RNA–Protein interactions for RNA: ENST00000530818.1

PTPN11-203, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-203ENST00000530818 RAB6AP20340 208 aa4.41□□□□□ -1.7
PTPN11-203ENST00000530818 RPL6Q02878 288 aaKnown RBP4.41□□□□□ -1.7
PTPN11-203ENST00000530818 SLBPQ14493 270 aaKnown RBP eCLIP4.41□□□□□ -1.7
PTPN11-203ENST00000530818 RNF43Q68DV7 783 aa4.41□□□□□ -1.7
PTPN11-203ENST00000530818 FAM214BQ7L5A3 538 aa4.41□□□□□ -1.7
PTPN11-203ENST00000530818 USP48Q86UV5 1035 aa4.41□□□□□ -1.7
PTPN11-203ENST00000530818 NT5DC4Q86YG4 428 aa4.41□□□□□ -1.7
PTPN11-203ENST00000530818 SMYD4Q8IYR2 804 aaPredicted RBP4.41□□□□□ -1.7
PTPN11-203ENST00000530818 WNT10AQ9GZT5 417 aa4.41□□□□□ -1.7
PTPN11-203ENST00000530818 ATXN3LQ9H3M9 355 aa4.41□□□□□ -1.7
PTPN11-203ENST00000530818 UPK3BL1B0FP48 263 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 UPK3BL2E5RIL1 263 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 K7ELQ4 463 aaPredicted RBP4.4□□□□□ -1.71
PTPN11-203ENST00000530818 FANCGO15287 622 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 TLR3O15455 904 aaKnown RBP4.4□□□□□ -1.71
PTPN11-203ENST00000530818 DNAJA2O60884 412 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 RNGTTO60942 597 aaKnown RBP4.4□□□□□ -1.71
PTPN11-203ENST00000530818 IGLV1-40P01703 118 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 RXRBP28702 533 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 GRK4P32298 578 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 ITGAEP38570 1179 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 NFIAQ12857 509 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 CDK5R2Q13319 367 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 PWP1Q13610 501 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 HDXQ7Z353 690 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 ZDHHC13Q8IUH4 622 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 RIN3Q8TB24 985 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 MFSD14AQ96MC6 490 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 NT5C1AQ9BXI3 368 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 TJP2Q9UDY2 1190 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 PCOLCE2Q9UKZ9 415 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 DAGLAQ9Y4D2 1042 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 U3KQE9 123 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 PRR36Q9H6K5 1346 aa4.4□□□□□ -1.71
PTPN11-203ENST00000530818 CCDC180Q9P1Z9 1646 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 PRAMEF27A3QJZ7 478 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 FAM170BA6NMN3 283 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 GRIN3BO60391 1043 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 LEFTY1O75610 366 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 MED26O95402 600 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 TNNI2P48788 182 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 CLCQ05315 142 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 MPP2Q14168 576 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 REC114Q7Z4M0 266 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 ZAR1Q86SH2 424 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 SLITRK4Q8IW52 837 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 SHKBP1Q8TBC3 707 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 ELMO3Q96BJ8 720 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 ACSF2Q96CM8 615 aaPredicted RBP4.39□□□□□ -1.71
PTPN11-203ENST00000530818 LRRC3Q9BY71 257 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 ACBD3Q9H3P7 528 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 BRMS1Q9HCU9 246 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 SUPT16HQ9Y5B9 1047 aaKnown RBP4.39□□□□□ -1.71
PTPN11-203ENST00000530818 ROBO2Q9HCK4 1378 aa4.39□□□□□ -1.71
PTPN11-203ENST00000530818 E9PSI1 815 aa4.38□□□□□ -1.71
PTPN11-203ENST00000530818 TCF3P15923 654 aa4.38□□□□□ -1.71
PTPN11-203ENST00000530818 HOXA10P31260 410 aaPredicted RBP4.38□□□□□ -1.71
PTPN11-203ENST00000530818 MAP7Q14244 749 aa4.38□□□□□ -1.71
PTPN11-203ENST00000530818 SNAP47Q5SQN1 464 aa4.38□□□□□ -1.71
PTPN11-203ENST00000530818 OGFOD3Q6PK18 319 aa4.38□□□□□ -1.71
PTPN11-203ENST00000530818 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.38□□□□□ -1.71
PTPN11-203ENST00000530818 FBXL6Q8N531 539 aa4.38□□□□□ -1.71
PTPN11-203ENST00000530818 SPON2Q9BUD6 331 aa4.38□□□□□ -1.71
PTPN11-203ENST00000530818 PIDD1Q9HB75 910 aa4.38□□□□□ -1.71
PTPN11-203ENST00000530818 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.38□□□□□ -1.71
PTPN11-203ENST00000530818 TACC3Q9Y6A5 838 aa4.38□□□□□ -1.71
PTPN11-203ENST00000530818 COL17A1Q9UMD9 1497 aaPredicted RBP4.37□□□□□ -1.71
PTPN11-203ENST00000530818 WDR64B1ANS9 1081 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 CHURC1-FNTBB4DL54 471 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 SLITRK5O94991 958 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 ATE1O95260 518 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 EOMESO95936 686 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 TGFB1P01137 390 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 LMNB1P20700 586 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 CAP2P40123 477 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 PAK2Q13177 524 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 SEZ6Q53EL9 994 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 TMEM201Q5SNT2 666 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 PAOXQ6QHF9 649 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 ZNF765Q7L2R6 523 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 KIAA0825Q8IV33 1275 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 MCATQ8IVS2 390 aaKnown RBP4.37□□□□□ -1.71
PTPN11-203ENST00000530818 ZNF654Q8IZM8 581 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 ZNF507Q8TCN5 953 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 HEXIM2Q96MH2 286 aaKnown RBP4.37□□□□□ -1.71
PTPN11-203ENST00000530818 TBC1D32Q96NH3 1257 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 DBNDD2Q9BQY9 259 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 DUSP23Q9BVJ7 150 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 ANTXR1Q9H6X2 564 aa4.37□□□□□ -1.71
PTPN11-203ENST00000530818 SLC22A31A6NKX4 558 aa4.36□□□□□ -1.71
PTPN11-203ENST00000530818 PGRP06401 933 aa4.36□□□□□ -1.71
PTPN11-203ENST00000530818 ETF1P62495 437 aaKnown RBP4.36□□□□□ -1.71
PTPN11-203ENST00000530818 SLC51AQ86UW1 340 aa4.36□□□□□ -1.71
PTPN11-203ENST00000530818 HID1Q8IV36 788 aa4.36□□□□□ -1.71
PTPN11-203ENST00000530818 MRPL41Q8IXM3 137 aaKnown RBP4.36□□□□□ -1.71
PTPN11-203ENST00000530818 PPP1R13LQ8WUF5 828 aa4.36□□□□□ -1.71
PTPN11-203ENST00000530818 NKD1Q969G9 470 aa4.36□□□□□ -1.71
PTPN11-203ENST00000530818 TMEM87BQ96K49 555 aa4.36□□□□□ -1.71
PTPN11-203ENST00000530818 DPH2Q9BQC3 489 aaPredicted RBP4.36□□□□□ -1.71
PTPN11-203ENST00000530818 TGIF2Q9GZN2 237 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms