RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 TNS3Q68CZ2 1445 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 ARHGEF10O15013 1369 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 KDRP35968 1356 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 K7ELQ4 463 aaPredicted RBP8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 FAM13AO94988 1023 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 GCP02774 474 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 SLFN5Q08AF3 891 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 SUZ12Q15022 739 aaKnown RBP8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 GRIK4Q16099 956 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 DUSP27Q5VZP5 1158 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 ZNF438Q7Z4V0 828 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 ARHGEF25Q86VW2 580 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 IP6K1Q92551 441 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 DDX17Q92841 729 aaKnown RBP8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 ARID3AQ99856 593 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 IGSF1Q8N6C5 1336 aa8.03□□□□□ -1.12
ATPAF1-208ENST00000526821 J3QW42 95 aa8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 ZBTB39O15060 712 aa8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 PRKAR2BP31323 418 aa8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 TMPOP42166 694 aaKnown RBP8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 AMPHP49418 695 aa8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 DNM1Q05193 864 aaKnown RBP8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 SF3B2Q13435 895 aaKnown RBP8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 FAM26DQ5JW98 314 aa8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 WDR63Q8IWG1 891 aa8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 FMR1NBQ8N0W7 255 aaPredicted RBP8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 EDEM1Q92611 657 aa8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 MUC3BQ9H195 1237 aa8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 SRA1Q9HD15 236 aaKnown RBP8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 USP21Q9UK80 565 aa8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 CRYBG1Q9Y4K1 1723 aa8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 NHSL1Q5SYE7 1610 aa8.02□□□□□ -1.13
ATPAF1-208ENST00000526821 E9PSI1 815 aa8.01□□□□□ -1.13
ATPAF1-208ENST00000526821 SMNDC1O75940 238 aaKnown RBP eCLIP8.01□□□□□ -1.13
ATPAF1-208ENST00000526821 HMOX1P09601 288 aa8.01□□□□□ -1.13
ATPAF1-208ENST00000526821 MZF1P28698 734 aaPredicted RBP8.01□□□□□ -1.13
ATPAF1-208ENST00000526821 GDF6Q6KF10 455 aaPredicted RBP8.01□□□□□ -1.13
ATPAF1-208ENST00000526821 PHACTR3Q96KR7 559 aa8.01□□□□□ -1.13
ATPAF1-208ENST00000526821 ELP3Q9H9T3 547 aa8.01□□□□□ -1.13
ATPAF1-208ENST00000526821 RRP7AQ9Y3A4 280 aaKnown RBP8.01□□□□□ -1.13
ATPAF1-208ENST00000526821 SUPT16HQ9Y5B9 1047 aaKnown RBP8.01□□□□□ -1.13
ATPAF1-208ENST00000526821 LTN1O94822 1766 aa8.01□□□□□ -1.13
ATPAF1-208ENST00000526821 MAPK8IP3Q9UPT6 1336 aa8.01□□□□□ -1.13
ATPAF1-208ENST00000526821 ABCC6O95255 1503 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 ADAM23O75077 832 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 ABL1P00519 1130 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 MPSTP25325 297 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 USP5P45974 858 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 EIF1AXP47813 144 aaKnown RBP8□□□□□ -1.13
ATPAF1-208ENST00000526821 NFE2L2Q16236 605 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 C8orf34Q49A92 452 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 SULT6B1Q6IMI4 303 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 ATCAYQ86WG3 371 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 NCAPG2Q86XI2 1143 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 FBXO11Q86XK2 927 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 AEBP1Q8IUX7 1158 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 MAP4K3Q8IVH8 894 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 PMEPA1Q969W9 287 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 LENG1Q96BZ8 264 aaPredicted RBP8□□□□□ -1.13
ATPAF1-208ENST00000526821 NCAPD2Q15021 1401 aa8□□□□□ -1.13
ATPAF1-208ENST00000526821 FURINP09958 794 aa7.99□□□□□ -1.13
ATPAF1-208ENST00000526821 RIPK4P57078 832 aa7.99□□□□□ -1.13
ATPAF1-208ENST00000526821 EHHADHQ08426 723 aa7.99□□□□□ -1.13
ATPAF1-208ENST00000526821 GRIK5Q16478 980 aa7.99□□□□□ -1.13
ATPAF1-208ENST00000526821 IL22RA1Q8N6P7 574 aa7.99□□□□□ -1.13
ATPAF1-208ENST00000526821 IL16Q14005 1332 aa7.99□□□□□ -1.13
ATPAF1-208ENST00000526821 CPDO75976 1380 aa7.98□□□□□ -1.13
ATPAF1-208ENST00000526821 COL18A1P39060 1754 aa7.98□□□□□ -1.13
ATPAF1-208ENST00000526821 PDGFAP04085 211 aa7.98□□□□□ -1.13
ATPAF1-208ENST00000526821 FKBP4Q02790 459 aaKnown RBP eCLIP7.98□□□□□ -1.13
ATPAF1-208ENST00000526821 DOC2BQ14184 412 aa7.98□□□□□ -1.13
ATPAF1-208ENST00000526821 XKR5Q6UX68 686 aa7.98□□□□□ -1.13
ATPAF1-208ENST00000526821 TXNRD3Q86VQ6 643 aa7.98□□□□□ -1.13
ATPAF1-208ENST00000526821 AHDC1Q5TGY3 1603 aaPredicted RBP7.98□□□□□ -1.13
ATPAF1-208ENST00000526821 CAMTA1Q9Y6Y1 1673 aa7.98□□□□□ -1.13
ATPAF1-208ENST00000526821 NEFMP07197 916 aa7.97□□□□□ -1.13
ATPAF1-208ENST00000526821 SELPP16109 830 aa7.97□□□□□ -1.13
ATPAF1-208ENST00000526821 CES1P23141 567 aa7.97□□□□□ -1.13
ATPAF1-208ENST00000526821 ADGRE1Q14246 886 aa7.97□□□□□ -1.13
ATPAF1-208ENST00000526821 NBPF6Q5VWK0 638 aa7.97□□□□□ -1.13
ATPAF1-208ENST00000526821 CEP135Q66GS9 1140 aa7.97□□□□□ -1.13
ATPAF1-208ENST00000526821 FAM117BQ6P1L5 589 aa7.97□□□□□ -1.13
ATPAF1-208ENST00000526821 IGF2-ASQ6U949 168 aa7.97□□□□□ -1.13
ATPAF1-208ENST00000526821 NBPF4Q96M43 638 aa7.97□□□□□ -1.13
ATPAF1-208ENST00000526821 RCAN3Q9UKA8 241 aa7.97□□□□□ -1.13
ATPAF1-208ENST00000526821 LMO7Q8WWI1 1683 aa7.97□□□□□ -1.13
ATPAF1-208ENST00000526821 ROBO1Q9Y6N7 1651 aa7.97□□□□□ -1.13
ATPAF1-208ENST00000526821 MBTPS1Q14703 1052 aa7.96□□□□□ -1.14
ATPAF1-208ENST00000526821 ERICH6BQ5W0A0 696 aa7.96□□□□□ -1.14
ATPAF1-208ENST00000526821 PPME1Q9Y570 386 aa7.96□□□□□ -1.14
ATPAF1-208ENST00000526821 ABCA3Q99758 1704 aa7.95□□□□□ -1.14
ATPAF1-208ENST00000526821 KIF4AO95239 1232 aa7.95□□□□□ -1.14
ATPAF1-208ENST00000526821 NEFLP07196 543 aa7.95□□□□□ -1.14
ATPAF1-208ENST00000526821 ZNF853P0CG23 659 aa7.95□□□□□ -1.14
ATPAF1-208ENST00000526821 NPR3P17342 541 aa7.95□□□□□ -1.14
ATPAF1-208ENST00000526821 ZC3H6P61129 1189 aaKnown RBP7.95□□□□□ -1.14
ATPAF1-208ENST00000526821 LMOD3Q0VAK6 560 aa7.95□□□□□ -1.14
ATPAF1-208ENST00000526821 MTMR3Q13615 1198 aa7.95□□□□□ -1.14
ATPAF1-208ENST00000526821 MTHFSDQ2M296 383 aaKnown RBP7.95□□□□□ -1.14
ATPAF1-208ENST00000526821 ANKRD24Q8TF21 1146 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms