RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 COL2A1P02458 1487 aaPredicted RBP11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 MROH7-TTC4A0A0A0MT08 1334 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 TRIM75PA6NK02 468 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 E9PSI1 815 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 UBTFL1P0CB47 393 aaPredicted RBP11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 IL15P40933 162 aaPredicted RBP11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 TIMM10P62072 90 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 UBXN2AP68543 259 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 PICALMQ13492 652 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 IRF5Q13568 498 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 ALDH1L2Q3SY69 923 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 PI16Q6UXB8 463 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 FASTKD5Q7L8L6 764 aaKnown RBP11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 TRMT2AQ8IZ69 625 aaKnown RBP11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 PXYLP1Q8TE99 480 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 FAM163AQ96GL9 167 aaPredicted RBP11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 DEFB118Q96PH6 123 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 MEIS3Q99687 375 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 GDF15Q99988 308 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 SMC4Q9NTJ3 1288 aa11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 GNL3LQ9NVN8 582 aaKnown RBP11.44□□□□□ -0.58
CHMP4A-205ENST00000531158 GPR75-ASB3A0A0A6YYF3 556 aa11.43□□□□□ -0.58
CHMP4A-205ENST00000531158 TNPO2O14787 897 aaKnown RBP11.43□□□□□ -0.58
CHMP4A-205ENST00000531158 CTNND1O60716 968 aaKnown RBP11.43□□□□□ -0.58
CHMP4A-205ENST00000531158 MECOMQ03112 1051 aa11.43□□□□□ -0.58
CHMP4A-205ENST00000531158 TRIM32Q13049 653 aa11.43□□□□□ -0.58
CHMP4A-205ENST00000531158 ANKRD13CQ8N6S4 541 aa11.43□□□□□ -0.58
CHMP4A-205ENST00000531158 PICK1Q9NRD5 415 aa11.43□□□□□ -0.58
CHMP4A-205ENST00000531158 ABCF2Q9UG63 623 aa11.43□□□□□ -0.58
CHMP4A-205ENST00000531158 AGTPBP1Q9UPW5 1226 aa11.43□□□□□ -0.58
CHMP4A-205ENST00000531158 EYSQ5T1H1 3165 aa11.42□□□□□ -0.58
CHMP4A-205ENST00000531158 CDH23Q9H251 3354 aa11.42□□□□□ -0.58
CHMP4A-205ENST00000531158 A0A1B0GUL7 405 aa11.42□□□□□ -0.58
CHMP4A-205ENST00000531158 JAG1P78504 1218 aa11.42□□□□□ -0.58
CHMP4A-205ENST00000531158 TFCP2Q12800 502 aa11.42□□□□□ -0.58
CHMP4A-205ENST00000531158 DZIP1Q86YF9 867 aaKnown RBP11.42□□□□□ -0.58
CHMP4A-205ENST00000531158 ZSCAN29Q8IWY8 852 aaPredicted RBP11.42□□□□□ -0.58
CHMP4A-205ENST00000531158 SMCR8Q8TEV9 937 aaPredicted RBP11.42□□□□□ -0.58
CHMP4A-205ENST00000531158 XAGE2Q96GT9 111 aa11.42□□□□□ -0.58
CHMP4A-205ENST00000531158 PAWRQ96IZ0 340 aaKnown RBP11.42□□□□□ -0.58
CHMP4A-205ENST00000531158 NOB1Q9ULX3 412 aaKnown RBP11.42□□□□□ -0.58
CHMP4A-205ENST00000531158 TBC1D12O60347 775 aa11.41□□□□□ -0.58
CHMP4A-205ENST00000531158 PEX10O60683 326 aa11.41□□□□□ -0.58
CHMP4A-205ENST00000531158 FAM110CQ1W6H9 321 aa11.41□□□□□ -0.58
CHMP4A-205ENST00000531158 SHROOM1Q2M3G4 852 aaPredicted RBP11.41□□□□□ -0.58
CHMP4A-205ENST00000531158 TBC1D9Q6ZT07 1266 aa11.41□□□□□ -0.58
CHMP4A-205ENST00000531158 TDHQ8IZJ6 230 aa11.41□□□□□ -0.58
CHMP4A-205ENST00000531158 SYMPKQ92797 1274 aaKnown RBP11.41□□□□□ -0.58
CHMP4A-205ENST00000531158 NSUN4Q96CB9 384 aaKnown RBP11.41□□□□□ -0.58
CHMP4A-205ENST00000531158 GUCD1Q96NT3 240 aa11.41□□□□□ -0.58
CHMP4A-205ENST00000531158 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.41□□□□□ -0.58
CHMP4A-205ENST00000531158 HMG20BQ9P0W2 317 aa11.41□□□□□ -0.58
CHMP4A-205ENST00000531158 GJD2Q9UKL4 321 aa11.41□□□□□ -0.58
CHMP4A-205ENST00000531158 SUPT16HQ9Y5B9 1047 aaKnown RBP11.41□□□□□ -0.58
CHMP4A-205ENST00000531158 LTBP2Q14767 1821 aa11.4□□□□□ -0.58
CHMP4A-205ENST00000531158 NPM3O75607 178 aaKnown RBP11.4□□□□□ -0.58
CHMP4A-205ENST00000531158 HMGCS2P54868 508 aa11.4□□□□□ -0.58
CHMP4A-205ENST00000531158 SPP2Q13103 211 aa11.4□□□□□ -0.58
CHMP4A-205ENST00000531158 POTEEQ6S8J3 1075 aa11.4□□□□□ -0.58
CHMP4A-205ENST00000531158 ZGPATQ8N5A5 531 aaKnown RBP11.4□□□□□ -0.58
CHMP4A-205ENST00000531158 PROCA1Q8NCQ7 364 aaPredicted RBP11.4□□□□□ -0.58
CHMP4A-205ENST00000531158 FAM161BQ96MY7 647 aa11.4□□□□□ -0.58
CHMP4A-205ENST00000531158 OSBPL5Q9H0X9 879 aaPredicted RBP11.4□□□□□ -0.58
CHMP4A-205ENST00000531158 TAOK2Q9UL54 1235 aa11.4□□□□□ -0.58
CHMP4A-205ENST00000531158 ZMYND8Q9ULU4 1186 aaPredicted RBP11.4□□□□□ -0.58
CHMP4A-205ENST00000531158 TNNQ9UQP3 1299 aa11.4□□□□□ -0.58
CHMP4A-205ENST00000531158 PARP14Q460N5 1801 aa11.39□□□□□ -0.59
CHMP4A-205ENST00000531158 RLFQ13129 1914 aa11.39□□□□□ -0.59
CHMP4A-205ENST00000531158 TFRCP02786 760 aaKnown RBP11.39□□□□□ -0.59
CHMP4A-205ENST00000531158 HOXD11P31277 338 aaPredicted RBP11.39□□□□□ -0.59
CHMP4A-205ENST00000531158 CAP2P40123 477 aa11.39□□□□□ -0.59
CHMP4A-205ENST00000531158 MTX1Q13505 466 aa11.39□□□□□ -0.59
CHMP4A-205ENST00000531158 C7orf61Q8IZ16 206 aa11.39□□□□□ -0.59
CHMP4A-205ENST00000531158 ZNF280CQ8ND82 737 aa11.39□□□□□ -0.59
CHMP4A-205ENST00000531158 TRIB2Q92519 343 aa11.39□□□□□ -0.59
CHMP4A-205ENST00000531158 DNAJC18Q9H819 358 aa11.39□□□□□ -0.59
CHMP4A-205ENST00000531158 SRGAP3O43295 1099 aa11.38□□□□□ -0.59
CHMP4A-205ENST00000531158 MCAMP43121 646 aa11.38□□□□□ -0.59
CHMP4A-205ENST00000531158 SH3D19Q5HYK7 790 aa11.38□□□□□ -0.59
CHMP4A-205ENST00000531158 ADGRA1Q86SQ6 560 aa11.38□□□□□ -0.59
CHMP4A-205ENST00000531158 SPATA5Q8NB90 893 aa11.38□□□□□ -0.59
CHMP4A-205ENST00000531158 SH3RF3Q8TEJ3 882 aaPredicted RBP11.38□□□□□ -0.59
CHMP4A-205ENST00000531158 COA7Q96BR5 231 aa11.38□□□□□ -0.59
CHMP4A-205ENST00000531158 ASCC2Q9H1I8 757 aaPredicted RBP11.38□□□□□ -0.59
CHMP4A-205ENST00000531158 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHMP4A-205ENST00000531158 TXNRD2Q9NNW7 524 aa11.38□□□□□ -0.59
CHMP4A-205ENST00000531158 PFASO15067 1338 aa11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 MYH8P13535 1937 aa11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 TMEM265A0A087WTH1 108 aa11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 TNFRSF10AO00220 468 aa11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 HMGCRP04035 888 aa11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 SYN1P17600 705 aa11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 ARID4AP29374 1257 aaPredicted RBP11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 MAGEA10P43363 369 aaPredicted RBP11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 MVPQ14764 893 aaKnown RBP11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 MAP3K21Q5TCX8 1036 aa11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 SPTY2D1Q68D10 685 aaPredicted RBP11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 ERICH6Q7L0X2 663 aa11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 SLF2Q8IX21 1173 aa11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 API5Q9BZZ5 524 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms