RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 CLEC10AQ8IUN9 316 aa6.81□□□□□ -1.32
USP48-211ENST00000526044 C2CD4AQ8NCU7 369 aaPredicted RBP6.81□□□□□ -1.32
USP48-211ENST00000526044 WDR89Q96FK6 387 aaPredicted RBP6.81□□□□□ -1.32
USP48-211ENST00000526044 KCNF1Q9H3M0 494 aa6.81□□□□□ -1.32
USP48-211ENST00000526044 OAS3Q9Y6K5 1087 aaKnown RBP6.81□□□□□ -1.32
USP48-211ENST00000526044 UACAQ9BZF9 1416 aa6.81□□□□□ -1.32
USP48-211ENST00000526044 TRIM37O94972 964 aa6.8□□□□□ -1.32
USP48-211ENST00000526044 INTS5Q6P9B9 1019 aaKnown RBP6.8□□□□□ -1.32
USP48-211ENST00000526044 DYMQ7RTS9 669 aa6.8□□□□□ -1.32
USP48-211ENST00000526044 VPS8Q8N3P4 1428 aa6.8□□□□□ -1.32
USP48-211ENST00000526044 GRIN3AQ8TCU5 1115 aa6.8□□□□□ -1.32
USP48-211ENST00000526044 FAM83CQ9BQN1 747 aa6.8□□□□□ -1.32
USP48-211ENST00000526044 YIPF2Q9BWQ6 316 aa6.8□□□□□ -1.32
USP48-211ENST00000526044 AP4E1Q9UPM8 1137 aa6.8□□□□□ -1.32
USP48-211ENST00000526044 PLB1Q6P1J6 1458 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 RBM47A0AV96 593 aaKnown RBP6.79□□□□□ -1.32
USP48-211ENST00000526044 KIAA1324LA8MWY0 1029 aaPredicted RBP6.79□□□□□ -1.32
USP48-211ENST00000526044 RLBP1P12271 317 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 MAP4P27816 1152 aaKnown RBP6.79□□□□□ -1.32
USP48-211ENST00000526044 RXRBP28702 533 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 ASPAP45381 313 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 ID3Q02535 119 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 SGO2Q562F6 1265 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 TTBK2Q6IQ55 1244 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 BEND4Q6ZU67 534 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 GPBAR1Q8TDU6 330 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 ACSBG1Q96GR2 724 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 NOC4LQ9BVI4 516 aaKnown RBP6.79□□□□□ -1.32
USP48-211ENST00000526044 CACNA2D2Q9NY47 1150 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 PPP1R9AQ9ULJ8 1098 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 CCDC9Q9Y3X0 531 aaKnown RBP6.79□□□□□ -1.32
USP48-211ENST00000526044 ACTL7BQ9Y614 415 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 RAPGEF6Q8TEU7 1601 aa6.79□□□□□ -1.32
USP48-211ENST00000526044 CASKIN1Q8WXD9 1431 aa6.78□□□□□ -1.32
USP48-211ENST00000526044 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.78□□□□□ -1.32
USP48-211ENST00000526044 PLEKHD1A6NEE1 506 aa6.78□□□□□ -1.32
USP48-211ENST00000526044 TMPRSS2O15393 492 aa6.78□□□□□ -1.32
USP48-211ENST00000526044 TGFB1P01137 390 aa6.78□□□□□ -1.32
USP48-211ENST00000526044 RPS26P62854 115 aaKnown RBP6.78□□□□□ -1.32
USP48-211ENST00000526044 CDPF1Q6NVV7 123 aa6.78□□□□□ -1.32
USP48-211ENST00000526044 MPRIPQ6WCQ1 1025 aa6.78□□□□□ -1.32
USP48-211ENST00000526044 TRIM42Q8IWZ5 723 aa6.78□□□□□ -1.32
USP48-211ENST00000526044 FBLIM1Q8WUP2 373 aa6.78□□□□□ -1.32
USP48-211ENST00000526044 GSX1Q9H4S2 264 aaPredicted RBP6.78□□□□□ -1.32
USP48-211ENST00000526044 C7orf69Q9H7B7 122 aa6.78□□□□□ -1.32
USP48-211ENST00000526044 CRIM1Q9NZV1 1036 aa6.78□□□□□ -1.32
USP48-211ENST00000526044 CDK11AQ9UQ88 783 aaPredicted RBP6.78□□□□□ -1.32
USP48-211ENST00000526044 ABCA8O94911 1581 aa6.78□□□□□ -1.32
USP48-211ENST00000526044 FAM95CA0A1B0GW59 222 aa6.77□□□□□ -1.33
USP48-211ENST00000526044 HMX2A2RU54 273 aa6.77□□□□□ -1.33
USP48-211ENST00000526044 LMNB1P20700 586 aa6.77□□□□□ -1.33
USP48-211ENST00000526044 MRPL58Q14197 206 aaKnown RBP6.77□□□□□ -1.33
USP48-211ENST00000526044 RASIP1Q5U651 963 aa6.77□□□□□ -1.33
USP48-211ENST00000526044 ATXN3LQ9H3M9 355 aa6.77□□□□□ -1.33
USP48-211ENST00000526044 FAM105AQ9NUU6 356 aa6.77□□□□□ -1.33
USP48-211ENST00000526044 PCDHGC5Q9Y5F6 944 aa6.77□□□□□ -1.33
USP48-211ENST00000526044 UHRF1BP1LA0JNW5 1464 aa6.77□□□□□ -1.33
USP48-211ENST00000526044 MED26O95402 600 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 LIG3P49916 1009 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 NFKBIBQ15653 356 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 MAP3K11Q16584 847 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 ZC3H12AQ5D1E8 599 aaKnown RBP6.76□□□□□ -1.33
USP48-211ENST00000526044 LCE1DQ5T752 114 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 RNF43Q68DV7 783 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 PAOXQ6QHF9 649 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 AGMOQ6ZNB7 445 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 RGS22Q8NE09 1264 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 EZH1Q92800 747 aaPredicted RBP6.76□□□□□ -1.33
USP48-211ENST00000526044 FANCD2OSQ96PS1 177 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 ACSS3Q9H6R3 686 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 DISC1Q9NRI5 854 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 ATP10BO94823 1461 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 FYCO1Q9BQS8 1478 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 HECW1Q76N89 1606 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 ABCC2Q92887 1545 aa6.76□□□□□ -1.33
USP48-211ENST00000526044 NUP153P49790 1475 aaKnown RBP6.75□□□□□ -1.33
USP48-211ENST00000526044 WNT11O96014 354 aa6.75□□□□□ -1.33
USP48-211ENST00000526044 NFICP08651 508 aa6.75□□□□□ -1.33
USP48-211ENST00000526044 RAB6AP20340 208 aa6.75□□□□□ -1.33
USP48-211ENST00000526044 ERVK-24P63145 666 aa6.75□□□□□ -1.33
USP48-211ENST00000526044 NFIAQ12857 509 aa6.75□□□□□ -1.33
USP48-211ENST00000526044 MAP7Q14244 749 aa6.75□□□□□ -1.33
USP48-211ENST00000526044 PIDD1Q9HB75 910 aa6.75□□□□□ -1.33
USP48-211ENST00000526044 PCDHA4Q9UN74 947 aa6.75□□□□□ -1.33
USP48-211ENST00000526044 ADCY10Q96PN6 1610 aa6.75□□□□□ -1.33
USP48-211ENST00000526044 EPRSP07814 1512 aaKnown RBP6.75□□□□□ -1.33
USP48-211ENST00000526044 PCF11O94913 1555 aaKnown RBP6.74□□□□□ -1.33
USP48-211ENST00000526044 LRRIQ1Q96JM4 1722 aa6.74□□□□□ -1.33
USP48-211ENST00000526044 RELL1Q8IUW5 271 aa6.74□□□□□ -1.33
USP48-211ENST00000526044 RSRP1Q9BUV0 290 aa6.74□□□□□ -1.33
USP48-211ENST00000526044 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
USP48-211ENST00000526044 SEMA6CQ9H3T2 930 aa6.74□□□□□ -1.33
USP48-211ENST00000526044 KDM5BQ9UGL1 1544 aa6.74□□□□□ -1.33
USP48-211ENST00000526044 CCDC18Q5T9S5 1454 aa6.73□□□□□ -1.33
USP48-211ENST00000526044 PTPN11Q06124 597 aaPredicted RBP6.73□□□□□ -1.33
USP48-211ENST00000526044 PWP1Q13610 501 aa6.73□□□□□ -1.33
USP48-211ENST00000526044 TTLL4Q14679 1199 aa6.73□□□□□ -1.33
USP48-211ENST00000526044 RNF214Q8ND24 703 aa6.73□□□□□ -1.33
USP48-211ENST00000526044 DBNDD2Q9BQY9 259 aa6.73□□□□□ -1.33
USP48-211ENST00000526044 PCDHB5Q9Y5E4 795 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms