RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 BTDP43251 543 aa18.9■□□□□ 0.62
SNRNP35-204ENST00000527158 FAM173BQ6P4H8 233 aa18.9■□□□□ 0.62
SNRNP35-204ENST00000527158 CCDC144CPQ8IYA2 1237 aa18.9■□□□□ 0.62
SNRNP35-204ENST00000527158 FBXW7Q969H0 707 aa18.9■□□□□ 0.62
SNRNP35-204ENST00000527158 ZSCAN10Q96SZ4 725 aaPredicted RBP18.9■□□□□ 0.62
SNRNP35-204ENST00000527158 MYL10Q9BUA6 226 aa18.9■□□□□ 0.62
SNRNP35-204ENST00000527158 TNKSO95271 1327 aa18.9■□□□□ 0.62
SNRNP35-204ENST00000527158 PRDM1O75626 825 aa18.89■□□□□ 0.62
SNRNP35-204ENST00000527158 CDC27P30260 824 aa18.89■□□□□ 0.62
SNRNP35-204ENST00000527158 RCAN1P53805 252 aa18.89■□□□□ 0.62
SNRNP35-204ENST00000527158 DEFB132Q7Z7B7 95 aa18.89■□□□□ 0.62
SNRNP35-204ENST00000527158 MKRN1Q9UHC7 482 aaKnown RBP18.89■□□□□ 0.62
SNRNP35-204ENST00000527158 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.89■□□□□ 0.62
SNRNP35-204ENST00000527158 BAZ2AQ9UIF9 1905 aaKnown RBP18.89■□□□□ 0.61
SNRNP35-204ENST00000527158 CCDC196A0A1B0GTZ2 297 aa18.89■□□□□ 0.61
SNRNP35-204ENST00000527158 USP17L8P0C7I0 530 aa18.89■□□□□ 0.61
SNRNP35-204ENST00000527158 NT5C2P49902 561 aa18.89■□□□□ 0.61
SNRNP35-204ENST00000527158 RGS22Q8NE09 1264 aa18.89■□□□□ 0.61
SNRNP35-204ENST00000527158 TGFBRAP1Q8WUH2 860 aa18.89■□□□□ 0.61
SNRNP35-204ENST00000527158 RBM27Q9P2N5 1060 aaKnown RBP18.89■□□□□ 0.61
SNRNP35-204ENST00000527158 CFAP45Q9UL16 551 aa18.89■□□□□ 0.61
SNRNP35-204ENST00000527158 QSER1Q2KHR3 1735 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 CYP2D6P10635 497 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 CHRNA5P30532 468 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 IARSP41252 1262 aaKnown RBP18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 SEC23AQ15436 765 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 DOK7Q18PE1 504 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 C12orf60Q5U649 245 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 ELP1O95163 1332 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 NID2Q14112 1375 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 TCHHQ07283 1943 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 GUCY1B3Q02153 619 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 RTN1Q16799 776 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 ZNF654Q8IZM8 581 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 FBXO18Q8NFZ0 1043 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 TMEM63CQ9P1W3 806 aa18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 TFIP11Q9UBB9 837 aaKnown RBP18.88■□□□□ 0.61
SNRNP35-204ENST00000527158 IFIT1BQ5T764 474 aaKnown RBP18.87■□□□□ 0.61
SNRNP35-204ENST00000527158 SPATA32Q96LK8 384 aa18.87■□□□□ 0.61
SNRNP35-204ENST00000527158 FAM217BQ9NTX9 383 aaPredicted RBP18.87■□□□□ 0.61
SNRNP35-204ENST00000527158 SSRP1Q08945 709 aaKnown RBP18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 PPP2R5BQ15173 497 aa18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 NTRK3Q16288 839 aa18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 PODNQ7Z5L7 613 aa18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 ZSCAN30Q86W11 494 aa18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 TEX11Q8IYF3 940 aa18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 ENAHQ8N8S7 591 aaPredicted RBP18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 GAKO14976 1311 aa18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 POLR3DP05423 398 aaPredicted RBP18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 ATL3Q6DD88 541 aa18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 TTC6Q86TZ1 520 aa18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 KLHL34Q8N239 644 aa18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 FANCBQ8NB91 859 aa18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 NUP133Q8WUM0 1156 aa18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 PHKBQ93100 1093 aa18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 NAP1L5Q96NT1 182 aaPredicted RBP18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 ALG1Q9BT22 464 aa18.86■□□□□ 0.61
SNRNP35-204ENST00000527158 TSPY2A6NKD2 308 aa18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 IFNAR1P17181 557 aa18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 EVX2Q03828 476 aa18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 CATIPQ7Z7H3 387 aa18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 MAPKAPK5Q8IW41 473 aa18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 WASF1Q92558 559 aa18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 ZNF396Q96N95 335 aaPredicted RBP18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 ZNF219Q9P2Y4 722 aaPredicted RBP18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 MYH2Q9UKX2 1941 aa18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 GOLGA6L4A6NEF3 574 aa18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 TPRNQ4KMQ1 711 aa18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 CC2D2BQ6DHV5 1058 aa18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 TRIM22Q8IYM9 498 aa18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 SLC16A10Q8TF71 515 aa18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 STK36Q9NRP7 1315 aa18.85■□□□□ 0.61
SNRNP35-204ENST00000527158 CALM1P0DP23 149 aa18.84■□□□□ 0.61
SNRNP35-204ENST00000527158 CALM2P0DP24 149 aa18.84■□□□□ 0.61
SNRNP35-204ENST00000527158 CALM3P0DP25 149 aa18.84■□□□□ 0.61
SNRNP35-204ENST00000527158 SLC4A8Q2Y0W8 1093 aa18.84■□□□□ 0.61
SNRNP35-204ENST00000527158 LRSAM1Q6UWE0 723 aa18.84■□□□□ 0.61
SNRNP35-204ENST00000527158 LEO1Q8WVC0 666 aaPredicted RBP18.84■□□□□ 0.61
SNRNP35-204ENST00000527158 SLC26A6Q9BXS9 759 aa18.84■□□□□ 0.61
SNRNP35-204ENST00000527158 PDGFDQ9GZP0 370 aaPredicted RBP18.84■□□□□ 0.61
SNRNP35-204ENST00000527158 MKNK2Q9HBH9 465 aa18.84■□□□□ 0.61
SNRNP35-204ENST00000527158 ZNF287Q9HBT7 754 aa18.84■□□□□ 0.61
SNRNP35-204ENST00000527158 TTF2Q9UNY4 1162 aaKnown RBP18.84■□□□□ 0.61
SNRNP35-204ENST00000527158 LAMB1P07942 1786 aa18.84■□□□□ 0.61
SNRNP35-204ENST00000527158 F8W031 263 aaPredicted RBP18.83■□□□□ 0.61
SNRNP35-204ENST00000527158 FMNL1O95466 1100 aaPredicted RBP18.83■□□□□ 0.61
SNRNP35-204ENST00000527158 TRIM29Q14134 588 aa18.83■□□□□ 0.61
SNRNP35-204ENST00000527158 FAM47AQ5JRC9 791 aa18.83■□□□□ 0.61
SNRNP35-204ENST00000527158 OTUD7BQ6GQQ9 843 aa18.83■□□□□ 0.61
SNRNP35-204ENST00000527158 ROBO3Q96MS0 1386 aa18.83■□□□□ 0.6
SNRNP35-204ENST00000527158 RHBDL3P58872 404 aa18.83■□□□□ 0.6
SNRNP35-204ENST00000527158 CERS5Q8N5B7 392 aa18.83■□□□□ 0.6
SNRNP35-204ENST00000527158 DBNDD1Q9H9R9 158 aa18.83■□□□□ 0.6
SNRNP35-204ENST00000527158 SAP30BPQ9UHR5 308 aaKnown RBP18.83■□□□□ 0.6
SNRNP35-204ENST00000527158 DAGLAQ9Y4D2 1042 aa18.83■□□□□ 0.6
SNRNP35-204ENST00000527158 BRAPQ7Z569 592 aa18.82■□□□□ 0.6
SNRNP35-204ENST00000527158 C7orf43Q8WVR3 580 aa18.82■□□□□ 0.6
SNRNP35-204ENST00000527158 FLT1P17948 1338 aa18.82■□□□□ 0.6
SNRNP35-204ENST00000527158 SYCE3A1L190 88 aa18.82■□□□□ 0.6
SNRNP35-204ENST00000527158 MSNP26038 577 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms