RNA–Protein interactions for RNA: ENST00000527906.5

PSMC3-204, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 3

Gene PSMC3, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-204ENST00000527906 MXD3Q9BW11 206 aa13.06□□□□□ -0.32
PSMC3-204ENST00000527906 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.06□□□□□ -0.32
PSMC3-204ENST00000527906 FZD1Q9UP38 647 aa13.06□□□□□ -0.32
PSMC3-204ENST00000527906 CCDC171Q6TFL3 1326 aa13.06□□□□□ -0.32
PSMC3-204ENST00000527906 GNAT2P19087 354 aa13.05□□□□□ -0.32
PSMC3-204ENST00000527906 DIXDC1Q155Q3 683 aa13.05□□□□□ -0.32
PSMC3-204ENST00000527906 CWC27Q6UX04 472 aaKnown RBP13.05□□□□□ -0.32
PSMC3-204ENST00000527906 WNK4Q96J92 1243 aa13.05□□□□□ -0.32
PSMC3-204ENST00000527906 RIOK1Q9BRS2 568 aaKnown RBP13.05□□□□□ -0.32
PSMC3-204ENST00000527906 NOL10Q9BSC4 688 aaKnown RBP13.05□□□□□ -0.32
PSMC3-204ENST00000527906 DAGLAQ9Y4D2 1042 aa13.05□□□□□ -0.32
PSMC3-204ENST00000527906 MAGEB6P1A0A0J9YX57 407 aa13.04□□□□□ -0.32
PSMC3-204ENST00000527906 SOX1O00570 391 aaPredicted RBP13.04□□□□□ -0.32
PSMC3-204ENST00000527906 GPAA1O43292 621 aa13.04□□□□□ -0.32
PSMC3-204ENST00000527906 CRKP46108 304 aa13.04□□□□□ -0.32
PSMC3-204ENST00000527906 OTUD7BQ6GQQ9 843 aa13.04□□□□□ -0.32
PSMC3-204ENST00000527906 ADGRA1Q86SQ6 560 aa13.04□□□□□ -0.32
PSMC3-204ENST00000527906 CLMNQ96JQ2 1002 aa13.04□□□□□ -0.32
PSMC3-204ENST00000527906 PUS7LQ9H0K6 701 aaKnown RBP13.04□□□□□ -0.32
PSMC3-204ENST00000527906 ZMYM6O95789 1325 aa13.04□□□□□ -0.32
PSMC3-204ENST00000527906 ECM29Q5VYK3 1845 aa13.04□□□□□ -0.32
PSMC3-204ENST00000527906 M0R2C6 588 aa13.03□□□□□ -0.32
PSMC3-204ENST00000527906 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
PSMC3-204ENST00000527906 MBD4O95243 580 aa13.03□□□□□ -0.32
PSMC3-204ENST00000527906 GIMAP6Q6P9H5 292 aa13.03□□□□□ -0.32
PSMC3-204ENST00000527906 KIAA1211Q6ZU35 1233 aa13.03□□□□□ -0.32
PSMC3-204ENST00000527906 LRCH3Q96II8 777 aa13.03□□□□□ -0.32
PSMC3-204ENST00000527906 ZBED3Q96IU2 234 aaPredicted RBP13.03□□□□□ -0.32
PSMC3-204ENST00000527906 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
PSMC3-204ENST00000527906 DSCC1Q9BVC3 393 aa13.03□□□□□ -0.32
PSMC3-204ENST00000527906 BACH2Q9BYV9 841 aa13.03□□□□□ -0.32
PSMC3-204ENST00000527906 CRNKL1Q9BZJ0 848 aaKnown RBP13.03□□□□□ -0.32
PSMC3-204ENST00000527906 FOCADQ5VW36 1801 aa13.03□□□□□ -0.32
PSMC3-204ENST00000527906 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
PSMC3-204ENST00000527906 F8W031 263 aaPredicted RBP13.02□□□□□ -0.33
PSMC3-204ENST00000527906 CHGBP05060 677 aa13.02□□□□□ -0.33
PSMC3-204ENST00000527906 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
PSMC3-204ENST00000527906 BTDP43251 543 aa13.02□□□□□ -0.33
PSMC3-204ENST00000527906 ARHGEF6Q15052 776 aa13.02□□□□□ -0.33
PSMC3-204ENST00000527906 DLGAP5Q15398 846 aa13.02□□□□□ -0.33
PSMC3-204ENST00000527906 MAP3K11Q16584 847 aa13.02□□□□□ -0.33
PSMC3-204ENST00000527906 CFAP100Q494V2 611 aa13.02□□□□□ -0.33
PSMC3-204ENST00000527906 FKBP1CQ5VVH2 108 aa13.02□□□□□ -0.33
PSMC3-204ENST00000527906 APOBEC3HQ6NTF7 200 aaKnown RBP13.02□□□□□ -0.33
PSMC3-204ENST00000527906 ZNF589Q86UQ0 364 aaPredicted RBP13.02□□□□□ -0.33
PSMC3-204ENST00000527906 APOBEC3FQ8IUX4 373 aaKnown RBP13.02□□□□□ -0.33
PSMC3-204ENST00000527906 SH3TC2Q8TF17 1288 aa13.02□□□□□ -0.33
PSMC3-204ENST00000527906 SHISA4Q96DD7 197 aa13.02□□□□□ -0.33
PSMC3-204ENST00000527906 PTPN18Q99952 460 aa13.02□□□□□ -0.33
PSMC3-204ENST00000527906 CDK5RAP2Q96SN8 1893 aa13.02□□□□□ -0.33
PSMC3-204ENST00000527906 RHBDL3P58872 404 aa13.01□□□□□ -0.33
PSMC3-204ENST00000527906 ALX1Q15699 326 aa13.01□□□□□ -0.33
PSMC3-204ENST00000527906 SLFNL1Q499Z3 407 aa13.01□□□□□ -0.33
PSMC3-204ENST00000527906 LCORLQ8N3X6 602 aa13.01□□□□□ -0.33
PSMC3-204ENST00000527906 MIGA1Q8NAN2 632 aa13.01□□□□□ -0.33
PSMC3-204ENST00000527906 SEC62Q99442 399 aaKnown RBP13.01□□□□□ -0.33
PSMC3-204ENST00000527906 IL25Q9H293 177 aa13.01□□□□□ -0.33
PSMC3-204ENST00000527906 ATP8A2Q9NTI2 1148 aa13.01□□□□□ -0.33
PSMC3-204ENST00000527906 AATFQ9NY61 560 aaKnown RBP eCLIP13.01□□□□□ -0.33
PSMC3-204ENST00000527906 COL2A1P02458 1487 aaPredicted RBP13.01□□□□□ -0.33
PSMC3-204ENST00000527906 DDX60LQ5H9U9 1706 aaKnown RBP13.01□□□□□ -0.33
PSMC3-204ENST00000527906 A0A1W2PPC1 479 aa13□□□□□ -0.33
PSMC3-204ENST00000527906 MYO1BO43795 1136 aa13□□□□□ -0.33
PSMC3-204ENST00000527906 GJA5P36382 358 aa13□□□□□ -0.33
PSMC3-204ENST00000527906 COL25A1Q9BXS0 654 aaPredicted RBP13□□□□□ -0.33
PSMC3-204ENST00000527906 IDI2Q9BXS1 227 aa13□□□□□ -0.33
PSMC3-204ENST00000527906 NACAP1Q9BZK3 213 aa13□□□□□ -0.33
PSMC3-204ENST00000527906 LSG1Q9H089 658 aaKnown RBP13□□□□□ -0.33
PSMC3-204ENST00000527906 ARMT1Q9H993 441 aa13□□□□□ -0.33
PSMC3-204ENST00000527906 TAOK2Q9UL54 1235 aa13□□□□□ -0.33
PSMC3-204ENST00000527906 LAMA4Q16363 1823 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 SSC5DA1L4H1 1573 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 TESPA1A2RU30 521 aaPredicted RBP12.99□□□□□ -0.33
PSMC3-204ENST00000527906 GSG1L2A8MUP6 293 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 PATL2C9JE40 543 aaKnown RBP12.99□□□□□ -0.33
PSMC3-204ENST00000527906 FOXP2O15409 715 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 PPP1R12BO60237 982 aaPredicted RBP12.99□□□□□ -0.33
PSMC3-204ENST00000527906 HSPD1P10809 573 aaKnown RBP12.99□□□□□ -0.33
PSMC3-204ENST00000527906 RBM5P52756 815 aaKnown RBP eCLIP12.99□□□□□ -0.33
PSMC3-204ENST00000527906 DYNLL1P63167 89 aaKnown RBP12.99□□□□□ -0.33
PSMC3-204ENST00000527906 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 CDC42EP5Q6NZY7 148 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 CCDC129Q6ZRS4 1044 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 MAP4K1Q92918 833 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 DDRGK1Q96HY6 314 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 HTATIP2Q9BUP3 242 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 DEFB129Q9H1M3 183 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 UPF2Q9HAU5 1272 aaKnown RBP12.99□□□□□ -0.33
PSMC3-204ENST00000527906 ANO2Q9NQ90 1003 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 CTNNA3Q9UI47 895 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 NR2E3Q9Y5X4 410 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
PSMC3-204ENST00000527906 NAV1Q8NEY1 1877 aa12.99□□□□□ -0.33
PSMC3-204ENST00000527906 UNCXA6NJT0 531 aa12.98□□□□□ -0.33
PSMC3-204ENST00000527906 WDHD1O75717 1129 aaPredicted RBP12.98□□□□□ -0.33
PSMC3-204ENST00000527906 TEX11Q8IYF3 940 aa12.98□□□□□ -0.33
PSMC3-204ENST00000527906 SH3RF3Q8TEJ3 882 aaPredicted RBP12.98□□□□□ -0.33
PSMC3-204ENST00000527906 PRMT6Q96LA8 375 aaPredicted RBP12.98□□□□□ -0.33
PSMC3-204ENST00000527906 USP40Q9NVE5 1235 aa12.98□□□□□ -0.33
PSMC3-204ENST00000527906 TMOD2Q9NZR1 351 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms