RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 SAP30BPQ9UHR5 308 aaKnown RBP20.65■□□□□ 0.9
CCS-203ENST00000526058 PALD1Q9ULE6 856 aa20.65■□□□□ 0.9
CCS-203ENST00000526058 ZHX2Q9Y6X8 837 aa20.65■□□□□ 0.9
CCS-203ENST00000526058 ATAD5Q96QE3 1844 aa20.64■□□□□ 0.9
CCS-203ENST00000526058 MOGSQ13724 837 aa20.64■□□□□ 0.89
CCS-203ENST00000526058 TMED8Q6PL24 325 aaPredicted RBP20.64■□□□□ 0.89
CCS-203ENST00000526058 CCDC84Q86UT8 332 aaPredicted RBP20.64■□□□□ 0.89
CCS-203ENST00000526058 HAUS7Q99871 368 aa20.64■□□□□ 0.89
CCS-203ENST00000526058 RIOK1Q9BRS2 568 aaKnown RBP20.64■□□□□ 0.89
CCS-203ENST00000526058 PI4KBQ9UBF8 816 aa20.64■□□□□ 0.89
CCS-203ENST00000526058 ZNF532Q9HCE3 1301 aa20.63■□□□□ 0.89
CCS-203ENST00000526058 SLC4A8Q2Y0W8 1093 aa20.63■□□□□ 0.89
CCS-203ENST00000526058 ZFYVE28Q9HCC9 887 aa20.63■□□□□ 0.89
CCS-203ENST00000526058 AFG3L2Q9Y4W6 797 aa20.63■□□□□ 0.89
CCS-203ENST00000526058 PTPRFP10586 1907 aa20.63■□□□□ 0.89
CCS-203ENST00000526058 TCRBV5S4A2TA0A5A2 114 aa20.62■□□□□ 0.89
CCS-203ENST00000526058 CCDC85CA6NKD9 419 aa20.62■□□□□ 0.89
CCS-203ENST00000526058 CXCL11O14625 94 aa20.62■□□□□ 0.89
CCS-203ENST00000526058 USP5P45974 858 aa20.62■□□□□ 0.89
CCS-203ENST00000526058 SLFNL1Q499Z3 407 aa20.62■□□□□ 0.89
CCS-203ENST00000526058 CERS3Q8IU89 383 aa20.62■□□□□ 0.89
CCS-203ENST00000526058 HERC5Q9UII4 1024 aaKnown RBP20.62■□□□□ 0.89
CCS-203ENST00000526058 MYH7P12883 1935 aa20.62■□□□□ 0.89
CCS-203ENST00000526058 MAGEB6P1A0A0J9YX57 407 aa20.61■□□□□ 0.89
CCS-203ENST00000526058 CHGBP05060 677 aa20.61■□□□□ 0.89
CCS-203ENST00000526058 TSHZ3Q63HK5 1081 aa20.61■□□□□ 0.89
CCS-203ENST00000526058 DNAJC18Q9H819 358 aa20.61■□□□□ 0.89
CCS-203ENST00000526058 ZCCHC17Q9NP64 241 aaKnown RBP20.61■□□□□ 0.89
CCS-203ENST00000526058 ECHDC1Q9NTX5 307 aa20.61■□□□□ 0.89
CCS-203ENST00000526058 CAP2P40123 477 aa20.6■□□□□ 0.89
CCS-203ENST00000526058 SP3Q02447 781 aa20.6■□□□□ 0.89
CCS-203ENST00000526058 GPAT2Q6NUI2 795 aa20.6■□□□□ 0.89
CCS-203ENST00000526058 ANKRD23Q86SG2 305 aa20.6■□□□□ 0.89
CCS-203ENST00000526058 METTL16Q86W50 562 aaKnown RBP20.6■□□□□ 0.89
CCS-203ENST00000526058 FOXP4Q8IVH2 680 aaPredicted RBP20.6■□□□□ 0.89
CCS-203ENST00000526058 CD99L2Q8TCZ2 262 aa20.6■□□□□ 0.89
CCS-203ENST00000526058 A0A0G2JLL6 359 aaPredicted RBP20.59■□□□□ 0.89
CCS-203ENST00000526058 TRIM75PA6NK02 468 aa20.59■□□□□ 0.89
CCS-203ENST00000526058 PDHXO00330 501 aa20.59■□□□□ 0.89
CCS-203ENST00000526058 ADD2P35612 726 aa20.59■□□□□ 0.89
CCS-203ENST00000526058 CAP1Q01518 475 aa20.59■□□□□ 0.89
CCS-203ENST00000526058 PRRT2Q7Z6L0 340 aaPredicted RBP20.59■□□□□ 0.89
CCS-203ENST00000526058 CRACR2BQ8N4Y2 399 aaPredicted RBP20.59■□□□□ 0.89
CCS-203ENST00000526058 HTTP42858 3142 aa20.58■□□□□ 0.89
CCS-203ENST00000526058 NAV1Q8NEY1 1877 aa20.58■□□□□ 0.89
CCS-203ENST00000526058 TLR2O60603 784 aa20.58■□□□□ 0.89
CCS-203ENST00000526058 HLA-DOAP06340 250 aa20.58■□□□□ 0.89
CCS-203ENST00000526058 JAG1P78504 1218 aa20.58■□□□□ 0.89
CCS-203ENST00000526058 PKN2Q16513 984 aaKnown RBP20.58■□□□□ 0.89
CCS-203ENST00000526058 LCORLQ8N3X6 602 aa20.58■□□□□ 0.89
CCS-203ENST00000526058 ERO1AQ96HE7 468 aa20.58■□□□□ 0.89
CCS-203ENST00000526058 TRIM34Q9BYJ4 488 aa20.58■□□□□ 0.89
CCS-203ENST00000526058 TRIM17Q9Y577 477 aa20.58■□□□□ 0.89
CCS-203ENST00000526058 SHROOM1Q2M3G4 852 aaPredicted RBP20.57■□□□□ 0.88
CCS-203ENST00000526058 DDX60LQ5H9U9 1706 aaKnown RBP20.57■□□□□ 0.88
CCS-203ENST00000526058 GADL1Q6ZQY3 521 aa20.57■□□□□ 0.88
CCS-203ENST00000526058 OTUD7AQ8TE49 926 aaPredicted RBP20.57■□□□□ 0.88
CCS-203ENST00000526058 CRNKL1Q9BZJ0 848 aaKnown RBP20.57■□□□□ 0.88
CCS-203ENST00000526058 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.57■□□□□ 0.884e-7■■■□□ 16.7
CCS-203ENST00000526058 ARMT1Q9H993 441 aa20.57■□□□□ 0.88
CCS-203ENST00000526058 GDF11O95390 407 aa20.56■□□□□ 0.88
CCS-203ENST00000526058 SPP2Q13103 211 aa20.56■□□□□ 0.88
CCS-203ENST00000526058 FASTKD5Q7L8L6 764 aaKnown RBP20.56■□□□□ 0.88
CCS-203ENST00000526058 OTOP1Q7RTM1 612 aa20.56■□□□□ 0.88
CCS-203ENST00000526058 SDR42E1Q8WUS8 393 aa20.56■□□□□ 0.88
CCS-203ENST00000526058 GPATCH3Q96I76 525 aa20.56■□□□□ 0.88
CCS-203ENST00000526058 HPS5Q9UPZ3 1129 aa20.56■□□□□ 0.88
CCS-203ENST00000526058 ZSWIM8A7E2V4 1837 aa20.55■□□□□ 0.88
CCS-203ENST00000526058 PLCD1P51178 756 aa20.55■□□□□ 0.88
CCS-203ENST00000526058 EVX2Q03828 476 aa20.55■□□□□ 0.88
CCS-203ENST00000526058 FBXO46Q6PJ61 603 aaPredicted RBP20.55■□□□□ 0.88
CCS-203ENST00000526058 CENPFP49454 3210 aa20.55■□□□□ 0.88
CCS-203ENST00000526058 USP17L5A8MUK1 530 aa20.54■□□□□ 0.88
CCS-203ENST00000526058 PRKAB2O43741 272 aa20.54■□□□□ 0.88
CCS-203ENST00000526058 MBD4O95243 580 aa20.54■□□□□ 0.88
CCS-203ENST00000526058 CYP2C8P10632 490 aa20.54■□□□□ 0.88
CCS-203ENST00000526058 HDAC1Q13547 482 aaPredicted RBP20.54■□□□□ 0.88
CCS-203ENST00000526058 UBE3CQ15386 1083 aa20.54■□□□□ 0.88
CCS-203ENST00000526058 C17orf99Q6UX52 265 aa20.54■□□□□ 0.88
CCS-203ENST00000526058 TTC6Q86TZ1 520 aa20.54■□□□□ 0.88
CCS-203ENST00000526058 ZNF280CQ8ND82 737 aa20.54■□□□□ 0.88
CCS-203ENST00000526058 EXOC6Q8TAG9 804 aa20.54■□□□□ 0.88
CCS-203ENST00000526058 EFCC1Q9HA90 598 aa20.54■□□□□ 0.88
CCS-203ENST00000526058 DCP1AQ9NPI6 582 aaPredicted RBP20.54■□□□□ 0.88
CCS-203ENST00000526058 CPA4Q9UI42 421 aa20.54■□□□□ 0.88
CCS-203ENST00000526058 SERPINB13Q9UIV8 391 aa20.54■□□□□ 0.88
CCS-203ENST00000526058 ADGRA2Q96PE1 1338 aa20.53■□□□□ 0.88
CCS-203ENST00000526058 BAZ2AQ9UIF9 1905 aaKnown RBP20.53■□□□□ 0.88
CCS-203ENST00000526058 POLR3DP05423 398 aaPredicted RBP20.53■□□□□ 0.88
CCS-203ENST00000526058 ASNSP08243 561 aa20.53■□□□□ 0.88
CCS-203ENST00000526058 ANKRD45Q5TZF3 282 aa20.53■□□□□ 0.88
CCS-203ENST00000526058 PUS7LQ9H0K6 701 aaKnown RBP20.53■□□□□ 0.88
CCS-203ENST00000526058 EHD4Q9H223 541 aa20.53■□□□□ 0.88
CCS-203ENST00000526058 MCM9Q9NXL9 1143 aa20.53■□□□□ 0.88
CCS-203ENST00000526058 SUPT16HQ9Y5B9 1047 aaKnown RBP20.53■□□□□ 0.88
CCS-203ENST00000526058 ECM2O94769 699 aaPredicted RBP20.52■□□□□ 0.88
CCS-203ENST00000526058 TREML2Q5T2D2 321 aa20.52■□□□□ 0.88
CCS-203ENST00000526058 ZSCAN25Q6NSZ9 544 aa20.52■□□□□ 0.88
CCS-203ENST00000526058 TATDN1Q6P1N9 297 aa20.52■□□□□ 0.88
CCS-203ENST00000526058 KBTBD3Q8NAB2 608 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms