RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 GNL3LQ9NVN8 582 aaKnown RBP19.41■□□□□ 0.7
VPS26B-206ENST00000531741 KCNH3Q9ULD8 1083 aa19.41■□□□□ 0.7
VPS26B-206ENST00000531741 UBE4AQ14139 1066 aa19.4■□□□□ 0.7
VPS26B-206ENST00000531741 CEP135Q66GS9 1140 aa19.4■□□□□ 0.7
VPS26B-206ENST00000531741 DIS3L2Q8IYB7 885 aaKnown RBP19.4■□□□□ 0.7
VPS26B-206ENST00000531741 CCAR2Q8N163 923 aaKnown RBP19.4■□□□□ 0.7
VPS26B-206ENST00000531741 FANCBQ8NB91 859 aa19.4■□□□□ 0.7
VPS26B-206ENST00000531741 HSD3B7Q9H2F3 369 aa19.4■□□□□ 0.7
VPS26B-206ENST00000531741 KIF2AO00139 706 aaPredicted RBP19.4■□□□□ 0.7
VPS26B-206ENST00000531741 SMC2O95347 1197 aa19.4■□□□□ 0.7
VPS26B-206ENST00000531741 CYP7A1P22680 504 aa19.4■□□□□ 0.7
VPS26B-206ENST00000531741 ZNF654Q8IZM8 581 aa19.4■□□□□ 0.7
VPS26B-206ENST00000531741 ZNF579Q8NAF0 562 aaKnown RBP19.4■□□□□ 0.7
VPS26B-206ENST00000531741 CLIC6Q96NY7 704 aa19.4■□□□□ 0.7
VPS26B-206ENST00000531741 CACNA1SQ13698 1873 aa19.4■□□□□ 0.7
VPS26B-206ENST00000531741 BTBD18B2RXH4 712 aa19.39■□□□□ 0.69
VPS26B-206ENST00000531741 PTPREP23469 700 aa19.39■□□□□ 0.69
VPS26B-206ENST00000531741 GUCY1A2P33402 732 aa19.39■□□□□ 0.69
VPS26B-206ENST00000531741 TOB1P50616 345 aaPredicted RBP19.39■□□□□ 0.69
VPS26B-206ENST00000531741 MYL5Q02045 173 aa19.39■□□□□ 0.69
VPS26B-206ENST00000531741 SF3B3Q15393 1217 aaKnown RBP19.39■□□□□ 0.69
VPS26B-206ENST00000531741 SEC23AQ15436 765 aa19.39■□□□□ 0.69
VPS26B-206ENST00000531741 PTPN14Q15678 1187 aa19.39■□□□□ 0.69
VPS26B-206ENST00000531741 RRP12Q5JTH9 1297 aaKnown RBP19.39■□□□□ 0.69
VPS26B-206ENST00000531741 METTL16Q86W50 562 aaKnown RBP19.39■□□□□ 0.69
VPS26B-206ENST00000531741 STK11IPQ8N1F8 1099 aa19.39■□□□□ 0.69
VPS26B-206ENST00000531741 CCDC112Q8NEF3 446 aa19.39■□□□□ 0.69
VPS26B-206ENST00000531741 ESR2Q92731 530 aa19.39■□□□□ 0.69
VPS26B-206ENST00000531741 HOOK1Q9UJC3 728 aaKnown RBP19.39■□□□□ 0.69
VPS26B-206ENST00000531741 UBE2Q2LH0YL09 131 aa19.39■□□□□ 0.69
VPS26B-206ENST00000531741 PCP11498 1178 aaKnown RBP19.39■□□□□ 0.69
VPS26B-206ENST00000531741 FANCCQ00597 558 aa19.39■□□□□ 0.69
VPS26B-206ENST00000531741 MIGA1Q8NAN2 632 aa19.39■□□□□ 0.69
VPS26B-206ENST00000531741 UBAC1Q9BSL1 405 aa19.39■□□□□ 0.69
VPS26B-206ENST00000531741 COL4A1P02462 1669 aa19.38■□□□□ 0.69
VPS26B-206ENST00000531741 MAGEB6P1A0A0J9YX57 407 aa19.38■□□□□ 0.69
VPS26B-206ENST00000531741 USP27XA6NNY8 438 aa19.38■□□□□ 0.69
VPS26B-206ENST00000531741 MDM2Q00987 491 aaPredicted RBP19.38■□□□□ 0.69
VPS26B-206ENST00000531741 PNOCQ13519 176 aa19.38■□□□□ 0.69
VPS26B-206ENST00000531741 LONRF3Q496Y0 759 aa19.38■□□□□ 0.69
VPS26B-206ENST00000531741 CNNM3Q8NE01 707 aa19.38■□□□□ 0.69
VPS26B-206ENST00000531741 ACSBG1Q96GR2 724 aa19.38■□□□□ 0.69
VPS26B-206ENST00000531741 RNF26Q9BY78 433 aaPredicted RBP19.38■□□□□ 0.69
VPS26B-206ENST00000531741 TOMM22Q9NS69 142 aa19.38■□□□□ 0.69
VPS26B-206ENST00000531741 BSDC1Q9NW68 430 aaPredicted RBP19.38■□□□□ 0.69
VPS26B-206ENST00000531741 FBXO2Q9UK22 296 aaPredicted RBP19.38■□□□□ 0.69
VPS26B-206ENST00000531741 SCN7AQ01118 1682 aa19.38■□□□□ 0.69
VPS26B-206ENST00000531741 DUOX1Q9NRD9 1551 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 CBFA2T2O43439 604 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 ARMCX5Q6P1M9 558 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 BARGINQ6ZT62 677 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 ADGRA1Q86SQ6 560 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 ANKRD18AQ8IVF6 992 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 ZKSCAN3Q9BRR0 538 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 RIOK1Q9BRS2 568 aaKnown RBP19.37■□□□□ 0.69
VPS26B-206ENST00000531741 BRIP1Q9BX63 1249 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 SPATA31A5Q5VU36 1347 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 SPATA31A7Q8IWB4 1347 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 PSDA5PKW4 1024 aaPredicted RBP19.37■□□□□ 0.69
VPS26B-206ENST00000531741 NRDCO43847 1150 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 FGRP09769 529 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 SFPQP23246 707 aaKnown RBP eCLIP19.37■□□□□ 0.69
VPS26B-206ENST00000531741 NT5DC1Q5TFE4 455 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 OLFM4Q6UX06 510 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 TMC6Q7Z403 805 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 CEP131Q9UPN4 1083 aa19.37■□□□□ 0.69
VPS26B-206ENST00000531741 COL1A1P02452 1464 aaPredicted RBP19.37■□□□□ 0.69
VPS26B-206ENST00000531741 CASZ1Q86V15 1759 aa19.36■□□□□ 0.69
VPS26B-206ENST00000531741 DLEC1Q9Y238 1755 aa19.36■□□□□ 0.69
VPS26B-206ENST00000531741 MYH6P13533 1939 aa19.36■□□□□ 0.69
VPS26B-206ENST00000531741 TUBB4AP04350 444 aa19.36■□□□□ 0.69
VPS26B-206ENST00000531741 LMOD1P29536 600 aaPredicted RBP19.36■□□□□ 0.69
VPS26B-206ENST00000531741 FOXP4Q8IVH2 680 aaPredicted RBP19.36■□□□□ 0.69
VPS26B-206ENST00000531741 KCNJ14Q9UNX9 436 aa19.36■□□□□ 0.69
VPS26B-206ENST00000531741 PCDHA5Q9Y5H7 936 aa19.36■□□□□ 0.69
VPS26B-206ENST00000531741 SRPRBQ9Y5M8 271 aaKnown RBP19.36■□□□□ 0.69
VPS26B-206ENST00000531741 TNKSO95271 1327 aa19.35■□□□□ 0.69
VPS26B-206ENST00000531741 PDS5AQ29RF7 1337 aaKnown RBP19.35■□□□□ 0.69
VPS26B-206ENST00000531741 SEMA3EO15041 775 aa19.35■□□□□ 0.69
VPS26B-206ENST00000531741 NCBP1Q09161 790 aaKnown RBP19.35■□□□□ 0.69
VPS26B-206ENST00000531741 PDCL2Q8N4E4 241 aa19.35■□□□□ 0.69
VPS26B-206ENST00000531741 RAI14Q9P0K7 980 aa19.35■□□□□ 0.69
VPS26B-206ENST00000531741 CAVIN4Q5BKX8 364 aa19.34■□□□□ 0.69
VPS26B-206ENST00000531741 E4F1Q66K89 784 aaPredicted RBP19.34■□□□□ 0.69
VPS26B-206ENST00000531741 SDR42E1Q8WUS8 393 aa19.34■□□□□ 0.69
VPS26B-206ENST00000531741 ATP1A3P13637 1013 aa19.34■□□□□ 0.69
VPS26B-206ENST00000531741 XBP1P17861 261 aa19.34■□□□□ 0.69
VPS26B-206ENST00000531741 GYG1P46976 350 aa19.34■□□□□ 0.69
VPS26B-206ENST00000531741 SLC10A5Q5PT55 438 aa19.34■□□□□ 0.69
VPS26B-206ENST00000531741 KANK3Q6NY19 840 aa19.34■□□□□ 0.69
VPS26B-206ENST00000531741 TRIML1Q8N9V2 468 aa19.34■□□□□ 0.69
VPS26B-206ENST00000531741 ZSCAN10Q96SZ4 725 aaPredicted RBP19.34■□□□□ 0.69
VPS26B-206ENST00000531741 ABCF2Q9UG63 623 aa19.34■□□□□ 0.69
VPS26B-206ENST00000531741 MINDY4BA8MYZ0 360 aa19.33■□□□□ 0.69
VPS26B-206ENST00000531741 ZBTB22O15209 634 aa19.33■□□□□ 0.69
VPS26B-206ENST00000531741 SARSP49591 514 aaKnown RBP19.33■□□□□ 0.69
VPS26B-206ENST00000531741 UBASH3AP57075 661 aa19.33■□□□□ 0.69
VPS26B-206ENST00000531741 FUT2Q10981 343 aa19.33■□□□□ 0.69
VPS26B-206ENST00000531741 ERFEQ4G0M1 354 aa19.33■□□□□ 0.69
VPS26B-206ENST00000531741 ISM2Q6H9L7 571 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms