RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 GABPAQ06546 454 aa13.62□□□□□ -0.23
CAPN1-217ENST00000529133 FMR1Q06787 632 aaKnown RBP eCLIP13.62□□□□□ -0.231e-6■□□□□ 10.5
CAPN1-217ENST00000529133 SUPT20HL1Q3ZLR7 823 aa13.62□□□□□ -0.23
CAPN1-217ENST00000529133 CREB3L3Q68CJ9 461 aa13.62□□□□□ -0.23
CAPN1-217ENST00000529133 METTL16Q86W50 562 aaKnown RBP13.62□□□□□ -0.23
CAPN1-217ENST00000529133 TBC1D10CQ8IV04 446 aa13.62□□□□□ -0.23
CAPN1-217ENST00000529133 SMC1BQ8NDV3 1235 aa13.62□□□□□ -0.23
CAPN1-217ENST00000529133 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
CAPN1-217ENST00000529133 DYNLL2Q96FJ2 89 aa13.62□□□□□ -0.23
CAPN1-217ENST00000529133 DNAJC18Q9H819 358 aa13.62□□□□□ -0.23
CAPN1-217ENST00000529133 SERPINB13Q9UIV8 391 aa13.62□□□□□ -0.23
CAPN1-217ENST00000529133 LAMA4Q16363 1823 aa13.62□□□□□ -0.23
CAPN1-217ENST00000529133 MYH1P12882 1939 aa13.61□□□□□ -0.23
CAPN1-217ENST00000529133 BAZ2AQ9UIF9 1905 aaKnown RBP13.61□□□□□ -0.23
CAPN1-217ENST00000529133 ZNF213O14771 459 aa13.61□□□□□ -0.23
CAPN1-217ENST00000529133 TOMM70O94826 608 aa13.61□□□□□ -0.23
CAPN1-217ENST00000529133 ITGBL1O95965 494 aaPredicted RBP13.61□□□□□ -0.23
CAPN1-217ENST00000529133 CYP21A2P08686 494 aa13.61□□□□□ -0.23
CAPN1-217ENST00000529133 HSPA4P34932 840 aa13.61□□□□□ -0.23
CAPN1-217ENST00000529133 C16orf86Q6ZW13 317 aa13.61□□□□□ -0.23
CAPN1-217ENST00000529133 FOXP4Q8IVH2 680 aaPredicted RBP13.61□□□□□ -0.23
CAPN1-217ENST00000529133 STK11IPQ8N1F8 1099 aa13.61□□□□□ -0.23
CAPN1-217ENST00000529133 CRACR2BQ8N4Y2 399 aaPredicted RBP13.61□□□□□ -0.23
CAPN1-217ENST00000529133 SLC44A5Q8NCS7 719 aa13.61□□□□□ -0.23
CAPN1-217ENST00000529133 HOOK2Q96ED9 719 aa13.61□□□□□ -0.23
CAPN1-217ENST00000529133 TACC3Q9Y6A5 838 aa13.61□□□□□ -0.23
CAPN1-217ENST00000529133 TAF6LQ9Y6J9 622 aa13.61□□□□□ -0.23
CAPN1-217ENST00000529133 TBC1D12O60347 775 aa13.6□□□□□ -0.23
CAPN1-217ENST00000529133 SLC3A2P08195 630 aaKnown RBP13.6□□□□□ -0.23
CAPN1-217ENST00000529133 SHMT1P34896 483 aa13.6□□□□□ -0.23
CAPN1-217ENST00000529133 MAP3K10Q02779 954 aa13.6□□□□□ -0.23
CAPN1-217ENST00000529133 RNF20Q5VTR2 975 aa13.6□□□□□ -0.23
CAPN1-217ENST00000529133 MIGA2Q7L4E1 593 aa13.6□□□□□ -0.23
CAPN1-217ENST00000529133 KCNB2Q92953 911 aa13.6□□□□□ -0.23
CAPN1-217ENST00000529133 TRIM34Q9BYJ4 488 aa13.6□□□□□ -0.23
CAPN1-217ENST00000529133 HERC5Q9UII4 1024 aaKnown RBP13.6□□□□□ -0.23
CAPN1-217ENST00000529133 TAOK2Q9UL54 1235 aa13.6□□□□□ -0.23
CAPN1-217ENST00000529133 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
CAPN1-217ENST00000529133 FGRP09769 529 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 MCCP23508 829 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 NF2P35240 595 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 CDK8P49336 464 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 AKNAD1Q5T1N1 836 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 DCAF15Q66K64 600 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 STOX1Q6ZVD7 989 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 STAG1Q8WVM7 1258 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 ZNF341Q9BYN7 854 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.59□□□□□ -0.23
CAPN1-217ENST00000529133 INCENPQ9NQS7 918 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 SWAP70Q9UH65 585 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 FZD1Q9UP38 647 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 NEDD4P46934 1319 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 PASKQ96RG2 1323 aa13.59□□□□□ -0.23
CAPN1-217ENST00000529133 PRDM1O75626 825 aa13.58□□□□□ -0.24
CAPN1-217ENST00000529133 PDE4BQ07343 736 aa13.58□□□□□ -0.24
CAPN1-217ENST00000529133 PRKG1Q13976 671 aa13.58□□□□□ -0.24
CAPN1-217ENST00000529133 TATDN1Q6P1N9 297 aa13.58□□□□□ -0.24
CAPN1-217ENST00000529133 RNF41Q9H4P4 317 aaPredicted RBP13.58□□□□□ -0.24
CAPN1-217ENST00000529133 ZNF408Q9H9D4 720 aa13.58□□□□□ -0.24
CAPN1-217ENST00000529133 SNX14Q9Y5W7 946 aa13.58□□□□□ -0.24
CAPN1-217ENST00000529133 PHF20L1A8MW92 1017 aa13.57□□□□□ -0.24
CAPN1-217ENST00000529133 E7EWF7 191 aa13.57□□□□□ -0.24
CAPN1-217ENST00000529133 ORC4O43929 436 aa13.57□□□□□ -0.24
CAPN1-217ENST00000529133 CELF2O95319 508 aaKnown RBP13.57□□□□□ -0.24
CAPN1-217ENST00000529133 PCP11498 1178 aaKnown RBP13.57□□□□□ -0.24
CAPN1-217ENST00000529133 RASA1P20936 1047 aa13.57□□□□□ -0.24
CAPN1-217ENST00000529133 FSTL1Q12841 308 aa13.57□□□□□ -0.24
CAPN1-217ENST00000529133 RRP1BQ14684 758 aaKnown RBP13.57□□□□□ -0.24
CAPN1-217ENST00000529133 TSGA10IPQ3SY00 556 aa13.57□□□□□ -0.24
CAPN1-217ENST00000529133 MFSD6Q6ZSS7 791 aa13.57□□□□□ -0.24
CAPN1-217ENST00000529133 UPF2Q9HAU5 1272 aaKnown RBP13.57□□□□□ -0.24
CAPN1-217ENST00000529133 ZNF112Q9UJU3 913 aa13.57□□□□□ -0.24
CAPN1-217ENST00000529133 PAPPA2Q9BXP8 1791 aa13.56□□□□□ -0.24
CAPN1-217ENST00000529133 PPP1R12BO60237 982 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-217ENST00000529133 USP2O75604 605 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-217ENST00000529133 ZKSCAN1P17029 563 aaPredicted RBP13.56□□□□□ -0.24
CAPN1-217ENST00000529133 RRP12Q5JTH9 1297 aaKnown RBP13.56□□□□□ -0.24
CAPN1-217ENST00000529133 MOB2Q70IA6 237 aa13.56□□□□□ -0.24
CAPN1-217ENST00000529133 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.56□□□□□ -0.24
CAPN1-217ENST00000529133 NKX2-3Q8TAU0 364 aa13.56□□□□□ -0.24
CAPN1-217ENST00000529133 KLRG1Q96E93 195 aa13.56□□□□□ -0.24
CAPN1-217ENST00000529133 WRNIP1Q96S55 665 aa13.56□□□□□ -0.24
CAPN1-217ENST00000529133 C22orf23Q9BZE7 217 aa13.56□□□□□ -0.24
CAPN1-217ENST00000529133 MKNK2Q9HBH9 465 aa13.56□□□□□ -0.24
CAPN1-217ENST00000529133 ZNF287Q9HBT7 754 aa13.56□□□□□ -0.24
CAPN1-217ENST00000529133 TOMM22Q9NS69 142 aa13.56□□□□□ -0.24
CAPN1-217ENST00000529133 ANGEL1Q9UNK9 670 aaKnown RBP13.56□□□□□ -0.24
CAPN1-217ENST00000529133 POLR2AP24928 1970 aaKnown RBP13.56□□□□□ -0.24
CAPN1-217ENST00000529133 B4E1Z4 1266 aa13.55□□□□□ -0.24
CAPN1-217ENST00000529133 GDF11O95390 407 aa13.55□□□□□ -0.24
CAPN1-217ENST00000529133 AKR1B1P15121 316 aa13.55□□□□□ -0.24
CAPN1-217ENST00000529133 INPP5BP32019 993 aa13.55□□□□□ -0.24
CAPN1-217ENST00000529133 RBM25P49756 843 aaKnown RBP13.55□□□□□ -0.24
CAPN1-217ENST00000529133 ANAPC15P60006 121 aa13.55□□□□□ -0.24
CAPN1-217ENST00000529133 JAG1P78504 1218 aa13.55□□□□□ -0.24
CAPN1-217ENST00000529133 TTLL12Q14166 644 aaPredicted RBP13.55□□□□□ -0.24
CAPN1-217ENST00000529133 KRT32Q14532 448 aa13.55□□□□□ -0.24
CAPN1-217ENST00000529133 MAP3K11Q16584 847 aa13.55□□□□□ -0.24
CAPN1-217ENST00000529133 SHROOM1Q2M3G4 852 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms