RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 RXRBP28702 533 aa7.74□□□□□ -1.17
CD44-230ENST00000528922 TNNI2P48788 182 aa7.74□□□□□ -1.17
CD44-230ENST00000528922 PAK2Q13177 524 aa7.74□□□□□ -1.17
CD44-230ENST00000528922 MPP2Q14168 576 aa7.74□□□□□ -1.17
CD44-230ENST00000528922 BEND4Q6ZU67 534 aa7.74□□□□□ -1.17
CD44-230ENST00000528922 SMYD4Q8IYR2 804 aaPredicted RBP7.74□□□□□ -1.17
CD44-230ENST00000528922 LRRC3Q9BY71 257 aa7.74□□□□□ -1.17
CD44-230ENST00000528922 KCNF1Q9H3M0 494 aa7.74□□□□□ -1.17
CD44-230ENST00000528922 RAXQ9Y2V3 346 aa7.74□□□□□ -1.17
CD44-230ENST00000528922 POLR3KQ9Y2Y1 108 aaPredicted RBP7.74□□□□□ -1.17
CD44-230ENST00000528922 CORINQ9Y5Q5 1042 aa7.74□□□□□ -1.17
CD44-230ENST00000528922 ROBO2Q9HCK4 1378 aa7.74□□□□□ -1.17
CD44-230ENST00000528922 HMX2A2RU54 273 aa7.73□□□□□ -1.17
CD44-230ENST00000528922 DYNC1LI2O43237 492 aaPredicted RBP7.73□□□□□ -1.17
CD44-230ENST00000528922 RNGTTO60942 597 aaKnown RBP7.73□□□□□ -1.17
CD44-230ENST00000528922 REC114Q7Z4M0 266 aa7.73□□□□□ -1.17
CD44-230ENST00000528922 CLEC10AQ8IUN9 316 aa7.73□□□□□ -1.17
CD44-230ENST00000528922 FAM83CQ9BQN1 747 aa7.73□□□□□ -1.17
CD44-230ENST00000528922 WNT10AQ9GZT5 417 aa7.73□□□□□ -1.17
CD44-230ENST00000528922 C7orf69Q9H7B7 122 aa7.73□□□□□ -1.17
CD44-230ENST00000528922 CCSER2Q9H7U1 834 aa7.73□□□□□ -1.17
CD44-230ENST00000528922 LGR6Q9HBX8 967 aa7.73□□□□□ -1.17
CD44-230ENST00000528922 PICK1Q9NRD5 415 aa7.73□□□□□ -1.17
CD44-230ENST00000528922 STOML1Q9UBI4 398 aa7.73□□□□□ -1.17
CD44-230ENST00000528922 DAGLAQ9Y4D2 1042 aa7.73□□□□□ -1.17
CD44-230ENST00000528922 FAM95CA0A1B0GW59 222 aa7.72□□□□□ -1.17
CD44-230ENST00000528922 FURINP09958 794 aa7.72□□□□□ -1.17
CD44-230ENST00000528922 H2AFB1P0C5Y9 115 aa7.72□□□□□ -1.17
CD44-230ENST00000528922 H2AFB2P0C5Z0 115 aa7.72□□□□□ -1.17
CD44-230ENST00000528922 GRK4P32298 578 aa7.72□□□□□ -1.17
CD44-230ENST00000528922 APOBRQ0VD83 1088 aa7.72□□□□□ -1.17
CD44-230ENST00000528922 SEZ6Q53EL9 994 aa7.72□□□□□ -1.17
CD44-230ENST00000528922 SEZ6L2Q6UXD5 910 aa7.72□□□□□ -1.17
CD44-230ENST00000528922 BRMS1Q9HCU9 246 aa7.72□□□□□ -1.17
CD44-230ENST00000528922 TACC3Q9Y6A5 838 aa7.72□□□□□ -1.17
CD44-230ENST00000528922 GRIN3BO60391 1043 aa7.71□□□□□ -1.18
CD44-230ENST00000528922 NFKBIBQ15653 356 aa7.71□□□□□ -1.18
CD44-230ENST00000528922 CWF19L2Q2TBE0 894 aaKnown RBP7.71□□□□□ -1.18
CD44-230ENST00000528922 DIEXFQ68CQ4 756 aaKnown RBP7.71□□□□□ -1.18
CD44-230ENST00000528922 SLITRK4Q8IW52 837 aa7.71□□□□□ -1.18
CD44-230ENST00000528922 NKD1Q969G9 470 aa7.71□□□□□ -1.18
CD44-230ENST00000528922 YIPF2Q9BWQ6 316 aa7.71□□□□□ -1.18
CD44-230ENST00000528922 FBRSQ9HAH7 460 aa7.71□□□□□ -1.18
CD44-230ENST00000528922 PCOLCE2Q9UKZ9 415 aa7.71□□□□□ -1.18
CD44-230ENST00000528922 GJA8P48165 433 aa7.7□□□□□ -1.18
CD44-230ENST00000528922 ETF1P62495 437 aaKnown RBP7.7□□□□□ -1.18
CD44-230ENST00000528922 MAP7Q14244 749 aa7.7□□□□□ -1.18
CD44-230ENST00000528922 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.7□□□□□ -1.18
CD44-230ENST00000528922 ZNF507Q8TCN5 953 aa7.7□□□□□ -1.18
CD44-230ENST00000528922 SSU72Q9NP77 194 aaKnown RBP7.7□□□□□ -1.18
CD44-230ENST00000528922 C1GALT1Q9NS00 363 aa7.7□□□□□ -1.18
CD44-230ENST00000528922 PRR36Q9H6K5 1346 aa7.69□□□□□ -1.18
CD44-230ENST00000528922 DYRK3O43781 588 aa7.69□□□□□ -1.18
CD44-230ENST00000528922 NKG7Q16617 165 aa7.69□□□□□ -1.18
CD44-230ENST00000528922 PAOXQ6QHF9 649 aa7.69□□□□□ -1.18
CD44-230ENST00000528922 SHISA5Q8N114 240 aa7.69□□□□□ -1.18
CD44-230ENST00000528922 GPRASP2Q96D09 838 aa7.69□□□□□ -1.18
CD44-230ENST00000528922 PRKAG2Q9UGJ0 569 aa7.69□□□□□ -1.18
CD44-230ENST00000528922 INPP5FQ9Y2H2 1132 aa7.69□□□□□ -1.18
CD44-230ENST00000528922 PGRP06401 933 aa7.68□□□□□ -1.18
CD44-230ENST00000528922 ADMP35318 185 aa7.68□□□□□ -1.18
CD44-230ENST00000528922 CLCQ05315 142 aa7.68□□□□□ -1.18
CD44-230ENST00000528922 SLBPQ14493 270 aaKnown RBP eCLIP7.68□□□□□ -1.18
CD44-230ENST00000528922 CDC37L1Q7L3B6 337 aa7.68□□□□□ -1.18
CD44-230ENST00000528922 RASGRP4Q8TDF6 673 aa7.68□□□□□ -1.18
CD44-230ENST00000528922 GATA6Q92908 595 aa7.68□□□□□ -1.18
CD44-230ENST00000528922 PSMG3-AS1Q96PY0 264 aa7.68□□□□□ -1.18
CD44-230ENST00000528922 CAPN10Q9HC96 672 aa7.68□□□□□ -1.18
CD44-230ENST00000528922 TJP2Q9UDY2 1190 aa7.68□□□□□ -1.18
CD44-230ENST00000528922 HTR3BO95264 441 aa7.67□□□□□ -1.18
CD44-230ENST00000528922 PLCG1P19174 1290 aa7.67□□□□□ -1.18
CD44-230ENST00000528922 MCM4P33991 863 aa7.67□□□□□ -1.18
CD44-230ENST00000528922 PDE4BQ07343 736 aa7.67□□□□□ -1.18
CD44-230ENST00000528922 RNF43Q68DV7 783 aa7.67□□□□□ -1.18
CD44-230ENST00000528922 HID1Q8IV36 788 aa7.67□□□□□ -1.18
CD44-230ENST00000528922 ACSF2Q96CM8 615 aaPredicted RBP7.67□□□□□ -1.18
CD44-230ENST00000528922 EHMT1Q9H9B1 1298 aa7.67□□□□□ -1.18
CD44-230ENST00000528922 GINM1Q9NU53 330 aa7.67□□□□□ -1.18
CD44-230ENST00000528922 REV1Q9UBZ9 1251 aa7.67□□□□□ -1.18
CD44-230ENST00000528922 PCDHB14Q9Y5E9 798 aa7.67□□□□□ -1.18
CD44-230ENST00000528922 ATE1O95260 518 aa7.66□□□□□ -1.18
CD44-230ENST00000528922 FSTP19883 344 aa7.66□□□□□ -1.18
CD44-230ENST00000528922 CDK5R2Q13319 367 aa7.66□□□□□ -1.18
CD44-230ENST00000528922 TMEM201Q5SNT2 666 aa7.66□□□□□ -1.18
CD44-230ENST00000528922 GK5Q6ZS86 529 aa7.66□□□□□ -1.18
CD44-230ENST00000528922 REXO1Q8N1G1 1221 aaKnown RBP7.66□□□□□ -1.18
CD44-230ENST00000528922 KCT2Q8NC54 265 aa7.66□□□□□ -1.18
CD44-230ENST00000528922 TINF2Q9BSI4 451 aa7.66□□□□□ -1.18
CD44-230ENST00000528922 SEMA6BQ9H3T3 888 aa7.66□□□□□ -1.18
CD44-230ENST00000528922 ADAM30Q9UKF2 790 aa7.66□□□□□ -1.18
CD44-230ENST00000528922 EFR3BQ9Y2G0 817 aa7.66□□□□□ -1.18
CD44-230ENST00000528922 UPK3BL1B0FP48 263 aa7.65□□□□□ -1.18
CD44-230ENST00000528922 UPK3BL2E5RIL1 263 aa7.65□□□□□ -1.18
CD44-230ENST00000528922 DNAJA2O60884 412 aa7.65□□□□□ -1.18
CD44-230ENST00000528922 CAP2P40123 477 aa7.65□□□□□ -1.18
CD44-230ENST00000528922 ZNF165P49910 485 aa7.65□□□□□ -1.18
CD44-230ENST00000528922 NFIAQ12857 509 aa7.65□□□□□ -1.18
CD44-230ENST00000528922 MRPL41Q8IXM3 137 aaKnown RBP7.65□□□□□ -1.18
CD44-230ENST00000528922 TMEM87BQ96K49 555 aa7.65□□□□□ -1.18
CD44-230ENST00000528922 MFSD14AQ96MC6 490 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms