RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 USP5P45974 858 aa31.93■■■□□ 2.7
TSPAN4-217ENST00000527644 CTU1Q7Z7A3 348 aaKnown RBP31.93■■■□□ 2.7
TSPAN4-217ENST00000527644 FOXP4Q8IVH2 680 aaPredicted RBP31.93■■■□□ 2.7
TSPAN4-217ENST00000527644 FAM43AQ8N2R8 423 aa31.93■■■□□ 2.7
TSPAN4-217ENST00000527644 ABHD8Q96I13 439 aa31.93■■■□□ 2.7
TSPAN4-217ENST00000527644 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.93■■■□□ 2.7
TSPAN4-217ENST00000527644 ZCCHC17Q9NP64 241 aaKnown RBP31.93■■■□□ 2.7
TSPAN4-217ENST00000527644 PALD1Q9ULE6 856 aa31.93■■■□□ 2.7
TSPAN4-217ENST00000527644 ZHX2Q9Y6X8 837 aa31.93■■■□□ 2.7
TSPAN4-217ENST00000527644 TCRBV5S4A2TA0A5A2 114 aa31.92■■■□□ 2.7
TSPAN4-217ENST00000527644 BTBD19C9JJ37 291 aa31.91■■■□□ 2.7
TSPAN4-217ENST00000527644 HDAC1Q13547 482 aaPredicted RBP31.91■■■□□ 2.7
TSPAN4-217ENST00000527644 TAF1CQ15572 869 aaPredicted RBP31.91■■■□□ 2.7
TSPAN4-217ENST00000527644 METTL16Q86W50 562 aaKnown RBP31.91■■■□□ 2.7
TSPAN4-217ENST00000527644 ZFYVE28Q9HCC9 887 aa31.91■■■□□ 2.7
TSPAN4-217ENST00000527644 SAP30BPQ9UHR5 308 aaKnown RBP31.91■■■□□ 2.7
TSPAN4-217ENST00000527644 CAPN15O75808 1086 aa31.9■■■□□ 2.7
TSPAN4-217ENST00000527644 HLA-DOAP06340 250 aa31.9■■■□□ 2.7
TSPAN4-217ENST00000527644 ADD2P35612 726 aa31.9■■■□□ 2.7
TSPAN4-217ENST00000527644 AFG3L2Q9Y4W6 797 aa31.9■■■□□ 2.7
TSPAN4-217ENST00000527644 DOCK1Q14185 1865 aa31.89■■■□□ 2.69
TSPAN4-217ENST00000527644 CAP2P40123 477 aa31.88■■■□□ 2.69
TSPAN4-217ENST00000527644 CRACR2BQ8N4Y2 399 aaPredicted RBP31.88■■■□□ 2.69
TSPAN4-217ENST00000527644 GCC1Q96CN9 775 aa31.88■■■□□ 2.69
TSPAN4-217ENST00000527644 TRIM34Q9BYJ4 488 aa31.88■■■□□ 2.69
TSPAN4-217ENST00000527644 CRNKL1Q9BZJ0 848 aaKnown RBP31.88■■■□□ 2.69
TSPAN4-217ENST00000527644 ZSCAN25Q6NSZ9 544 aa31.87■■■□□ 2.69
TSPAN4-217ENST00000527644 ANKRD23Q86SG2 305 aa31.87■■■□□ 2.69
TSPAN4-217ENST00000527644 TTC41PQ6P2S7 1318 aa31.86■■■□□ 2.69
TSPAN4-217ENST00000527644 UBE3CQ15386 1083 aa31.86■■■□□ 2.69
TSPAN4-217ENST00000527644 ZBTB47Q9UFB7 747 aaPredicted RBP31.86■■■□□ 2.69
TSPAN4-217ENST00000527644 SUPT16HQ9Y5B9 1047 aaKnown RBP31.86■■■□□ 2.69
TSPAN4-217ENST00000527644 SIPA1L1O43166 1804 aa31.86■■■□□ 2.69
TSPAN4-217ENST00000527644 MOGSQ13724 837 aa31.85■■■□□ 2.69
TSPAN4-217ENST00000527644 RRP1BQ14684 758 aaKnown RBP31.85■■■□□ 2.69
TSPAN4-217ENST00000527644 PKN2Q16513 984 aaKnown RBP31.85■■■□□ 2.69
TSPAN4-217ENST00000527644 TTC6Q86TZ1 520 aa31.85■■■□□ 2.69
TSPAN4-217ENST00000527644 DNAJC18Q9H819 358 aa31.85■■■□□ 2.69
TSPAN4-217ENST00000527644 A0A0G2JLL6 359 aaPredicted RBP31.84■■■□□ 2.69
TSPAN4-217ENST00000527644 TSHZ3Q63HK5 1081 aa31.84■■■□□ 2.69
TSPAN4-217ENST00000527644 FASTKD5Q7L8L6 764 aaKnown RBP31.84■■■□□ 2.69
TSPAN4-217ENST00000527644 PRRT2Q7Z6L0 340 aaPredicted RBP31.84■■■□□ 2.69
TSPAN4-217ENST00000527644 TBC1D2Q9BYX2 928 aa31.84■■■□□ 2.69
TSPAN4-217ENST00000527644 MYH1P12882 1939 aa31.84■■■□□ 2.69
TSPAN4-217ENST00000527644 ERC2O15083 957 aa31.83■■■□□ 2.69
TSPAN4-217ENST00000527644 SP3Q02447 781 aa31.83■■■□□ 2.69
TSPAN4-217ENST00000527644 ANKRD45Q5TZF3 282 aa31.83■■■□□ 2.69
TSPAN4-217ENST00000527644 LCORLQ8N3X6 602 aa31.83■■■□□ 2.69
TSPAN4-217ENST00000527644 ERO1AQ96HE7 468 aa31.83■■■□□ 2.69
TSPAN4-217ENST00000527644 EHD4Q9H223 541 aa31.83■■■□□ 2.69
TSPAN4-217ENST00000527644 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.83■■■□□ 2.69
TSPAN4-217ENST00000527644 PDHXO00330 501 aa31.82■■■□□ 2.68
TSPAN4-217ENST00000527644 TLR2O60603 784 aa31.82■■■□□ 2.68
TSPAN4-217ENST00000527644 SLC4A8Q2Y0W8 1093 aa31.82■■■□□ 2.68
TSPAN4-217ENST00000527644 SLFNL1Q499Z3 407 aa31.82■■■□□ 2.68
TSPAN4-217ENST00000527644 EXOC6Q8TAG9 804 aa31.82■■■□□ 2.68
TSPAN4-217ENST00000527644 GINM1Q9NU53 330 aa31.82■■■□□ 2.68
TSPAN4-217ENST00000527644 SERPINB13Q9UIV8 391 aa31.82■■■□□ 2.68
TSPAN4-217ENST00000527644 TRIM75PA6NK02 468 aa31.81■■■□□ 2.68
TSPAN4-217ENST00000527644 USP17L5A8MUK1 530 aa31.81■■■□□ 2.68
TSPAN4-217ENST00000527644 CCDC84Q86UT8 332 aaPredicted RBP31.81■■■□□ 2.68
TSPAN4-217ENST00000527644 KBTBD3Q8NAB2 608 aa31.81■■■□□ 2.68
TSPAN4-217ENST00000527644 RWDD1Q9H446 243 aaPredicted RBP31.81■■■□□ 2.68
TSPAN4-217ENST00000527644 ARMT1Q9H993 441 aa31.81■■■□□ 2.68
TSPAN4-217ENST00000527644 PHIPQ8WWQ0 1821 aa31.81■■■□□ 2.68
TSPAN4-217ENST00000527644 MBD4O95243 580 aa31.8■■■□□ 2.68
TSPAN4-217ENST00000527644 ASNSP08243 561 aa31.8■■■□□ 2.68
TSPAN4-217ENST00000527644 GPAT2Q6NUI2 795 aa31.8■■■□□ 2.68
TSPAN4-217ENST00000527644 OTUD7AQ8TE49 926 aaPredicted RBP31.8■■■□□ 2.68
TSPAN4-217ENST00000527644 MYH7P12883 1935 aa31.8■■■□□ 2.68
TSPAN4-217ENST00000527644 GLRX3O76003 335 aaKnown RBP31.79■■■□□ 2.68
TSPAN4-217ENST00000527644 CHGBP05060 677 aa31.79■■■□□ 2.68
TSPAN4-217ENST00000527644 POLR3DP05423 398 aaPredicted RBP31.79■■■□□ 2.68
TSPAN4-217ENST00000527644 MX1P20591 662 aa31.79■■■□□ 2.68
TSPAN4-217ENST00000527644 ZNF280CQ8ND82 737 aa31.79■■■□□ 2.68
TSPAN4-217ENST00000527644 SDR42E1Q8WUS8 393 aa31.79■■■□□ 2.68
TSPAN4-217ENST00000527644 AS3MTQ9HBK9 375 aa31.79■■■□□ 2.68
TSPAN4-217ENST00000527644 DCP1AQ9NPI6 582 aaPredicted RBP31.79■■■□□ 2.68
TSPAN4-217ENST00000527644 MCM9Q9NXL9 1143 aa31.79■■■□□ 2.68
TSPAN4-217ENST00000527644 ATAD5Q96QE3 1844 aa31.78■■■□□ 2.68
TSPAN4-217ENST00000527644 SPP2Q13103 211 aa31.78■■■□□ 2.68
TSPAN4-217ENST00000527644 TATDN1Q6P1N9 297 aa31.78■■■□□ 2.68
TSPAN4-217ENST00000527644 GADL1Q6ZQY3 521 aa31.78■■■□□ 2.68
TSPAN4-217ENST00000527644 PI4K2BQ8TCG2 481 aa31.78■■■□□ 2.68
TSPAN4-217ENST00000527644 ATP8A2Q9NTI2 1148 aa31.78■■■□□ 2.68
TSPAN4-217ENST00000527644 PLCD1P51178 756 aa31.77■■■□□ 2.68
TSPAN4-217ENST00000527644 CD99L2Q8TCZ2 262 aa31.77■■■□□ 2.68
TSPAN4-217ENST00000527644 SLC45A1Q9Y2W3 748 aa31.77■■■□□ 2.68
TSPAN4-217ENST00000527644 CCDC85CA6NKD9 419 aa31.76■■■□□ 2.67
TSPAN4-217ENST00000527644 PARK7Q99497 189 aaKnown RBP31.76■■■□□ 2.67
TSPAN4-217ENST00000527644 WDR18Q9BV38 432 aa31.76■■■□□ 2.67
TSPAN4-217ENST00000527644 PUS7LQ9H0K6 701 aaKnown RBP31.76■■■□□ 2.67
TSPAN4-217ENST00000527644 TRIM17Q9Y577 477 aa31.76■■■□□ 2.67
TSPAN4-217ENST00000527644 SALL3Q9BXA9 1300 aa31.75■■■□□ 2.67
TSPAN4-217ENST00000527644 PTPRFP10586 1907 aa31.75■■■□□ 2.67
TSPAN4-217ENST00000527644 GDF11O95390 407 aa31.75■■■□□ 2.67
TSPAN4-217ENST00000527644 ZFYP08048 801 aaPredicted RBP31.75■■■□□ 2.67
TSPAN4-217ENST00000527644 JAG1P78504 1218 aa31.75■■■□□ 2.67
TSPAN4-217ENST00000527644 LRRFIP1Q32MZ4 808 aaKnown RBP31.75■■■□□ 2.67
TSPAN4-217ENST00000527644 FBXO46Q6PJ61 603 aaPredicted RBP31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms