RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 KIAA0100Q14667 2235 aaKnown RBP15.73■□□□□ 0.11
TM9SF1-211ENST00000531406 BRCA2P51587 3418 aa15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 SURF6O75683 361 aaKnown RBP15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 BAG3O95817 575 aa15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 GJB1P08034 283 aa15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 CAP2P40123 477 aa15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 UBXN2AP68543 259 aa15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 NAA16Q6N069 864 aaPredicted RBP15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 PROCA1Q8NCQ7 364 aaPredicted RBP15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 ZNF280CQ8ND82 737 aa15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 SLAIN1Q8ND83 568 aa15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 NKX2-3Q8TAU0 364 aa15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 C1orf115Q9H7X2 142 aa15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 HERC5Q9UII4 1024 aaKnown RBP15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 DOCK2Q92608 1830 aa15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 MYH2Q9UKX2 1941 aa15.72■□□□□ 0.11
TM9SF1-211ENST00000531406 USP17L5A8MUK1 530 aa15.71■□□□□ 0.11
TM9SF1-211ENST00000531406 CYP2E1P05181 493 aaPredicted RBP15.71■□□□□ 0.11
TM9SF1-211ENST00000531406 GJA8P48165 433 aa15.71■□□□□ 0.11
TM9SF1-211ENST00000531406 FLT3LGP49771 235 aa15.71■□□□□ 0.11
TM9SF1-211ENST00000531406 PPP4CP60510 307 aa15.71■□□□□ 0.11
TM9SF1-211ENST00000531406 HNRNPUQ00839 825 aaKnown RBP eCLIP15.71■□□□□ 0.11
TM9SF1-211ENST00000531406 ZNF512BQ96KM6 892 aaPredicted RBP15.71■□□□□ 0.11
TM9SF1-211ENST00000531406 YTHDC1Q96MU7 727 aaKnown RBP15.71■□□□□ 0.11
TM9SF1-211ENST00000531406 TBC1D2Q9BYX2 928 aa15.71■□□□□ 0.11
TM9SF1-211ENST00000531406 RNF208Q9H0X6 261 aa15.71■□□□□ 0.11
TM9SF1-211ENST00000531406 AATFQ9NY61 560 aaKnown RBP eCLIP15.71■□□□□ 0.11
TM9SF1-211ENST00000531406 PI4KBQ9UBF8 816 aa15.71■□□□□ 0.11
TM9SF1-211ENST00000531406 NOP58Q9Y2X3 529 aaKnown RBP15.71■□□□□ 0.11
TM9SF1-211ENST00000531406 H0YGN5 161 aa15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 TNPO2O14787 897 aaKnown RBP15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 ZBTB7BO15156 539 aaPredicted RBP15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 ADCY3O60266 1144 aa15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 PLCG2P16885 1265 aa15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 ZAP70P43403 619 aa15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 ADGRA1Q86SQ6 560 aa15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 MAPKAPK5Q8IW41 473 aa15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 FTSJ3Q8IY81 847 aaKnown RBP15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 ANKRD13CQ8N6S4 541 aa15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 DHX36Q9H2U1 1008 aaKnown RBP15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 PIH1D3Q9NQM4 214 aaKnown RBP15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 PNMA3Q9UL41 463 aa15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 AK9Q5TCS8 1911 aa15.7■□□□□ 0.1
TM9SF1-211ENST00000531406 IGSF3O75054 1194 aa15.69■□□□□ 0.1
TM9SF1-211ENST00000531406 RLBP1P12271 317 aa15.69■□□□□ 0.1
TM9SF1-211ENST00000531406 ELNP15502 786 aa15.69■□□□□ 0.1
TM9SF1-211ENST00000531406 HMGCS2P54868 508 aa15.69■□□□□ 0.1
TM9SF1-211ENST00000531406 IRF5Q13568 498 aa15.69■□□□□ 0.1
TM9SF1-211ENST00000531406 SH3D19Q5HYK7 790 aa15.69■□□□□ 0.1
TM9SF1-211ENST00000531406 UBE2Q1Q7Z7E8 422 aa15.69■□□□□ 0.1
TM9SF1-211ENST00000531406 ITPRIPQ8IWB1 547 aa15.69■□□□□ 0.1
TM9SF1-211ENST00000531406 PXYLP1Q8TE99 480 aa15.69■□□□□ 0.1
TM9SF1-211ENST00000531406 TGFBRAP1Q8WUH2 860 aa15.69■□□□□ 0.1
TM9SF1-211ENST00000531406 UNC93B1Q9H1C4 597 aa15.69■□□□□ 0.1
TM9SF1-211ENST00000531406 DBNLQ9UJU6 430 aaKnown RBP15.69■□□□□ 0.1
TM9SF1-211ENST00000531406 GCLCP48506 637 aaPredicted RBP15.68■□□□□ 0.1
TM9SF1-211ENST00000531406 PABPC4Q13310 644 aaKnown RBP eCLIP15.68■□□□□ 0.1
TM9SF1-211ENST00000531406 FAM110CQ1W6H9 321 aa15.68■□□□□ 0.1
TM9SF1-211ENST00000531406 FOXP4Q8IVH2 680 aaPredicted RBP15.68■□□□□ 0.1
TM9SF1-211ENST00000531406 U2AF1L4Q8WU68 220 aaKnown RBP15.68■□□□□ 0.1
TM9SF1-211ENST00000531406 COA7Q96BR5 231 aa15.68■□□□□ 0.1
TM9SF1-211ENST00000531406 WDR18Q9BV38 432 aa15.68■□□□□ 0.1
TM9SF1-211ENST00000531406 CCDC8Q9H0W5 538 aaPredicted RBP15.68■□□□□ 0.1
TM9SF1-211ENST00000531406 AS3MTQ9HBK9 375 aa15.68■□□□□ 0.1
TM9SF1-211ENST00000531406 TLR7Q9NYK1 1049 aaKnown RBP15.68■□□□□ 0.1
TM9SF1-211ENST00000531406 COLQQ9Y215 455 aaPredicted RBP15.68■□□□□ 0.1
TM9SF1-211ENST00000531406 FLT1P17948 1338 aa15.68■□□□□ 0.1
TM9SF1-211ENST00000531406 INHAP05111 366 aa15.67■□□□□ 0.1
TM9SF1-211ENST00000531406 JAG1P78504 1218 aa15.67■□□□□ 0.1
TM9SF1-211ENST00000531406 METTL16Q86W50 562 aaKnown RBP15.67■□□□□ 0.1
TM9SF1-211ENST00000531406 EAF2Q96CJ1 260 aaPredicted RBP15.67■□□□□ 0.1
TM9SF1-211ENST00000531406 ASCC2Q9H1I8 757 aaPredicted RBP15.67■□□□□ 0.1
TM9SF1-211ENST00000531406 DNAJC18Q9H819 358 aa15.67■□□□□ 0.1
TM9SF1-211ENST00000531406 PALD1Q9ULE6 856 aa15.67■□□□□ 0.1
TM9SF1-211ENST00000531406 DOCK1Q14185 1865 aa15.67■□□□□ 0.1
TM9SF1-211ENST00000531406 SGPL1O95470 568 aa15.66■□□□□ 0.1
TM9SF1-211ENST00000531406 ASNSP08243 561 aa15.66■□□□□ 0.1
TM9SF1-211ENST00000531406 CYP7A1P22680 504 aa15.66■□□□□ 0.1
TM9SF1-211ENST00000531406 BACE1P56817 501 aa15.66■□□□□ 0.1
TM9SF1-211ENST00000531406 DYNLL1P63167 89 aaKnown RBP15.66■□□□□ 0.1
TM9SF1-211ENST00000531406 CRACR2BQ8N4Y2 399 aaPredicted RBP15.66■□□□□ 0.1
TM9SF1-211ENST00000531406 DPF3Q92784 378 aa15.66■□□□□ 0.1
TM9SF1-211ENST00000531406 SAP30BPQ9UHR5 308 aaKnown RBP15.66■□□□□ 0.1
TM9SF1-211ENST00000531406 TAOK2Q9UL54 1235 aa15.66■□□□□ 0.1
TM9SF1-211ENST00000531406 FXR1P51114 621 aaKnown RBP eCLIP15.65■□□□□ 0.1
TM9SF1-211ENST00000531406 MTMR2Q13614 643 aa15.65■□□□□ 0.1
TM9SF1-211ENST00000531406 SHROOM1Q2M3G4 852 aaPredicted RBP15.65■□□□□ 0.1
TM9SF1-211ENST00000531406 CEP85Q6P2H3 762 aa15.65■□□□□ 0.1
TM9SF1-211ENST00000531406 HTATIP2Q9BUP3 242 aa15.65■□□□□ 0.1
TM9SF1-211ENST00000531406 TRIM34Q9BYJ4 488 aa15.65■□□□□ 0.1
TM9SF1-211ENST00000531406 GINM1Q9NU53 330 aa15.65■□□□□ 0.1
TM9SF1-211ENST00000531406 PHIPQ8WWQ0 1821 aa15.64■□□□□ 0.09
TM9SF1-211ENST00000531406 IDH1O75874 414 aaKnown RBP15.64■□□□□ 0.09
TM9SF1-211ENST00000531406 FARP2O94887 1054 aaPredicted RBP15.64■□□□□ 0.09
TM9SF1-211ENST00000531406 CAPN2P17655 700 aa15.64■□□□□ 0.09
TM9SF1-211ENST00000531406 HOXA7P31268 230 aaPredicted RBP15.64■□□□□ 0.09
TM9SF1-211ENST00000531406 DEFB118Q96PH6 123 aa15.64■□□□□ 0.09
TM9SF1-211ENST00000531406 P2RX7Q99572 595 aaKnown RBP15.64■□□□□ 0.09
TM9SF1-211ENST00000531406 TMOD4Q9NZQ9 345 aa15.64■□□□□ 0.09
TM9SF1-211ENST00000531406 MORF4L1Q9UBU8 362 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms