RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 COLQQ9Y215 455 aaPredicted RBP19.44■□□□□ 0.7
CHMP4A-204ENST00000530996 MAP4K4O95819 1239 aaPredicted RBP19.43■□□□□ 0.7
CHMP4A-204ENST00000530996 GJB1P08034 283 aa19.43■□□□□ 0.7
CHMP4A-204ENST00000530996 GJA8P48165 433 aa19.43■□□□□ 0.7
CHMP4A-204ENST00000530996 FLT3LGP49771 235 aa19.43■□□□□ 0.7
CHMP4A-204ENST00000530996 MAP3K10Q02779 954 aa19.43■□□□□ 0.7
CHMP4A-204ENST00000530996 NAA16Q6N069 864 aaPredicted RBP19.43■□□□□ 0.7
CHMP4A-204ENST00000530996 FTSJ3Q8IY81 847 aaKnown RBP19.43■□□□□ 0.7
CHMP4A-204ENST00000530996 COA7Q96BR5 231 aa19.43■□□□□ 0.7
CHMP4A-204ENST00000530996 HTATIP2Q9BUP3 242 aa19.43■□□□□ 0.7
CHMP4A-204ENST00000530996 UNC93B1Q9H1C4 597 aa19.43■□□□□ 0.7
CHMP4A-204ENST00000530996 TBC1D12O60347 775 aa19.42■□□□□ 0.7
CHMP4A-204ENST00000530996 NPM3O75607 178 aaKnown RBP19.42■□□□□ 0.7
CHMP4A-204ENST00000530996 FARP2O94887 1054 aaPredicted RBP19.42■□□□□ 0.7
CHMP4A-204ENST00000530996 INHAP05111 366 aa19.42■□□□□ 0.7
CHMP4A-204ENST00000530996 HMGCS2P54868 508 aa19.42■□□□□ 0.7
CHMP4A-204ENST00000530996 SPP2Q13103 211 aa19.42■□□□□ 0.7
CHMP4A-204ENST00000530996 CCDC158Q5M9N0 1113 aa19.42■□□□□ 0.7
CHMP4A-204ENST00000530996 ZKSCAN2Q63HK3 967 aa19.42■□□□□ 0.7
CHMP4A-204ENST00000530996 TMEM57Q8N5G2 664 aa19.42■□□□□ 0.7
CHMP4A-204ENST00000530996 PROCA1Q8NCQ7 364 aaPredicted RBP19.42■□□□□ 0.7
CHMP4A-204ENST00000530996 SH3RF3Q8TEJ3 882 aaPredicted RBP19.42■□□□□ 0.7
CHMP4A-204ENST00000530996 U2AF1L4Q8WU68 220 aaKnown RBP19.42■□□□□ 0.7
CHMP4A-204ENST00000530996 AATFQ9NY61 560 aaKnown RBP eCLIP19.42■□□□□ 0.7
CHMP4A-204ENST00000530996 BAG3O95817 575 aa19.41■□□□□ 0.7
CHMP4A-204ENST00000530996 PABPC4Q13310 644 aaKnown RBP eCLIP19.41■□□□□ 0.72e-6■■■□□ 18.3
CHMP4A-204ENST00000530996 FAM110CQ1W6H9 321 aa19.41■□□□□ 0.7
CHMP4A-204ENST00000530996 TNNI3KQ59H18 835 aa19.41■□□□□ 0.7
CHMP4A-204ENST00000530996 CHRDL2Q6WN34 429 aa19.41■□□□□ 0.7
CHMP4A-204ENST00000530996 ZNF280CQ8ND82 737 aa19.41■□□□□ 0.7
CHMP4A-204ENST00000530996 C1orf115Q9H7X2 142 aa19.41■□□□□ 0.7
CHMP4A-204ENST00000530996 AS3MTQ9HBK9 375 aa19.41■□□□□ 0.7
CHMP4A-204ENST00000530996 FPGT-TNNI3KV9GXZ4 949 aa19.41■□□□□ 0.7
CHMP4A-204ENST00000530996 MAST2Q6P0Q8 1798 aa19.4■□□□□ 0.7
CHMP4A-204ENST00000530996 USP17L5A8MUK1 530 aa19.4■□□□□ 0.7
CHMP4A-204ENST00000530996 PLCG2P16885 1265 aa19.4■□□□□ 0.7
CHMP4A-204ENST00000530996 CAP2P40123 477 aa19.4■□□□□ 0.7
CHMP4A-204ENST00000530996 FXR1P51114 621 aaKnown RBP eCLIP19.4■□□□□ 0.7
CHMP4A-204ENST00000530996 MAPKAPK5Q8IW41 473 aa19.4■□□□□ 0.7
CHMP4A-204ENST00000530996 ITPRIPQ8IWB1 547 aa19.4■□□□□ 0.7
CHMP4A-204ENST00000530996 CRACR2BQ8N4Y2 399 aaPredicted RBP19.4■□□□□ 0.7
CHMP4A-204ENST00000530996 DBNDD2Q9BQY9 259 aa19.4■□□□□ 0.7
CHMP4A-204ENST00000530996 TBC1D2Q9BYX2 928 aa19.4■□□□□ 0.7
CHMP4A-204ENST00000530996 HERC5Q9UII4 1024 aaKnown RBP19.4■□□□□ 0.7
CHMP4A-204ENST00000530996 SURF6O75683 361 aaKnown RBP19.38■□□□□ 0.69
CHMP4A-204ENST00000530996 FLT1P17948 1338 aa19.38■□□□□ 0.69
CHMP4A-204ENST00000530996 IRX3P78415 501 aaPredicted RBP19.38■□□□□ 0.69
CHMP4A-204ENST00000530996 MTMR2Q13614 643 aa19.38■□□□□ 0.69
CHMP4A-204ENST00000530996 TGFBRAP1Q8WUH2 860 aa19.38■□□□□ 0.69
CHMP4A-204ENST00000530996 DHX36Q9H2U1 1008 aaKnown RBP19.38■□□□□ 0.69
CHMP4A-204ENST00000530996 TMOD4Q9NZQ9 345 aa19.38■□□□□ 0.69
CHMP4A-204ENST00000530996 TFRCP02786 760 aaKnown RBP19.37■□□□□ 0.69
CHMP4A-204ENST00000530996 GCLCP48506 637 aaPredicted RBP19.37■□□□□ 0.69
CHMP4A-204ENST00000530996 IRF5Q13568 498 aa19.37■□□□□ 0.69
CHMP4A-204ENST00000530996 PXYLP1Q8TE99 480 aa19.37■□□□□ 0.69
CHMP4A-204ENST00000530996 DEFB118Q96PH6 123 aa19.37■□□□□ 0.69
CHMP4A-204ENST00000530996 GPR108Q9NPR9 543 aa19.37■□□□□ 0.69
CHMP4A-204ENST00000530996 PI4KBQ9UBF8 816 aa19.37■□□□□ 0.69
CHMP4A-204ENST00000530996 PTPRFP10586 1907 aa19.36■□□□□ 0.69
CHMP4A-204ENST00000530996 HLA-DOAP06340 250 aa19.36■□□□□ 0.69
CHMP4A-204ENST00000530996 HNRNPUQ00839 825 aaKnown RBP eCLIP19.36■□□□□ 0.69
CHMP4A-204ENST00000530996 POLA2Q14181 598 aa19.36■□□□□ 0.69
CHMP4A-204ENST00000530996 RRP1BQ14684 758 aaKnown RBP19.36■□□□□ 0.69
CHMP4A-204ENST00000530996 ASCC2Q9H1I8 757 aaPredicted RBP19.36■□□□□ 0.69
CHMP4A-204ENST00000530996 SAP30BPQ9UHR5 308 aaKnown RBP19.36■□□□□ 0.69
CHMP4A-204ENST00000530996 NR2E3Q9Y5X4 410 aa19.36■□□□□ 0.69
CHMP4A-204ENST00000530996 PHIPQ8WWQ0 1821 aa19.36■□□□□ 0.69
CHMP4A-204ENST00000530996 LOC285556D6RIA3 1793 aa19.36■□□□□ 0.69
CHMP4A-204ENST00000530996 GDF11O95390 407 aa19.35■□□□□ 0.69
CHMP4A-204ENST00000530996 SGPL1O95470 568 aa19.35■□□□□ 0.69
CHMP4A-204ENST00000530996 ASNSP08243 561 aa19.35■□□□□ 0.69
CHMP4A-204ENST00000530996 ZAP70P43403 619 aa19.35■□□□□ 0.69
CHMP4A-204ENST00000530996 ADGRA1Q86SQ6 560 aa19.35■□□□□ 0.69
CHMP4A-204ENST00000530996 TLR7Q9NYK1 1049 aaKnown RBP19.35■□□□□ 0.69
CHMP4A-204ENST00000530996 IDH1O75874 414 aaKnown RBP19.34■□□□□ 0.69
CHMP4A-204ENST00000530996 CYP2E1P05181 493 aaPredicted RBP19.34■□□□□ 0.69
CHMP4A-204ENST00000530996 UBE2Q1Q7Z7E8 422 aa19.34■□□□□ 0.69
CHMP4A-204ENST00000530996 SSH3Q8TE77 659 aa19.34■□□□□ 0.69
CHMP4A-204ENST00000530996 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.34■□□□□ 0.69
CHMP4A-204ENST00000530996 PIH1D3Q9NQM4 214 aaKnown RBP19.34■□□□□ 0.69
CHMP4A-204ENST00000530996 PALD1Q9ULE6 856 aa19.34■□□□□ 0.69
CHMP4A-204ENST00000530996 MGAMO43451 1857 aa19.34■□□□□ 0.69
CHMP4A-204ENST00000530996 EVI5O60447 810 aa19.33■□□□□ 0.68
CHMP4A-204ENST00000530996 HMGCRP04035 888 aa19.33■□□□□ 0.68
CHMP4A-204ENST00000530996 CYP7A1P22680 504 aa19.33■□□□□ 0.68
CHMP4A-204ENST00000530996 ATP8B2P98198 1209 aa19.33■□□□□ 0.68
CHMP4A-204ENST00000530996 DBNLQ9UJU6 430 aaKnown RBP19.33■□□□□ 0.68
CHMP4A-204ENST00000530996 BACE1P56817 501 aa19.32■□□□□ 0.68
CHMP4A-204ENST00000530996 SH3D19Q5HYK7 790 aa19.32■□□□□ 0.68
CHMP4A-204ENST00000530996 CCAR1Q8IX12 1150 aaKnown RBP19.32■□□□□ 0.68
CHMP4A-204ENST00000530996 MIGA1Q8NAN2 632 aa19.32■□□□□ 0.68
CHMP4A-204ENST00000530996 CCDC8Q9H0W5 538 aaPredicted RBP19.32■□□□□ 0.68
CHMP4A-204ENST00000530996 DNAJC18Q9H819 358 aa19.32■□□□□ 0.68
CHMP4A-204ENST00000530996 CWC22Q9HCG8 908 aaKnown RBP19.32■□□□□ 0.68
CHMP4A-204ENST00000530996 RBM27Q9P2N5 1060 aaKnown RBP19.32■□□□□ 0.68
CHMP4A-204ENST00000530996 ZBTB21Q9ULJ3 1066 aa19.32■□□□□ 0.68
CHMP4A-204ENST00000530996 ATAD5Q96QE3 1844 aa19.32■□□□□ 0.68
CHMP4A-204ENST00000530996 USP5P45974 858 aa19.31■□□□□ 0.68
CHMP4A-204ENST00000530996 DYNLL1P63167 89 aaKnown RBP19.31■□□□□ 0.68
CHMP4A-204ENST00000530996 SHROOM1Q2M3G4 852 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms