RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 PKN1Q16512 942 aa7.4□□□□□ -1.22
USP47-211ENST00000531513 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.4□□□□□ -1.22
USP47-211ENST00000531513 KSR1Q8IVT5 923 aa7.4□□□□□ -1.22
USP47-211ENST00000531513 PRDM10Q9NQV6 1147 aa7.4□□□□□ -1.22
USP47-211ENST00000531513 GTF2IRD1Q9UHL9 959 aa7.4□□□□□ -1.22
USP47-211ENST00000531513 IGF2BP3O00425 579 aaKnown RBP eCLIP7.39□□□□□ -1.23
USP47-211ENST00000531513 GRIN3AQ8TCU5 1115 aa7.39□□□□□ -1.23
USP47-211ENST00000531513 NECAB3Q96P71 396 aaPredicted RBP7.39□□□□□ -1.23
USP47-211ENST00000531513 KRTAP4-5Q9BYR2 181 aa7.39□□□□□ -1.23
USP47-211ENST00000531513 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.39□□□□□ -1.23
USP47-211ENST00000531513 DCDC2CA8MYV0 355 aa7.38□□□□□ -1.23
USP47-211ENST00000531513 ENC1O14682 589 aa7.38□□□□□ -1.23
USP47-211ENST00000531513 ZP2Q05996 745 aa7.38□□□□□ -1.23
USP47-211ENST00000531513 MESP2Q0VG99 397 aa7.38□□□□□ -1.23
USP47-211ENST00000531513 DSC3Q14574 896 aa7.38□□□□□ -1.23
USP47-211ENST00000531513 ENOX2Q16206 610 aaKnown RBP7.38□□□□□ -1.23
USP47-211ENST00000531513 TPTE2Q6XPS3 522 aa7.38□□□□□ -1.23
USP47-211ENST00000531513 SPOCD1Q6ZMY3 1216 aa7.38□□□□□ -1.23
USP47-211ENST00000531513 ZSWIM9Q86XI8 627 aa7.38□□□□□ -1.23
USP47-211ENST00000531513 ASB11Q8WXH4 323 aa7.38□□□□□ -1.23
USP47-211ENST00000531513 DCTN4Q9UJW0 460 aa7.38□□□□□ -1.23
USP47-211ENST00000531513 PAGE1O75459 146 aa7.37□□□□□ -1.23
USP47-211ENST00000531513 RING1Q06587 406 aa7.37□□□□□ -1.23
USP47-211ENST00000531513 NKPD1Q17RQ9 610 aa7.37□□□□□ -1.23
USP47-211ENST00000531513 PICK1Q9NRD5 415 aa7.37□□□□□ -1.23
USP47-211ENST00000531513 PITPNM2Q9BZ72 1349 aa7.36□□□□□ -1.23
USP47-211ENST00000531513 ZNF503-AS2A6NEH8 195 aa7.36□□□□□ -1.23
USP47-211ENST00000531513 LRRC10BA6NIK2 292 aa7.36□□□□□ -1.23
USP47-211ENST00000531513 FBXO24O75426 580 aa7.36□□□□□ -1.23
USP47-211ENST00000531513 TRIM37O94972 964 aa7.36□□□□□ -1.23
USP47-211ENST00000531513 BMP6P22004 513 aa7.36□□□□□ -1.23
USP47-211ENST00000531513 ZBTB37Q5TC79 503 aa7.36□□□□□ -1.23
USP47-211ENST00000531513 RASIP1Q5U651 963 aa7.36□□□□□ -1.23
USP47-211ENST00000531513 C12orf40Q86WS4 652 aa7.36□□□□□ -1.23
USP47-211ENST00000531513 SLC38A3Q99624 504 aa7.36□□□□□ -1.23
USP47-211ENST00000531513 BIN2Q9UBW5 565 aaPredicted RBP7.36□□□□□ -1.23
USP47-211ENST00000531513 CTNND2Q9UQB3 1225 aa7.36□□□□□ -1.23
USP47-211ENST00000531513 GNAT3A8MTJ3 354 aa7.35□□□□□ -1.23
USP47-211ENST00000531513 TREHO43280 583 aa7.35□□□□□ -1.23
USP47-211ENST00000531513 EOMESO95936 686 aa7.35□□□□□ -1.23
USP47-211ENST00000531513 GSTT1P30711 240 aa7.35□□□□□ -1.23
USP47-211ENST00000531513 CLCN7P51798 805 aa7.35□□□□□ -1.23
USP47-211ENST00000531513 KCNMB1Q16558 191 aa7.35□□□□□ -1.23
USP47-211ENST00000531513 IVNS1ABPQ9Y6Y0 642 aa7.35□□□□□ -1.23
USP47-211ENST00000531513 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.34□□□□□ -1.23
USP47-211ENST00000531513 FANCGO15287 622 aa7.34□□□□□ -1.23
USP47-211ENST00000531513 MLANAQ16655 118 aa7.34□□□□□ -1.23
USP47-211ENST00000531513 FBLN7Q53RD9 439 aa7.34□□□□□ -1.23
USP47-211ENST00000531513 LLGL2Q6P1M3 1020 aa7.34□□□□□ -1.23
USP47-211ENST00000531513 ARMCX6Q7L4S7 300 aa7.34□□□□□ -1.23
USP47-211ENST00000531513 FAM84AQ96KN4 292 aa7.34□□□□□ -1.23
USP47-211ENST00000531513 CEP44Q9C0F1 390 aa7.34□□□□□ -1.23
USP47-211ENST00000531513 PRDM5Q9NQX1 630 aaPredicted RBP7.34□□□□□ -1.23
USP47-211ENST00000531513 SAMM50Q9Y512 469 aa7.34□□□□□ -1.23
USP47-211ENST00000531513 KRTAP9-7A8MTY7 169 aa7.33□□□□□ -1.24
USP47-211ENST00000531513 MAPK1P28482 360 aa7.33□□□□□ -1.24
USP47-211ENST00000531513 RBM25P49756 843 aaKnown RBP7.33□□□□□ -1.24
USP47-211ENST00000531513 PLCB3Q01970 1234 aa7.33□□□□□ -1.24
USP47-211ENST00000531513 FYB2Q5VWT5 728 aa7.33□□□□□ -1.24
USP47-211ENST00000531513 FOXQ1Q9C009 403 aa7.33□□□□□ -1.24
USP47-211ENST00000531513 PPM1HQ9ULR3 514 aa7.33□□□□□ -1.24
USP47-211ENST00000531513 PCDHA4Q9UN74 947 aa7.33□□□□□ -1.24
USP47-211ENST00000531513 MAPK8IP1Q9UQF2 711 aa7.33□□□□□ -1.24
USP47-211ENST00000531513 SND1Q7KZF4 910 aaKnown RBP eCLIP7.32□□□□□ -1.24
USP47-211ENST00000531513 CDC37L1Q7L3B6 337 aa7.32□□□□□ -1.24
USP47-211ENST00000531513 ZNF428Q96B54 188 aa7.32□□□□□ -1.24
USP47-211ENST00000531513 LIN37Q96GY3 246 aaPredicted RBP7.32□□□□□ -1.24
USP47-211ENST00000531513 SETDB2Q96T68 719 aa7.32□□□□□ -1.24
USP47-211ENST00000531513 FAM53CQ9NYF3 392 aa7.32□□□□□ -1.24
USP47-211ENST00000531513 SLITRK5O94991 958 aa7.31□□□□□ -1.24
USP47-211ENST00000531513 LRRC14Q15048 493 aa7.31□□□□□ -1.24
USP47-211ENST00000531513 CCDC27Q2M243 656 aa7.31□□□□□ -1.24
USP47-211ENST00000531513 CILP2Q8IUL8 1156 aa7.31□□□□□ -1.24
USP47-211ENST00000531513 KCT2Q8NC54 265 aa7.31□□□□□ -1.24
USP47-211ENST00000531513 BHLHE22Q8NFJ8 381 aaPredicted RBP7.31□□□□□ -1.24
USP47-211ENST00000531513 FBF1Q8TES7 1133 aa7.31□□□□□ -1.24
USP47-211ENST00000531513 ELMO3Q96BJ8 720 aa7.31□□□□□ -1.24
USP47-211ENST00000531513 OSBPL7Q9BZF2 842 aa7.31□□□□□ -1.24
USP47-211ENST00000531513 SRCIN1Q9C0H9 1055 aa7.31□□□□□ -1.24
USP47-211ENST00000531513 CARS2Q9HA77 564 aaKnown RBP7.31□□□□□ -1.24
USP47-211ENST00000531513 PRAMEF27A3QJZ7 478 aa7.3□□□□□ -1.24
USP47-211ENST00000531513 PRR33A8MZF0 331 aa7.3□□□□□ -1.24
USP47-211ENST00000531513 LRIG2O94898 1065 aa7.3□□□□□ -1.24
USP47-211ENST00000531513 CELA3AP09093 270 aa7.3□□□□□ -1.24
USP47-211ENST00000531513 LRFN4Q6PJG9 635 aa7.3□□□□□ -1.24
USP47-211ENST00000531513 HSPA12BQ96MM6 686 aa7.3□□□□□ -1.24
USP47-211ENST00000531513 FBRSQ9HAH7 460 aa7.3□□□□□ -1.24
USP47-211ENST00000531513 ATP13A1Q9HD20 1204 aa7.3□□□□□ -1.24
USP47-211ENST00000531513 LMCD1Q9NZU5 365 aa7.3□□□□□ -1.24
USP47-211ENST00000531513 AFMP43652 599 aa7.29□□□□□ -1.24
USP47-211ENST00000531513 MAPK8P45983 427 aa7.29□□□□□ -1.24
USP47-211ENST00000531513 PCNX4Q63HM2 1172 aa7.29□□□□□ -1.24
USP47-211ENST00000531513 SCARA3Q6AZY7 606 aa7.29□□□□□ -1.24
USP47-211ENST00000531513 ZNF507Q8TCN5 953 aa7.29□□□□□ -1.24
USP47-211ENST00000531513 SEMA3GQ9NS98 782 aa7.29□□□□□ -1.24
USP47-211ENST00000531513 C19orf73Q9NVV2 129 aa7.29□□□□□ -1.24
USP47-211ENST00000531513 CNTNAP4Q9C0A0 1308 aa7.28□□□□□ -1.24
USP47-211ENST00000531513 FAM155AB1AL88 458 aaPredicted RBP7.28□□□□□ -1.24
USP47-211ENST00000531513 E9PSI1 815 aa7.28□□□□□ -1.24
USP47-211ENST00000531513 GLI1P08151 1106 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms