RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	PALD1	Q9ULE6	856 aa		14.28	□□□□□ -0.12
PSMC3-205	ENST00000528362	ZNF532	Q9HCE3	1301 aa		14.27	□□□□□ -0.12
PSMC3-205	ENST00000528362	CXCL11	O14625	94 aa		14.27	□□□□□ -0.13
PSMC3-205	ENST00000528362	CCDC84	Q86UT8	332 aa	Predicted RBP	14.27	□□□□□ -0.13
PSMC3-205	ENST00000528362	METTL16	Q86W50	562 aa	Known RBP	14.27	□□□□□ -0.13
PSMC3-205	ENST00000528362	ZCCHC17	Q9NP64	241 aa	Known RBP	14.27	□□□□□ -0.13
PSMC3-205	ENST00000528362	ZHX2	Q9Y6X8	837 aa		14.27	□□□□□ -0.13
PSMC3-205	ENST00000528362	CASP8AP2	Q9UKL3	1982 aa		14.27	□□□□□ -0.13
PSMC3-205	ENST00000528362	LAMB1	P07942	1786 aa		14.27	□□□□□ -0.13
PSMC3-205	ENST00000528362	MAGEB6P1	A0A0J9YX57	407 aa		14.26	□□□□□ -0.13
PSMC3-205	ENST00000528362	SLFNL1	Q499Z3	407 aa		14.26	□□□□□ -0.13
PSMC3-205	ENST00000528362	TSHZ3	Q63HK5	1081 aa		14.26	□□□□□ -0.13
PSMC3-205	ENST00000528362	ANKRD23	Q86SG2	305 aa		14.26	□□□□□ -0.13
PSMC3-205	ENST00000528362	ZFYVE28	Q9HCC9	887 aa		14.26	□□□□□ -0.13
PSMC3-205	ENST00000528362	ECHDC1	Q9NTX5	307 aa		14.26	□□□□□ -0.13
PSMC3-205	ENST00000528362	AFG3L2	Q9Y4W6	797 aa		14.26	□□□□□ -0.13
PSMC3-205	ENST00000528362		A0A0G2JLL6	359 aa	Predicted RBP	14.25	□□□□□ -0.13
PSMC3-205	ENST00000528362	CCDC85C	A6NKD9	419 aa		14.25	□□□□□ -0.13
PSMC3-205	ENST00000528362	PDHX	O00330	501 aa		14.25	□□□□□ -0.13
PSMC3-205	ENST00000528362	CHGB	P05060	677 aa		14.25	□□□□□ -0.13
PSMC3-205	ENST00000528362	ADD2	P35612	726 aa		14.25	□□□□□ -0.13
PSMC3-205	ENST00000528362	CAP2	P40123	477 aa		14.25	□□□□□ -0.13
PSMC3-205	ENST00000528362	USP5	P45974	858 aa		14.25	□□□□□ -0.13
PSMC3-205	ENST00000528362	CAP1	Q01518	475 aa		14.25	□□□□□ -0.13
PSMC3-205	ENST00000528362	SLC4A8	Q2Y0W8	1093 aa		14.25	□□□□□ -0.13
PSMC3-205	ENST00000528362	GPAT2	Q6NUI2	795 aa		14.25	□□□□□ -0.13
PSMC3-205	ENST00000528362	PRRT2	Q7Z6L0	340 aa	Predicted RBP	14.25	□□□□□ -0.13
PSMC3-205	ENST00000528362	DOCK2	Q92608	1830 aa		14.25	□□□□□ -0.13
PSMC3-205	ENST00000528362	TRIM75P	A6NK02	468 aa		14.24	□□□□□ -0.13
PSMC3-205	ENST00000528362	TLR2	O60603	784 aa		14.24	□□□□□ -0.13
PSMC3-205	ENST00000528362	HLA-DOA	P06340	250 aa		14.24	□□□□□ -0.13
PSMC3-205	ENST00000528362	RGS19	P49795	217 aa		14.24	□□□□□ -0.13
PSMC3-205	ENST00000528362	JAG1	P78504	1218 aa		14.24	□□□□□ -0.13
PSMC3-205	ENST00000528362	SP3	Q02447	781 aa		14.24	□□□□□ -0.13
PSMC3-205	ENST00000528362	PKN2	Q16513	984 aa	Known RBP	14.24	□□□□□ -0.13
PSMC3-205	ENST00000528362	FOXP4	Q8IVH2	680 aa	Predicted RBP	14.24	□□□□□ -0.13
PSMC3-205	ENST00000528362	LCORL	Q8N3X6	602 aa		14.24	□□□□□ -0.13
PSMC3-205	ENST00000528362	CD99L2	Q8TCZ2	262 aa		14.24	□□□□□ -0.13
PSMC3-205	ENST00000528362	ERO1A	Q96HE7	468 aa		14.24	□□□□□ -0.13
PSMC3-205	ENST00000528362	ADGRA2	Q96PE1	1338 aa		14.23	□□□□□ -0.13
PSMC3-205	ENST00000528362	HDAC1	Q13547	482 aa	Predicted RBP	14.23	□□□□□ -0.13
PSMC3-205	ENST00000528362	SHROOM1	Q2M3G4	852 aa	Predicted RBP	14.23	□□□□□ -0.13
PSMC3-205	ENST00000528362	OTOP1	Q7RTM1	612 aa		14.23	□□□□□ -0.13
PSMC3-205	ENST00000528362	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	14.23	□□□□□ -0.13
PSMC3-205	ENST00000528362	OTUD7A	Q8TE49	926 aa	Predicted RBP	14.23	□□□□□ -0.13
PSMC3-205	ENST00000528362	GPATCH3	Q96I76	525 aa		14.23	□□□□□ -0.13
PSMC3-205	ENST00000528362	CRNKL1	Q9BZJ0	848 aa	Known RBP	14.23	□□□□□ -0.13
PSMC3-205	ENST00000528362	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	14.23	□□□□□ -0.13	1e-12	■■□□□ 13.5
PSMC3-205	ENST00000528362	HPS5	Q9UPZ3	1129 aa		14.23	□□□□□ -0.13
PSMC3-205	ENST00000528362	TRIM17	Q9Y577	477 aa		14.23	□□□□□ -0.13
PSMC3-205	ENST00000528362	MBD4	O95243	580 aa		14.22	□□□□□ -0.13
PSMC3-205	ENST00000528362	UBE3C	Q15386	1083 aa		14.22	□□□□□ -0.13
PSMC3-205	ENST00000528362	FBXO46	Q6PJ61	603 aa	Predicted RBP	14.22	□□□□□ -0.13
PSMC3-205	ENST00000528362	FASTKD5	Q7L8L6	764 aa	Known RBP	14.22	□□□□□ -0.13
PSMC3-205	ENST00000528362	TRIM34	Q9BYJ4	488 aa		14.22	□□□□□ -0.13
PSMC3-205	ENST00000528362	EHD4	Q9H223	541 aa		14.22	□□□□□ -0.13
PSMC3-205	ENST00000528362	ARMT1	Q9H993	441 aa		14.22	□□□□□ -0.13
PSMC3-205	ENST00000528362	USP17L5	A8MUK1	530 aa		14.21	□□□□□ -0.13
PSMC3-205	ENST00000528362	GDF11	O95390	407 aa		14.21	□□□□□ -0.13
PSMC3-205	ENST00000528362	PLCD1	P51178	756 aa		14.21	□□□□□ -0.13
PSMC3-205	ENST00000528362	EVX2	Q03828	476 aa		14.21	□□□□□ -0.13
PSMC3-205	ENST00000528362	SPP2	Q13103	211 aa		14.21	□□□□□ -0.13
PSMC3-205	ENST00000528362	C17orf99	Q6UX52	265 aa		14.21	□□□□□ -0.13
PSMC3-205	ENST00000528362	GADL1	Q6ZQY3	521 aa		14.21	□□□□□ -0.13
PSMC3-205	ENST00000528362	ZNF280C	Q8ND82	737 aa		14.21	□□□□□ -0.13
PSMC3-205	ENST00000528362	SDR42E1	Q8WUS8	393 aa		14.21	□□□□□ -0.13
PSMC3-205	ENST00000528362	PARK7	Q99497	189 aa	Known RBP	14.21	□□□□□ -0.13
PSMC3-205	ENST00000528362	DCP1A	Q9NPI6	582 aa	Predicted RBP	14.21	□□□□□ -0.13
PSMC3-205	ENST00000528362	SERPINB13	Q9UIV8	391 aa		14.21	□□□□□ -0.13
PSMC3-205	ENST00000528362	PRKAB2	O43741	272 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	ASNS	P08243	561 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	CYP2C8	P10632	490 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	AAMP	Q13685	434 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	TTC6	Q86TZ1	520 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	KBTBD3	Q8NAB2	608 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	EXOC6	Q8TAG9	804 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	PI4K2B	Q8TCG2	481 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	WDR18	Q9BV38	432 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	TBC1D2	Q9BYX2	928 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	ARHGAP39	Q9C0H5	1083 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	EFCC1	Q9HA90	598 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	MCM9	Q9NXL9	1143 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	CPA4	Q9UI42	421 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	ZBTB21	Q9ULJ3	1066 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	AGTPBP1	Q9UPW5	1226 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	SLC45A1	Q9Y2W3	748 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	MYO5A	Q9Y4I1	1855 aa	Known RBP	14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	SIPA1L1	O43166	1804 aa		14.2	□□□□□ -0.14
PSMC3-205	ENST00000528362	TTC41P	Q6P2S7	1318 aa		14.19	□□□□□ -0.14
PSMC3-205	ENST00000528362	SALL3	Q9BXA9	1300 aa		14.19	□□□□□ -0.14
PSMC3-205	ENST00000528362	MX1	P20591	662 aa		14.19	□□□□□ -0.14
PSMC3-205	ENST00000528362	HMGCS2	P54868	508 aa		14.19	□□□□□ -0.14
PSMC3-205	ENST00000528362	LACTB	P83111	547 aa	Predicted RBP	14.19	□□□□□ -0.14
PSMC3-205	ENST00000528362	MLLT1	Q03111	559 aa	Predicted RBP	14.19	□□□□□ -0.14
PSMC3-205	ENST00000528362	GABPA	Q06546	454 aa		14.19	□□□□□ -0.14
PSMC3-205	ENST00000528362	TREML2	Q5T2D2	321 aa		14.19	□□□□□ -0.14
PSMC3-205	ENST00000528362	ZSCAN25	Q6NSZ9	544 aa		14.19	□□□□□ -0.14
PSMC3-205	ENST00000528362	TATDN1	Q6P1N9	297 aa		14.19	□□□□□ -0.14
PSMC3-205	ENST00000528362	GCC1	Q96CN9	775 aa		14.19	□□□□□ -0.14
PSMC3-205	ENST00000528362	PUS7L	Q9H0K6	701 aa	Known RBP	14.19	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms