RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 AKNAD1Q5T1N1 836 aa22.15■■□□□ 1.14
SMPD1-203ENST00000527275 OSBPL5Q9H0X9 879 aaPredicted RBP22.15■■□□□ 1.14
SMPD1-203ENST00000527275 AMOTL1Q8IY63 956 aa22.14■■□□□ 1.13
SMPD1-203ENST00000527275 ALDH8A1Q9H2A2 487 aaPredicted RBP22.14■■□□□ 1.13
SMPD1-203ENST00000527275 TMOD2Q9NZR1 351 aa22.14■■□□□ 1.13
SMPD1-203ENST00000527275 MYH1P12882 1939 aa22.14■■□□□ 1.13
SMPD1-203ENST00000527275 KIF4BQ2VIQ3 1234 aa22.14■■□□□ 1.13
SMPD1-203ENST00000527275 MFSD6Q6ZSS7 791 aa22.14■■□□□ 1.13
SMPD1-203ENST00000527275 ZDHHC9Q9Y397 364 aa22.14■■□□□ 1.13
SMPD1-203ENST00000527275 TCP10L2B9ZVM9 353 aa22.13■■□□□ 1.13
SMPD1-203ENST00000527275 GSE1Q14687 1217 aa22.13■■□□□ 1.13
SMPD1-203ENST00000527275 VEZTQ9HBM0 779 aa22.13■■□□□ 1.13
SMPD1-203ENST00000527275 SH2B1Q9NRF2 756 aaPredicted RBP22.13■■□□□ 1.13
SMPD1-203ENST00000527275 NEDD4P46934 1319 aa22.13■■□□□ 1.13
SMPD1-203ENST00000527275 DDX60LQ5H9U9 1706 aaKnown RBP22.13■■□□□ 1.13
SMPD1-203ENST00000527275 NPM3O75607 178 aaKnown RBP22.12■■□□□ 1.13
SMPD1-203ENST00000527275 ANKRD1Q15327 319 aa22.12■■□□□ 1.13
SMPD1-203ENST00000527275 NKX2-3Q8TAU0 364 aa22.12■■□□□ 1.13
SMPD1-203ENST00000527275 STAG1Q8WVM7 1258 aa22.12■■□□□ 1.13
SMPD1-203ENST00000527275 TCEANC2Q96MN5 208 aa22.12■■□□□ 1.13
SMPD1-203ENST00000527275 GLTPD2A6NH11 291 aa22.12■■□□□ 1.13
SMPD1-203ENST00000527275 BAG4O95429 457 aaKnown RBP22.12■■□□□ 1.13
SMPD1-203ENST00000527275 TRDNQ13061 729 aa22.12■■□□□ 1.13
SMPD1-203ENST00000527275 NCOA7Q8NI08 942 aa22.12■■□□□ 1.13
SMPD1-203ENST00000527275 TRPM4Q8TD43 1214 aa22.12■■□□□ 1.13
SMPD1-203ENST00000527275 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.12■■□□□ 1.13
SMPD1-203ENST00000527275 ASTN2O75129 1339 aaPredicted RBP22.11■■□□□ 1.13
SMPD1-203ENST00000527275 LARGE1O95461 756 aa22.11■■□□□ 1.13
SMPD1-203ENST00000527275 LMOD1P29536 600 aaPredicted RBP22.11■■□□□ 1.13
SMPD1-203ENST00000527275 DYNLL2Q96FJ2 89 aa22.11■■□□□ 1.13
SMPD1-203ENST00000527275 LAMB1P07942 1786 aa22.11■■□□□ 1.13
SMPD1-203ENST00000527275 B4E1Z4 1266 aa22.11■■□□□ 1.13
SMPD1-203ENST00000527275 PRDM1O75626 825 aa22.11■■□□□ 1.13
SMPD1-203ENST00000527275 HMGB1P09429 215 aaKnown RBP22.11■■□□□ 1.13
SMPD1-203ENST00000527275 RALYLQ86SE5 291 aaKnown RBP22.11■■□□□ 1.13
SMPD1-203ENST00000527275 RNF41Q9H4P4 317 aaPredicted RBP22.11■■□□□ 1.13
SMPD1-203ENST00000527275 TOMM22Q9NS69 142 aa22.11■■□□□ 1.13
SMPD1-203ENST00000527275 DDTLA6NHG4 134 aaPredicted RBP22.1■■□□□ 1.13
SMPD1-203ENST00000527275 TRAK2O60296 914 aa22.1■■□□□ 1.13
SMPD1-203ENST00000527275 ENTPD3O75355 529 aa22.1■■□□□ 1.13
SMPD1-203ENST00000527275 ME3Q16798 604 aa22.1■■□□□ 1.13
SMPD1-203ENST00000527275 RRP12Q5JTH9 1297 aaKnown RBP22.1■■□□□ 1.13
SMPD1-203ENST00000527275 SH3BP5LQ7L8J4 393 aa22.1■■□□□ 1.13
SMPD1-203ENST00000527275 CHST3Q7LGC8 479 aa22.1■■□□□ 1.13
SMPD1-203ENST00000527275 TTC6Q86TZ1 520 aa22.1■■□□□ 1.13
SMPD1-203ENST00000527275 ZSCAN29Q8IWY8 852 aaPredicted RBP22.1■■□□□ 1.13
SMPD1-203ENST00000527275 L3MBTL3Q96JM7 780 aaPredicted RBP22.1■■□□□ 1.13
SMPD1-203ENST00000527275 TPCN1Q9ULQ1 816 aa22.1■■□□□ 1.13
SMPD1-203ENST00000527275 SCAF8Q9UPN6 1271 aaKnown RBP22.1■■□□□ 1.13
SMPD1-203ENST00000527275 DCAF8L1A6NGE4 600 aa22.09■■□□□ 1.13
SMPD1-203ENST00000527275 SLC3A2P08195 630 aaKnown RBP22.09■■□□□ 1.13
SMPD1-203ENST00000527275 FGRP09769 529 aa22.09■■□□□ 1.13
SMPD1-203ENST00000527275 HIRAP54198 1017 aaPredicted RBP22.09■■□□□ 1.13
SMPD1-203ENST00000527275 FKBP1CQ5VVH2 108 aa22.09■■□□□ 1.13
SMPD1-203ENST00000527275 DHX32Q7L7V1 743 aaKnown RBP22.09■■□□□ 1.13
SMPD1-203ENST00000527275 TOB2Q14106 344 aaPredicted RBP22.09■■□□□ 1.13
SMPD1-203ENST00000527275 CCDC83Q8IWF9 413 aa22.09■■□□□ 1.13
SMPD1-203ENST00000527275 MB21D2Q8IYB1 491 aaPredicted RBP22.09■■□□□ 1.13
SMPD1-203ENST00000527275 SLC44A5Q8NCS7 719 aa22.09■■□□□ 1.13
SMPD1-203ENST00000527275 CNNM2Q9H8M5 875 aa22.09■■□□□ 1.13
SMPD1-203ENST00000527275 ROBO3Q96MS0 1386 aa22.09■■□□□ 1.13
SMPD1-203ENST00000527275 GOLGA6L22H0YM25 854 aa22.08■■□□□ 1.13
SMPD1-203ENST00000527275 BRD1O95696 1058 aa22.08■■□□□ 1.13
SMPD1-203ENST00000527275 PTMSP20962 102 aa22.08■■□□□ 1.13
SMPD1-203ENST00000527275 DHX36Q9H2U1 1008 aaKnown RBP22.08■■□□□ 1.13
SMPD1-203ENST00000527275 HACL1Q9UJ83 578 aa22.08■■□□□ 1.13
SMPD1-203ENST00000527275 CNTNAP1P78357 1384 aa22.08■■□□□ 1.13
SMPD1-203ENST00000527275 KDM4AO75164 1064 aa22.08■■□□□ 1.12
SMPD1-203ENST00000527275 PDE4BQ07343 736 aa22.08■■□□□ 1.12
SMPD1-203ENST00000527275 LRRC2Q9BYS8 371 aa22.08■■□□□ 1.12
SMPD1-203ENST00000527275 KRT23Q9C075 422 aa22.08■■□□□ 1.12
SMPD1-203ENST00000527275 ADARB2Q9NS39 739 aaKnown RBP22.08■■□□□ 1.12
SMPD1-203ENST00000527275 ZSWIM5Q9P217 1185 aa22.08■■□□□ 1.12
SMPD1-203ENST00000527275 SMC3Q9UQE7 1217 aa22.08■■□□□ 1.12
SMPD1-203ENST00000527275 PCP11498 1178 aaKnown RBP22.07■■□□□ 1.12
SMPD1-203ENST00000527275 EXOSC10Q01780 885 aaKnown RBP22.07■■□□□ 1.12
SMPD1-203ENST00000527275 FAM151AQ8WW52 585 aa22.07■■□□□ 1.12
SMPD1-203ENST00000527275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.07■■□□□ 1.12
SMPD1-203ENST00000527275 MCM5P33992 734 aa22.06■■□□□ 1.12
SMPD1-203ENST00000527275 TMEM39BQ9GZU3 492 aa22.06■■□□□ 1.12
SMPD1-203ENST00000527275 PI4KBQ9UBF8 816 aa22.06■■□□□ 1.12
SMPD1-203ENST00000527275 SERPINB13Q9UIV8 391 aa22.06■■□□□ 1.12
SMPD1-203ENST00000527275 HLA-DOAP06340 250 aa22.06■■□□□ 1.12
SMPD1-203ENST00000527275 SLURP2P0DP57 97 aa22.06■■□□□ 1.12
SMPD1-203ENST00000527275 ANTXR2P58335 489 aa22.06■■□□□ 1.12
SMPD1-203ENST00000527275 GABPAQ06546 454 aa22.06■■□□□ 1.12
SMPD1-203ENST00000527275 C16orf86Q6ZW13 317 aa22.06■■□□□ 1.12
SMPD1-203ENST00000527275 CYB5R4Q7L1T6 521 aa22.06■■□□□ 1.12
SMPD1-203ENST00000527275 FAM83AQ86UY5 434 aa22.06■■□□□ 1.12
SMPD1-203ENST00000527275 ATRNL1Q5VV63 1379 aa22.06■■□□□ 1.12
SMPD1-203ENST00000527275 ORC4O43929 436 aa22.05■■□□□ 1.12
SMPD1-203ENST00000527275 RANBP6O60518 1105 aaKnown RBP22.05■■□□□ 1.12
SMPD1-203ENST00000527275 ANGEL2Q5VTE6 544 aaKnown RBP22.05■■□□□ 1.12
SMPD1-203ENST00000527275 FOXD4L5Q5VV16 416 aaPredicted RBP22.05■■□□□ 1.12
SMPD1-203ENST00000527275 Q6ZUG5 572 aa22.05■■□□□ 1.12
SMPD1-203ENST00000527275 NECAB1Q8N987 351 aa22.05■■□□□ 1.12
SMPD1-203ENST00000527275 FOXD4L4Q8WXT5 416 aaPredicted RBP22.05■■□□□ 1.12
SMPD1-203ENST00000527275 MKNK2Q9HBH9 465 aa22.05■■□□□ 1.12
SMPD1-203ENST00000527275 CDK8P49336 464 aa22.05■■□□□ 1.12
SMPD1-203ENST00000527275 RASA3Q14644 834 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms