RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 WHAMMP3Q1A5X7 153 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 PPM1EQ8WY54 764 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 NAPGQ99747 312 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-214ENST00000528165 EYA2O00167 538 aa16.68■□□□□ 0.26
CAPN1-214ENST00000528165 ERCC5P28715 1186 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-214ENST00000528165 LRRC24Q50LG9 513 aa16.68■□□□□ 0.26
CAPN1-214ENST00000528165 HSP90AB3PQ58FF7 597 aa16.68■□□□□ 0.26
CAPN1-214ENST00000528165 SLC9C2Q5TAH2 1124 aa16.68■□□□□ 0.26
CAPN1-214ENST00000528165 LRRC31Q6UY01 552 aa16.68■□□□□ 0.26
CAPN1-214ENST00000528165 PACS2Q86VP3 889 aa16.68■□□□□ 0.26
CAPN1-214ENST00000528165 MICU3Q86XE3 530 aa16.68■□□□□ 0.26
CAPN1-214ENST00000528165 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.68■□□□□ 0.26
CAPN1-214ENST00000528165 TTF2Q9UNY4 1162 aaKnown RBP16.68■□□□□ 0.26
CAPN1-214ENST00000528165 NWD2Q9ULI1 1742 aa16.68■□□□□ 0.26
CAPN1-214ENST00000528165 SNRPA1P09661 255 aaKnown RBP16.68■□□□□ 0.26
CAPN1-214ENST00000528165 MED15Q96RN5 788 aa16.68■□□□□ 0.26
CAPN1-214ENST00000528165 YY1AP1Q9H869 796 aa16.68■□□□□ 0.26
CAPN1-214ENST00000528165 FAM204AQ9H8W3 233 aa16.68■□□□□ 0.26
CAPN1-214ENST00000528165 C4AP0C0L4 1744 aa16.68■□□□□ 0.26
CAPN1-214ENST00000528165 C4BP0C0L5 1744 aa16.68■□□□□ 0.26
CAPN1-214ENST00000528165 CYB5RLQ6IPT4 315 aa16.67■□□□□ 0.26
CAPN1-214ENST00000528165 STK11IPQ8N1F8 1099 aa16.67■□□□□ 0.26
CAPN1-214ENST00000528165 APPBP2Q92624 585 aa16.67■□□□□ 0.26
CAPN1-214ENST00000528165 JRKLQ9Y4A0 524 aa16.67■□□□□ 0.26
CAPN1-214ENST00000528165 SPEF2Q9C093 1822 aa16.67■□□□□ 0.26
CAPN1-214ENST00000528165 MFAP3LO75121 409 aa16.67■□□□□ 0.26
CAPN1-214ENST00000528165 TFRCP02786 760 aaKnown RBP16.67■□□□□ 0.26
CAPN1-214ENST00000528165 CORO7P57737 925 aa16.67■□□□□ 0.26
CAPN1-214ENST00000528165 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
CAPN1-214ENST00000528165 GRAMD1CQ8IYS0 662 aa16.67■□□□□ 0.26
CAPN1-214ENST00000528165 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
CAPN1-214ENST00000528165 CDC5LQ99459 802 aaKnown RBP16.67■□□□□ 0.26
CAPN1-214ENST00000528165 PUS7LQ9H0K6 701 aaKnown RBP16.67■□□□□ 0.26
CAPN1-214ENST00000528165 KANK3Q6NY19 840 aa16.66■□□□□ 0.26
CAPN1-214ENST00000528165 PLBD2Q8NHP8 589 aa16.66■□□□□ 0.26
CAPN1-214ENST00000528165 ZNF594Q96JF6 807 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-214ENST00000528165 LRRIQ3A6PVS8 624 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-214ENST00000528165 CNGA4Q8IV77 575 aa16.66■□□□□ 0.26
CAPN1-214ENST00000528165 NOSTRINQ8IVI9 506 aa16.66■□□□□ 0.26
CAPN1-214ENST00000528165 BRMS1Q9HCU9 246 aa16.66■□□□□ 0.26
CAPN1-214ENST00000528165 H7C1W4 665 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 SH2B2O14492 632 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-214ENST00000528165 GPAA1O43292 621 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 ZBTB43O43298 467 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 GCP02774 474 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 FILIP1LQ4L180 1135 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 NFXL1Q6ZNB6 911 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 CEP126Q9P2H0 1117 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 PTPREP23469 700 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 CASP14P31944 242 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 GRIN1Q05586 938 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 CTAGE1Q96RT6 745 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 SLIT3O75094 1523 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 UBN2Q6ZU65 1347 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 RNF40O75150 1001 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 PPFIA4O75335 1185 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 SAFBQ15424 915 aaKnown RBP eCLIP16.65■□□□□ 0.26
CAPN1-214ENST00000528165 SPATA1Q5VX52 437 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 KLHL10Q6JEL2 608 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 NOA1Q8NC60 698 aaKnown RBP16.65■□□□□ 0.26
CAPN1-214ENST00000528165 ACRBPQ8NEB7 543 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 AFAP1L1Q8TED9 768 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 CCDC51Q96ER9 411 aa16.65■□□□□ 0.26
CAPN1-214ENST00000528165 FBXO2Q9UK22 296 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-214ENST00000528165 PHRF1Q9P1Y6 1649 aaKnown RBP16.64■□□□□ 0.25
CAPN1-214ENST00000528165 GOLGA8AA7E2F4 631 aa16.64■□□□□ 0.25
CAPN1-214ENST00000528165 CEBPAP49715 358 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-214ENST00000528165 WDR93Q6P2C0 686 aa16.64■□□□□ 0.25
CAPN1-214ENST00000528165 CYB5R4Q7L1T6 521 aa16.64■□□□□ 0.25
CAPN1-214ENST00000528165 APTXQ7Z2E3 356 aaKnown RBP16.64■□□□□ 0.25
CAPN1-214ENST00000528165 CCDC148Q8NFR7 591 aa16.64■□□□□ 0.25
CAPN1-214ENST00000528165 CTCFLQ8NI51 663 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-214ENST00000528165 MYO1AQ9UBC5 1043 aa16.64■□□□□ 0.25
CAPN1-214ENST00000528165 ADD3Q9UEY8 706 aaKnown RBP16.64■□□□□ 0.25
CAPN1-214ENST00000528165 WWC3Q9ULE0 1092 aa16.64■□□□□ 0.25
CAPN1-214ENST00000528165 DENND2AQ9ULE3 1009 aa16.64■□□□□ 0.25
CAPN1-214ENST00000528165 ANKRD65E5RJM6 399 aa16.64■□□□□ 0.25
CAPN1-214ENST00000528165 RANBP6O60518 1105 aaKnown RBP16.64■□□□□ 0.25
CAPN1-214ENST00000528165 CIAO1O76071 339 aa16.64■□□□□ 0.25
CAPN1-214ENST00000528165 SLC26A6Q9BXS9 759 aa16.64■□□□□ 0.25
CAPN1-214ENST00000528165 VIPAS39Q9H9C1 493 aa16.64■□□□□ 0.25
CAPN1-214ENST00000528165 MYO6Q9UM54 1294 aa16.64■□□□□ 0.25
CAPN1-214ENST00000528165 SYNRGQ9UMZ2 1314 aa16.63■□□□□ 0.25
CAPN1-214ENST00000528165 PBX1P40424 430 aa16.63■□□□□ 0.25
CAPN1-214ENST00000528165 STX17P56962 302 aa16.63■□□□□ 0.25
CAPN1-214ENST00000528165 SSRP1Q08945 709 aaKnown RBP16.63■□□□□ 0.25
CAPN1-214ENST00000528165 TMTC1Q8IUR5 882 aa16.63■□□□□ 0.25
CAPN1-214ENST00000528165 PLEKHA4Q9H4M7 779 aa16.63■□□□□ 0.25
CAPN1-214ENST00000528165 CWC25Q9NXE8 425 aaPredicted RBP16.63■□□□□ 0.25
CAPN1-214ENST00000528165 DDX60Q8IY21 1712 aaKnown RBP16.63■□□□□ 0.25
CAPN1-214ENST00000528165 BTBD18B2RXH4 712 aa16.63■□□□□ 0.25
CAPN1-214ENST00000528165 NTRK3Q16288 839 aa16.63■□□□□ 0.25
CAPN1-214ENST00000528165 DNAJC21Q5F1R6 531 aaKnown RBP16.63■□□□□ 0.25
CAPN1-214ENST00000528165 EFCAB13Q8IY85 973 aa16.63■□□□□ 0.25
CAPN1-214ENST00000528165 PUS3Q9BZE2 481 aaKnown RBP16.63■□□□□ 0.25
CAPN1-214ENST00000528165 ARFGEF2Q9Y6D5 1785 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 ADAMTS7Q9UKP4 1686 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 LMTK3Q96Q04 1460 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 ARHGAP23Q9P227 1491 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 ACTN4O43707 911 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms