 509 aaKnown RBP9.05□□□□□ -0.96
CTNND1-230ENST00000532245 CPS1P31327 1500 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 MECOMQ03112 1051 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 RASGRF1Q13972 1273 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 KANK3Q6NY19 840 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 KCNG4Q8TDN1 519 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 FRMPD1Q5SYB0 1578 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 HSPD1P10809 573 aaKnown RBP9.05□□□□□ -0.96
CTNND1-230ENST00000532245 OSBPP22059 807 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 ARHGEF16Q5VV41 709 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 DPEP1P16444 411 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 UBE3CQ15386 1083 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 CCDC183Q5T5S1 534 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 TRIM47Q96LD4 638 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 TDRD3Q9H7E2 651 aaKnown RBP9.05□□□□□ -0.96
CTNND1-230ENST00000532245 GPR108Q9NPR9 543 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 CNPY2Q9Y2B0 182 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 DCCP43146 1447 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 VWA3AA6NCI4 1184 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 PRKAB2O43741 272 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 FGAP02671 866 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 TXKP42681 527 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 ARHGEF6Q15052 776 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 MAEAQ7L5Y9 396 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 CPLX3Q8WVH0 158 aa9.05□□□□□ -0.96
CTNND1-230ENST00000532245 ARID4AP29374 1257 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-230ENST00000532245 CRKP46108 304 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 NCAPH2Q6IBW4 605 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 PNMA1Q8ND90 353 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 NAP1L4Q99733 375 aaKnown RBP9.04□□□□□ -0.96
CTNND1-230ENST00000532245 CD209Q9NNX6 404 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 ATP8A2Q9NTI2 1148 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 CCT6AP40227 531 aaKnown RBP9.04□□□□□ -0.96
CTNND1-230ENST00000532245 KRT26Q7Z3Y9 468 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 PODNQ7Z5L7 613 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 SPTLC2O15270 562 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 CTAGE5O15320 804 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 DNM1Q05193 864 aaKnown RBP9.04□□□□□ -0.96
CTNND1-230ENST00000532245 FERMT2Q96AC1 680 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 LZTS2Q9BRK4 669 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 SERPINB13Q9UIV8 391 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 NRXN1Q9ULB1 1477 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 KCTD2Q14681 263 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 TDRD12Q587J7 1177 aaKnown RBP9.04□□□□□ -0.96
CTNND1-230ENST00000532245 DPH6Q7L8W6 267 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 KIAA1328Q86T90 577 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 LCORLQ8N3X6 602 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 GLG1Q92896 1179 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 MLXIPQ9HAP2 919 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 DDX19AQ9NUU7 478 aaKnown RBP9.04□□□□□ -0.96
CTNND1-230ENST00000532245 CCPG1Q9ULG6 757 aa9.04□□□□□ -0.96
CTNND1-230ENST00000532245 TNKSO95271 1327 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 CCNA1P78396 465 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 SP8Q8IXZ3 490 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 ZNF654Q8IZM8 581 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.03□□□□□ -0.967e-6■□□□□ 8.3
CTNND1-230ENST00000532245 GLT8D2Q9H1C3 349 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 IQCA1LA6NCM1 817 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 EPB41L2O43491 1005 aaKnown RBP9.03□□□□□ -0.96
CTNND1-230ENST00000532245 GRIPAP1Q4V328 841 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 TXLNBQ8N3L3 684 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 PI4KBQ9UBF8 816 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 MED14O60244 1454 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 CCDC169A6NNP5 214 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 KRT13P13646 458 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 PTH1RQ03431 593 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 C8orf34Q49A92 452 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 COL23A1Q86Y22 540 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-230ENST00000532245 DYNLL2Q96FJ2 89 aa9.03□□□□□ -0.96
CTNND1-230ENST00000532245 GPBP1L1Q9HC44 474 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-230ENST00000532245 RMND1Q9NWS8 449 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms