RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 INCENPQ9NQS7 918 aa12.91□□□□□ -0.34
NEDD8-205ENST00000527046 PI4KBQ9UBF8 816 aa12.91□□□□□ -0.34
NEDD8-205ENST00000527046 RAD50Q92878 1312 aa12.9□□□□□ -0.34
NEDD8-205ENST00000527046 INPP5BP32019 993 aa12.9□□□□□ -0.34
NEDD8-205ENST00000527046 SHMT1P34896 483 aa12.9□□□□□ -0.34
NEDD8-205ENST00000527046 APLP1P51693 650 aa12.9□□□□□ -0.34
NEDD8-205ENST00000527046 HTRA3P83110 453 aa12.9□□□□□ -0.34
NEDD8-205ENST00000527046 SHROOM1Q2M3G4 852 aaPredicted RBP12.9□□□□□ -0.34
NEDD8-205ENST00000527046 TATDN1Q6P1N9 297 aa12.9□□□□□ -0.34
NEDD8-205ENST00000527046 SAPCD2Q86UD0 394 aa12.9□□□□□ -0.34
NEDD8-205ENST00000527046 DSCC1Q9BVC3 393 aa12.9□□□□□ -0.34
NEDD8-205ENST00000527046 EHD4Q9H223 541 aa12.9□□□□□ -0.34
NEDD8-205ENST00000527046 GBA2Q9HCG7 927 aaPredicted RBP12.9□□□□□ -0.34
NEDD8-205ENST00000527046 TAF6LQ9Y6J9 622 aa12.9□□□□□ -0.34
NEDD8-205ENST00000527046 OTOFQ9HC10 1997 aa12.89□□□□□ -0.35
NEDD8-205ENST00000527046 TMEM88BA6NKF7 163 aa12.89□□□□□ -0.35
NEDD8-205ENST00000527046 FGRP09769 529 aa12.89□□□□□ -0.35
NEDD8-205ENST00000527046 ZSCAN29Q8IWY8 852 aaPredicted RBP12.89□□□□□ -0.35
NEDD8-205ENST00000527046 SLC44A5Q8NCS7 719 aa12.89□□□□□ -0.35
NEDD8-205ENST00000527046 CLMNQ96JQ2 1002 aa12.89□□□□□ -0.35
NEDD8-205ENST00000527046 ZNF408Q9H9D4 720 aa12.89□□□□□ -0.35
NEDD8-205ENST00000527046 ANAPC4Q9UJX5 808 aa12.89□□□□□ -0.35
NEDD8-205ENST00000527046 TLL2Q9Y6L7 1015 aa12.89□□□□□ -0.35
NEDD8-205ENST00000527046 ZMYM6O95789 1325 aa12.88□□□□□ -0.35
NEDD8-205ENST00000527046 SEC24BO95487 1268 aa12.88□□□□□ -0.35
NEDD8-205ENST00000527046 APPP05067 770 aa12.88□□□□□ -0.35
NEDD8-205ENST00000527046 POLR3DP05423 398 aaPredicted RBP12.88□□□□□ -0.35
NEDD8-205ENST00000527046 FKBP1BP68106 108 aa12.88□□□□□ -0.35
NEDD8-205ENST00000527046 C8orf34Q49A92 452 aa12.88□□□□□ -0.35
NEDD8-205ENST00000527046 TTC6Q86TZ1 520 aa12.88□□□□□ -0.35
NEDD8-205ENST00000527046 RUFY2Q8WXA3 655 aa12.88□□□□□ -0.35
NEDD8-205ENST00000527046 ANGEL1Q9UNK9 670 aaKnown RBP12.88□□□□□ -0.35
NEDD8-205ENST00000527046 ROBO3Q96MS0 1386 aa12.87□□□□□ -0.35
NEDD8-205ENST00000527046 MINDY4BA8MYZ0 360 aa12.87□□□□□ -0.35
NEDD8-205ENST00000527046 GUCY1A2P33402 732 aa12.87□□□□□ -0.35
NEDD8-205ENST00000527046 CDK8P49336 464 aa12.87□□□□□ -0.35
NEDD8-205ENST00000527046 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
NEDD8-205ENST00000527046 CTDSPL2Q05D32 466 aa12.87□□□□□ -0.35
NEDD8-205ENST00000527046 PPARAQ07869 468 aa12.87□□□□□ -0.35
NEDD8-205ENST00000527046 COL9A3Q14050 684 aaPredicted RBP12.87□□□□□ -0.35
NEDD8-205ENST00000527046 NECTIN1Q15223 517 aa12.87□□□□□ -0.35
NEDD8-205ENST00000527046 C16orf86Q6ZW13 317 aa12.87□□□□□ -0.35
NEDD8-205ENST00000527046 ZKSCAN4Q969J2 545 aaPredicted RBP12.87□□□□□ -0.35
NEDD8-205ENST00000527046 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.87□□□□□ -0.35
NEDD8-205ENST00000527046 ZNF341Q9BYN7 854 aa12.87□□□□□ -0.35
NEDD8-205ENST00000527046 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.87□□□□□ -0.35
NEDD8-205ENST00000527046 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.87□□□□□ -0.35
NEDD8-205ENST00000527046 ARPP21Q9UBL0 812 aaPredicted RBP12.87□□□□□ -0.35
NEDD8-205ENST00000527046 HERC5Q9UII4 1024 aaKnown RBP12.87□□□□□ -0.35
NEDD8-205ENST00000527046 SERPINB13Q9UIV8 391 aa12.87□□□□□ -0.35
NEDD8-205ENST00000527046 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
NEDD8-205ENST00000527046 LAMB1P07942 1786 aa12.86□□□□□ -0.35
NEDD8-205ENST00000527046 FAM155AB1AL88 458 aaPredicted RBP12.86□□□□□ -0.35
NEDD8-205ENST00000527046 HSPA6P17066 643 aa12.86□□□□□ -0.35
NEDD8-205ENST00000527046 KCNA4P22459 653 aa12.86□□□□□ -0.35
NEDD8-205ENST00000527046 GJA5P36382 358 aa12.86□□□□□ -0.35
NEDD8-205ENST00000527046 CAP2P40123 477 aa12.86□□□□□ -0.35
NEDD8-205ENST00000527046 MFAP1P55081 439 aaKnown RBP12.86□□□□□ -0.35
NEDD8-205ENST00000527046 SIAH1Q8IUQ4 282 aa12.86□□□□□ -0.35
NEDD8-205ENST00000527046 DNAJC5GQ8N7S2 189 aa12.86□□□□□ -0.35
NEDD8-205ENST00000527046 C2orf69Q8N8R5 385 aa12.86□□□□□ -0.35
NEDD8-205ENST00000527046 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
NEDD8-205ENST00000527046 NAPBQ9H115 298 aa12.86□□□□□ -0.35
NEDD8-205ENST00000527046 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
NEDD8-205ENST00000527046 SNCAIPQ9Y6H5 919 aa12.86□□□□□ -0.35
NEDD8-205ENST00000527046 PHIPQ8WWQ0 1821 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 UNCXA6NJT0 531 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 RASSF10A6NK89 507 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 PPP1R12BO60237 982 aaPredicted RBP12.85□□□□□ -0.35
NEDD8-205ENST00000527046 CTNND1O60716 968 aaKnown RBP12.85□□□□□ -0.35
NEDD8-205ENST00000527046 CYP21A2P08686 494 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 RASA1P20936 1047 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 NF2P35240 595 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 TDO2P48775 406 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 VGLL4Q14135 290 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 NOL9Q5SY16 702 aaKnown RBP12.85□□□□□ -0.35
NEDD8-205ENST00000527046 DCAF15Q66K64 600 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 ARMC9Q7Z3E5 817 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 TBC1D10CQ8IV04 446 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 STK11IPQ8N1F8 1099 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 KCNB2Q92953 911 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 HHIPL1Q96JK4 782 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 ZIC5Q96T25 663 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 NACAP1Q9BZK3 213 aa12.85□□□□□ -0.35
NEDD8-205ENST00000527046 GREB1LQ9C091 1923 aaPredicted RBP12.85□□□□□ -0.35
NEDD8-205ENST00000527046 HLA-DOAP06340 250 aa12.84□□□□□ -0.35
NEDD8-205ENST00000527046 HUNKP57058 714 aa12.84□□□□□ -0.35
NEDD8-205ENST00000527046 HAND2P61296 217 aa12.84□□□□□ -0.35
NEDD8-205ENST00000527046 STOX1Q6ZVD7 989 aa12.84□□□□□ -0.35
NEDD8-205ENST00000527046 CCDC84Q86UT8 332 aaPredicted RBP12.84□□□□□ -0.35
NEDD8-205ENST00000527046 ANKRD13AQ8IZ07 590 aa12.84□□□□□ -0.35
NEDD8-205ENST00000527046 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
NEDD8-205ENST00000527046 HOOK2Q96ED9 719 aa12.84□□□□□ -0.35
NEDD8-205ENST00000527046 WRNIP1Q96S55 665 aa12.84□□□□□ -0.35
NEDD8-205ENST00000527046 USP26Q9BXU7 913 aa12.84□□□□□ -0.35
NEDD8-205ENST00000527046 RBM8AQ9Y5S9 174 aaKnown RBP12.84□□□□□ -0.35
NEDD8-205ENST00000527046 LAMA4Q16363 1823 aa12.83□□□□□ -0.35
NEDD8-205ENST00000527046 ATAD5Q96QE3 1844 aa12.83□□□□□ -0.35
NEDD8-205ENST00000527046 PRDM1O75626 825 aa12.83□□□□□ -0.36
NEDD8-205ENST00000527046 GDF11O95390 407 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms