RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 CD68P34810 354 aaPredicted RBP11.95□□□□□ -0.5
CCDC90B-217ENST00000530253 MCTP1Q6DN14 999 aa11.95□□□□□ -0.5
CCDC90B-217ENST00000530253 SAP130Q9H0E3 1048 aa11.95□□□□□ -0.5
CCDC90B-217ENST00000530253 GGNBP2Q9H3C7 697 aa11.95□□□□□ -0.5
CCDC90B-217ENST00000530253 STOML1Q9UBI4 398 aa11.95□□□□□ -0.5
CCDC90B-217ENST00000530253 LMO7Q8WWI1 1683 aa11.94□□□□□ -0.5
CCDC90B-217ENST00000530253 IGLV1-40P01703 118 aa11.94□□□□□ -0.5
CCDC90B-217ENST00000530253 CDC27P30260 824 aa11.94□□□□□ -0.5
CCDC90B-217ENST00000530253 SCNN1AP37088 669 aa11.94□□□□□ -0.5
CCDC90B-217ENST00000530253 CD97P48960 835 aa11.94□□□□□ -0.5
CCDC90B-217ENST00000530253 CEP135Q66GS9 1140 aa11.94□□□□□ -0.5
CCDC90B-217ENST00000530253 AGGF1Q8N302 714 aaeCLIP11.94□□□□□ -0.5
CCDC90B-217ENST00000530253 SLIT2O94813 1529 aa11.93□□□□□ -0.5
CCDC90B-217ENST00000530253 GCP02774 474 aa11.93□□□□□ -0.5
CCDC90B-217ENST00000530253 RXRBP28702 533 aa11.93□□□□□ -0.5
CCDC90B-217ENST00000530253 SSTR4P31391 388 aa11.93□□□□□ -0.5
CCDC90B-217ENST00000530253 ZAP70P43403 619 aa11.93□□□□□ -0.5
CCDC90B-217ENST00000530253 KRTAP1-3Q8IUG1 177 aa11.93□□□□□ -0.5
CCDC90B-217ENST00000530253 KLHL23Q8NBE8 558 aa11.93□□□□□ -0.5
CCDC90B-217ENST00000530253 KRTAP4-12Q9BQ66 201 aa11.93□□□□□ -0.5
CCDC90B-217ENST00000530253 CXXC1Q9P0U4 656 aaPredicted RBP11.93□□□□□ -0.5
CCDC90B-217ENST00000530253 ZMIZ1Q9ULJ6 1067 aa11.93□□□□□ -0.5
CCDC90B-217ENST00000530253 PLCH1Q4KWH8 1693 aa11.93□□□□□ -0.5
CCDC90B-217ENST00000530253 KIAA0232Q92628 1395 aa11.92□□□□□ -0.5
CCDC90B-217ENST00000530253 COL18A1P39060 1754 aa11.92□□□□□ -0.5
CCDC90B-217ENST00000530253 COL14A1Q05707 1796 aaKnown RBP11.92□□□□□ -0.5
CCDC90B-217ENST00000530253 ABCC6O95255 1503 aa11.92□□□□□ -0.5
CCDC90B-217ENST00000530253 LINC01387J3KSC0 135 aa11.92□□□□□ -0.5
CCDC90B-217ENST00000530253 ACAD11Q709F0 780 aa11.92□□□□□ -0.5
CCDC90B-217ENST00000530253 COG3Q96JB2 828 aa11.92□□□□□ -0.5
CCDC90B-217ENST00000530253 KNSTRNQ9Y448 316 aa11.92□□□□□ -0.5
CCDC90B-217ENST00000530253 NRAPQ86VF7 1730 aa11.91□□□□□ -0.5
CCDC90B-217ENST00000530253 TNFRSF10BO14763 440 aa11.91□□□□□ -0.5
CCDC90B-217ENST00000530253 COBLO75128 1261 aa11.91□□□□□ -0.5
CCDC90B-217ENST00000530253 DDX10Q13206 875 aaKnown RBP11.91□□□□□ -0.5
CCDC90B-217ENST00000530253 LACRTQ9GZZ8 138 aa11.91□□□□□ -0.5
CCDC90B-217ENST00000530253 ABI2Q9NYB9 513 aaPredicted RBP11.91□□□□□ -0.5
CCDC90B-217ENST00000530253 SMG6Q86US8 1419 aaKnown RBP11.91□□□□□ -0.5
CCDC90B-217ENST00000530253 PEAK1Q9H792 1746 aa11.91□□□□□ -0.5
CCDC90B-217ENST00000530253 AATKQ6ZMQ8 1374 aa11.91□□□□□ -0.5
CCDC90B-217ENST00000530253 KIF4AO95239 1232 aa11.9□□□□□ -0.5
CCDC90B-217ENST00000530253 ATP11AP98196 1134 aa11.9□□□□□ -0.5
CCDC90B-217ENST00000530253 LCE3BQ5TA77 95 aa11.9□□□□□ -0.5
CCDC90B-217ENST00000530253 ARHGEF25Q86VW2 580 aa11.9□□□□□ -0.5
CCDC90B-217ENST00000530253 KCNH5Q8NCM2 988 aa11.9□□□□□ -0.5
CCDC90B-217ENST00000530253 GALNT11Q8NCW6 608 aa11.9□□□□□ -0.5
CCDC90B-217ENST00000530253 STIM2Q9P246 746 aa11.9□□□□□ -0.5
CCDC90B-217ENST00000530253 NWD2Q9ULI1 1742 aa11.9□□□□□ -0.5
CCDC90B-217ENST00000530253 CAMTA1Q9Y6Y1 1673 aa11.9□□□□□ -0.5
CCDC90B-217ENST00000530253 LTN1O94822 1766 aa11.9□□□□□ -0.51
CCDC90B-217ENST00000530253 EP400Q96L91 3159 aa11.89□□□□□ -0.51
CCDC90B-217ENST00000530253 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-217ENST00000530253 FAM83GA6ND36 823 aa11.89□□□□□ -0.51
CCDC90B-217ENST00000530253 PAX4O43316 350 aa11.89□□□□□ -0.51
CCDC90B-217ENST00000530253 FBLN1P23142 703 aa11.89□□□□□ -0.51
CCDC90B-217ENST00000530253 ZC3H6P61129 1189 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-217ENST00000530253 UTP4Q969X6 686 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-217ENST00000530253 UBL7Q96S82 380 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-217ENST00000530253 MKNK1Q9BUB5 465 aa11.89□□□□□ -0.51
CCDC90B-217ENST00000530253 BCL9LQ86UU0 1499 aa11.89□□□□□ -0.51
CCDC90B-217ENST00000530253 MAP3K19Q56UN5 1328 aa11.88□□□□□ -0.51
CCDC90B-217ENST00000530253 RGS12O14924 1447 aa11.88□□□□□ -0.51
CCDC90B-217ENST00000530253 PTPRAP18433 802 aa11.88□□□□□ -0.51
CCDC90B-217ENST00000530253 GRIK1P39086 918 aa11.88□□□□□ -0.51
CCDC90B-217ENST00000530253 STK32AQ8WU08 396 aa11.88□□□□□ -0.51
CCDC90B-217ENST00000530253 KIAA1324LA8MWY0 1029 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 FSCN2O14926 492 aa11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 RPLP1P05386 114 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 RBM6P78332 1123 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 CHRNA2Q15822 529 aa11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 COL13A1Q5TAT6 717 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 PDE12Q6L8Q7 609 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 NCAPG2Q86XI2 1143 aa11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 GPR152Q8TDT2 470 aa11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 PBX4Q9BYU1 374 aa11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 RASSF4Q9H2L5 321 aa11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 PRDM11Q9NQV5 511 aa11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 RTL1A6NKG5 1358 aa11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 PARD3Q8TEW0 1356 aa11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 COL5A2P05997 1499 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-217ENST00000530253 DUOXA2Q1HG44 320 aa11.86□□□□□ -0.51
CCDC90B-217ENST00000530253 CC2D1BQ5T0F9 858 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-217ENST00000530253 INTS5Q6P9B9 1019 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-217ENST00000530253 TXNDC11Q6PKC3 985 aa11.86□□□□□ -0.51
CCDC90B-217ENST00000530253 GOLGA2P5Q9HBQ8 144 aa11.86□□□□□ -0.51
CCDC90B-217ENST00000530253 KIF24Q5T7B8 1368 aa11.86□□□□□ -0.51
CCDC90B-217ENST00000530253 ATRNO75882 1429 aa11.86□□□□□ -0.51
CCDC90B-217ENST00000530253 ATG7O95352 703 aa11.85□□□□□ -0.51
CCDC90B-217ENST00000530253 WISP1O95388 367 aa11.85□□□□□ -0.51
CCDC90B-217ENST00000530253 IRAK1P51617 712 aa11.85□□□□□ -0.51
CCDC90B-217ENST00000530253 CABP4P57796 275 aa11.85□□□□□ -0.51
CCDC90B-217ENST00000530253 NFIAQ12857 509 aa11.85□□□□□ -0.51
CCDC90B-217ENST00000530253 NAA30Q147X3 362 aaPredicted RBP11.85□□□□□ -0.51
CCDC90B-217ENST00000530253 RRS1Q15050 365 aaKnown RBP11.85□□□□□ -0.51
CCDC90B-217ENST00000530253 MORC1Q86VD1 984 aa11.85□□□□□ -0.51
CCDC90B-217ENST00000530253 WNT8BQ93098 351 aa11.85□□□□□ -0.51
CCDC90B-217ENST00000530253 BLMP54132 1417 aaPredicted RBP11.85□□□□□ -0.51
CCDC90B-217ENST00000530253 CDK12Q9NYV4 1490 aaPredicted RBP11.84□□□□□ -0.51
CCDC90B-217ENST00000530253 FAM26DQ5JW98 314 aa11.84□□□□□ -0.51
CCDC90B-217ENST00000530253 ARMC10Q8N2F6 343 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms