RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 MYH1P12882 1939 aa22.66■■□□□ 1.22
GMDS-208ENST00000530927 CASP8AP2Q9UKL3 1982 aa22.66■■□□□ 1.22
GMDS-208ENST00000530927 DDX60LQ5H9U9 1706 aaKnown RBP22.66■■□□□ 1.22
GMDS-208ENST00000530927 MBD4O95243 580 aa22.65■■□□□ 1.22
GMDS-208ENST00000530927 NOL9Q5SY16 702 aaKnown RBP22.65■■□□□ 1.22
GMDS-208ENST00000530927 REM2Q8IYK8 340 aaPredicted RBP22.65■■□□□ 1.22
GMDS-208ENST00000530927 TTC41PQ6P2S7 1318 aa22.65■■□□□ 1.22
GMDS-208ENST00000530927 DOCK1Q14185 1865 aa22.65■■□□□ 1.22
GMDS-208ENST00000530927 NAV1Q8NEY1 1877 aa22.65■■□□□ 1.22
GMDS-208ENST00000530927 PRKAB2O43741 272 aa22.65■■□□□ 1.22
GMDS-208ENST00000530927 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.65■■□□□ 1.22
GMDS-208ENST00000530927 PUS7LQ9H0K6 701 aaKnown RBP22.65■■□□□ 1.22
GMDS-208ENST00000530927 CCL15-CCL14A0A0B4J2E2 113 aa22.64■■□□□ 1.21
GMDS-208ENST00000530927 TBC1D12O60347 775 aa22.64■■□□□ 1.21
GMDS-208ENST00000530927 PPIL2Q13356 520 aa22.64■■□□□ 1.21
GMDS-208ENST00000530927 CCL15Q16663 113 aa22.64■■□□□ 1.21
GMDS-208ENST00000530927 SCYL3Q8IZE3 742 aa22.64■■□□□ 1.21
GMDS-208ENST00000530927 KBTBD3Q8NAB2 608 aa22.64■■□□□ 1.21
GMDS-208ENST00000530927 PI4KBQ9UBF8 816 aa22.64■■□□□ 1.21
GMDS-208ENST00000530927 ATAD5Q96QE3 1844 aa22.63■■□□□ 1.21
GMDS-208ENST00000530927 TESPA1A2RU30 521 aaPredicted RBP22.63■■□□□ 1.21
GMDS-208ENST00000530927 JAG1P78504 1218 aa22.63■■□□□ 1.21
GMDS-208ENST00000530927 ZBTB47Q9UFB7 747 aaPredicted RBP22.63■■□□□ 1.21
GMDS-208ENST00000530927 PHIPQ8WWQ0 1821 aa22.62■■□□□ 1.21
GMDS-208ENST00000530927 GLRX3O76003 335 aaKnown RBP22.62■■□□□ 1.21
GMDS-208ENST00000530927 GTF2A2P52657 109 aa22.62■■□□□ 1.21
GMDS-208ENST00000530927 PPATQ06203 517 aa22.62■■□□□ 1.21
GMDS-208ENST00000530927 UBE3CQ15386 1083 aa22.62■■□□□ 1.21
GMDS-208ENST00000530927 DHX36Q9H2U1 1008 aaKnown RBP22.62■■□□□ 1.21
GMDS-208ENST00000530927 SMIM22K7EJ46 135 aa22.61■■□□□ 1.21
GMDS-208ENST00000530927 CYP2D6P10635 497 aa22.61■■□□□ 1.21
GMDS-208ENST00000530927 PTPRAP18433 802 aa22.61■■□□□ 1.21
GMDS-208ENST00000530927 PLCD1P51178 756 aa22.61■■□□□ 1.21
GMDS-208ENST00000530927 PDE1AP54750 535 aa22.61■■□□□ 1.21
GMDS-208ENST00000530927 TMED8Q6PL24 325 aaPredicted RBP22.61■■□□□ 1.21
GMDS-208ENST00000530927 FAM43AQ8N2R8 423 aa22.61■■□□□ 1.21
GMDS-208ENST00000530927 CRNKL1Q9BZJ0 848 aaKnown RBP22.61■■□□□ 1.21
GMDS-208ENST00000530927 ZHX2Q9Y6X8 837 aa22.61■■□□□ 1.21
GMDS-208ENST00000530927 ERC2O15083 957 aa22.6■■□□□ 1.21
GMDS-208ENST00000530927 CTNND1O60716 968 aaKnown RBP22.6■■□□□ 1.21
GMDS-208ENST00000530927 INHBEP58166 350 aa22.6■■□□□ 1.21
GMDS-208ENST00000530927 CRACR2BQ8N4Y2 399 aaPredicted RBP22.6■■□□□ 1.21
GMDS-208ENST00000530927 OSBP2Q969R2 916 aa22.6■■□□□ 1.21
GMDS-208ENST00000530927 PICK1Q9NRD5 415 aa22.6■■□□□ 1.21
GMDS-208ENST00000530927 GDF11O95390 407 aa22.59■■□□□ 1.21
GMDS-208ENST00000530927 NUCB1Q02818 461 aa22.59■■□□□ 1.21
GMDS-208ENST00000530927 METTL16Q86W50 562 aaKnown RBP22.59■■□□□ 1.21
GMDS-208ENST00000530927 CHD1LQ86WJ1 897 aa22.59■■□□□ 1.21
GMDS-208ENST00000530927 CERS3Q8IU89 383 aa22.59■■□□□ 1.21
GMDS-208ENST00000530927 TNS4Q8IZW8 715 aa22.59■■□□□ 1.21
GMDS-208ENST00000530927 DCP1AQ9NPI6 582 aaPredicted RBP22.59■■□□□ 1.21
GMDS-208ENST00000530927 STAP2Q9UGK3 403 aa22.59■■□□□ 1.21
GMDS-208ENST00000530927 HERC5Q9UII4 1024 aaKnown RBP22.59■■□□□ 1.21
GMDS-208ENST00000530927 BAZ2AQ9UIF9 1905 aaKnown RBP22.58■■□□□ 1.21
GMDS-208ENST00000530927 BTBD19C9JJ37 291 aa22.58■■□□□ 1.21
GMDS-208ENST00000530927 RNF113AO15541 343 aaKnown RBP22.58■■□□□ 1.21
GMDS-208ENST00000530927 CRHR2Q13324 411 aa22.58■■□□□ 1.21
GMDS-208ENST00000530927 SNAPC2Q13487 334 aa22.58■■□□□ 1.21
GMDS-208ENST00000530927 MOGSQ13724 837 aa22.58■■□□□ 1.21
GMDS-208ENST00000530927 SEC62Q99442 399 aaKnown RBP22.58■■□□□ 1.21
GMDS-208ENST00000530927 KCNH4Q9UQ05 1017 aa22.58■■□□□ 1.21
GMDS-208ENST00000530927 CYP2D7A0A087X1C5 515 aa22.57■■□□□ 1.2
GMDS-208ENST00000530927 M0R2C6 588 aa22.57■■□□□ 1.2
GMDS-208ENST00000530927 HLA-DOAP06340 250 aa22.57■■□□□ 1.2
GMDS-208ENST00000530927 CETPP11597 493 aa22.57■■□□□ 1.2
GMDS-208ENST00000530927 CAP2P40123 477 aa22.57■■□□□ 1.2
GMDS-208ENST00000530927 DGKZQ13574 1117 aa22.57■■□□□ 1.2
GMDS-208ENST00000530927 ZSCAN25Q6NSZ9 544 aa22.57■■□□□ 1.2
GMDS-208ENST00000530927 ZNF296Q8WUU4 475 aaPredicted RBP22.57■■□□□ 1.2
GMDS-208ENST00000530927 FSD1Q9BTV5 496 aa22.57■■□□□ 1.2
GMDS-208ENST00000530927 MCM9Q9NXL9 1143 aa22.57■■□□□ 1.2
GMDS-208ENST00000530927 AFG3L2Q9Y4W6 797 aa22.57■■□□□ 1.2
GMDS-208ENST00000530927 TRIM75PA6NK02 468 aa22.57■■□□□ 1.2
GMDS-208ENST00000530927 POLR3DP05423 398 aaPredicted RBP22.57■■□□□ 1.2
GMDS-208ENST00000530927 FOXP4Q8IVH2 680 aaPredicted RBP22.57■■□□□ 1.2
GMDS-208ENST00000530927 GPR25O00155 361 aa22.56■■□□□ 1.2
GMDS-208ENST00000530927 APPBP2Q92624 585 aa22.56■■□□□ 1.2
GMDS-208ENST00000530927 TRIM34Q9BYJ4 488 aa22.56■■□□□ 1.2
GMDS-208ENST00000530927 SLC4A4Q9Y6R1 1079 aa22.56■■□□□ 1.2
GMDS-208ENST00000530927 PTPRFP10586 1907 aa22.56■■□□□ 1.2
GMDS-208ENST00000530927 ALDH1A1P00352 501 aa22.55■■□□□ 1.2
GMDS-208ENST00000530927 PLEKHM2Q8IWE5 1019 aa22.55■■□□□ 1.2
GMDS-208ENST00000530927 SLC44A5Q8NCS7 719 aa22.55■■□□□ 1.2
GMDS-208ENST00000530927 STRBPQ96SI9 672 aaKnown RBP22.55■■□□□ 1.2
GMDS-208ENST00000530927 CFHR5Q9BXR6 569 aa22.55■■□□□ 1.2
GMDS-208ENST00000530927 SERPINB13Q9UIV8 391 aa22.55■■□□□ 1.2
GMDS-208ENST00000530927 TAF1CQ15572 869 aaPredicted RBP22.54■■□□□ 1.2
GMDS-208ENST00000530927 DYNLL2Q96FJ2 89 aa22.54■■□□□ 1.2
GMDS-208ENST00000530927 A0A0G2JLL6 359 aaPredicted RBP22.53■■□□□ 1.2
GMDS-208ENST00000530927 PDE4AP27815 886 aa22.53■■□□□ 1.2
GMDS-208ENST00000530927 SHMT1P34896 483 aa22.53■■□□□ 1.2
GMDS-208ENST00000530927 CAP1Q01518 475 aa22.53■■□□□ 1.2
GMDS-208ENST00000530927 OTUD7BQ6GQQ9 843 aa22.53■■□□□ 1.2
GMDS-208ENST00000530927 GPAT2Q6NUI2 795 aa22.53■■□□□ 1.2
GMDS-208ENST00000530927 PRRT2Q7Z6L0 340 aaPredicted RBP22.53■■□□□ 1.2
GMDS-208ENST00000530927 TTC6Q86TZ1 520 aa22.53■■□□□ 1.2
GMDS-208ENST00000530927 EHD4Q9H223 541 aa22.53■■□□□ 1.2
GMDS-208ENST00000530927 CXCL11O14625 94 aa22.52■■□□□ 1.2
GMDS-208ENST00000530927 GPAA1O43292 621 aa22.52■■□□□ 1.2
GMDS-208ENST00000530927 GABPAQ06546 454 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms