RNA–Protein interactions for RNA: ENST00000525948.5

PUM1-215, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-215	ENST00000525948	PHF20L1	A8MW92	1017 aa		12.84	□□□□□ -0.35
PUM1-215	ENST00000525948	ALDH1L1	O75891	902 aa		12.84	□□□□□ -0.35
PUM1-215	ENST00000525948	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.84	□□□□□ -0.35
PUM1-215	ENST00000525948	SLURP2	P0DP57	97 aa		12.84	□□□□□ -0.35
PUM1-215	ENST00000525948	PTPRA	P18433	802 aa		12.84	□□□□□ -0.35
PUM1-215	ENST00000525948	PRDX5	P30044	214 aa		12.84	□□□□□ -0.35
PUM1-215	ENST00000525948	TRIM32	Q13049	653 aa		12.84	□□□□□ -0.35
PUM1-215	ENST00000525948	CCDC84	Q86UT8	332 aa	Predicted RBP	12.84	□□□□□ -0.35
PUM1-215	ENST00000525948	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
PUM1-215	ENST00000525948	ANKRD13C	Q8N6S4	541 aa		12.84	□□□□□ -0.35
PUM1-215	ENST00000525948	KLHDC4	Q8TBB5	520 aa		12.84	□□□□□ -0.35
PUM1-215	ENST00000525948	COA7	Q96BR5	231 aa		12.84	□□□□□ -0.35
PUM1-215	ENST00000525948	KIF16B	Q96L93	1317 aa		12.84	□□□□□ -0.35
PUM1-215	ENST00000525948	HMGCR	P04035	888 aa		12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	FGFR2	P21802	821 aa		12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	ATN1	P54259	1190 aa	Predicted RBP	12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	EXOSC9	Q06265	439 aa	Known RBP	12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	FAM110C	Q1W6H9	321 aa		12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	RABL6	Q3YEC7	729 aa	Predicted RBP	12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	SLC4A10	Q6U841	1118 aa		12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	ANKRD44	Q8N8A2	993 aa		12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	UBE2O	Q9C0C9	1292 aa	Known RBP	12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	SRCIN1	Q9C0H9	1055 aa		12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	NBPF3	Q9H094	633 aa		12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	C11orf49	Q9H6J7	331 aa		12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	PICK1	Q9NRD5	415 aa		12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	PFAS	O15067	1338 aa		12.83	□□□□□ -0.36
PUM1-215	ENST00000525948	TRIM75P	A6NK02	468 aa		12.82	□□□□□ -0.36
PUM1-215	ENST00000525948	PUM3	Q15397	648 aa	Known RBP	12.82	□□□□□ -0.36
PUM1-215	ENST00000525948	TREML2	Q5T2D2	321 aa		12.82	□□□□□ -0.36
PUM1-215	ENST00000525948	SH3BP5L	Q7L8J4	393 aa		12.82	□□□□□ -0.36
PUM1-215	ENST00000525948	WDR66	Q8TBY9	1149 aa		12.82	□□□□□ -0.36
PUM1-215	ENST00000525948	GUCD1	Q96NT3	240 aa		12.82	□□□□□ -0.36
PUM1-215	ENST00000525948	USP40	Q9NVE5	1235 aa		12.82	□□□□□ -0.36
PUM1-215	ENST00000525948	AGTPBP1	Q9UPW5	1226 aa		12.82	□□□□□ -0.36
PUM1-215	ENST00000525948	LTBP2	Q14767	1821 aa		12.82	□□□□□ -0.36
PUM1-215	ENST00000525948	UTY	O14607	1347 aa		12.82	□□□□□ -0.36
PUM1-215	ENST00000525948	RPTOR	Q8N122	1335 aa		12.82	□□□□□ -0.36
PUM1-215	ENST00000525948	ZEB1	P37275	1124 aa	Predicted RBP	12.81	□□□□□ -0.36
PUM1-215	ENST00000525948	RGS3	P49796	1198 aa		12.81	□□□□□ -0.36
PUM1-215	ENST00000525948	SLC39A7	Q92504	469 aa		12.81	□□□□□ -0.36
PUM1-215	ENST00000525948	IFIT1	P09914	478 aa	Known RBP	12.8	□□□□□ -0.36
PUM1-215	ENST00000525948	CCDC184	Q52MB2	194 aa		12.8	□□□□□ -0.36
PUM1-215	ENST00000525948	TRIB2	Q92519	343 aa		12.8	□□□□□ -0.36
PUM1-215	ENST00000525948	HMX1	Q9NP08	348 aa	Predicted RBP	12.8	□□□□□ -0.36
PUM1-215	ENST00000525948	OGDHL	Q9ULD0	1010 aa		12.8	□□□□□ -0.36
PUM1-215	ENST00000525948	PRUNE2	Q8WUY3	3088 aa		12.8	□□□□□ -0.36
PUM1-215	ENST00000525948	SIPA1L1	O43166	1804 aa		12.79	□□□□□ -0.36
PUM1-215	ENST00000525948	DDTL	A6NHG4	134 aa	Predicted RBP	12.79	□□□□□ -0.36
PUM1-215	ENST00000525948	C7	P10643	843 aa		12.79	□□□□□ -0.36
PUM1-215	ENST00000525948	SLC5A1	P13866	664 aa		12.79	□□□□□ -0.36
PUM1-215	ENST00000525948	FAM161B	Q96MY7	647 aa		12.79	□□□□□ -0.36
PUM1-215	ENST00000525948	IDI2	Q9BXS1	227 aa		12.79	□□□□□ -0.36
PUM1-215	ENST00000525948	GJD2	Q9UKL4	321 aa		12.79	□□□□□ -0.36
PUM1-215	ENST00000525948	PNMA3	Q9UL41	463 aa		12.79	□□□□□ -0.36
PUM1-215	ENST00000525948	LRRFIP2	Q9Y608	721 aa	Known RBP	12.79	□□□□□ -0.36
PUM1-215	ENST00000525948	DNAH12	Q6ZR08	3092 aa		12.78	□□□□□ -0.36
PUM1-215	ENST00000525948	MUC3A	Q02505	3323 aa		12.78	□□□□□ -0.36
PUM1-215	ENST00000525948	ENTPD3	O75355	529 aa		12.78	□□□□□ -0.36
PUM1-215	ENST00000525948	LDHB	P07195	334 aa	Known RBP	12.78	□□□□□ -0.36
PUM1-215	ENST00000525948	MDM2	Q00987	491 aa	Predicted RBP	12.78	□□□□□ -0.36
PUM1-215	ENST00000525948	MAP3K10	Q02779	954 aa		12.78	□□□□□ -0.36
PUM1-215	ENST00000525948	PDAP1	Q13442	181 aa	Known RBP	12.78	□□□□□ -0.36
PUM1-215	ENST00000525948	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.78	□□□□□ -0.36
PUM1-215	ENST00000525948	DDX4	Q9NQI0	724 aa	Known RBP	12.78	□□□□□ -0.36
PUM1-215	ENST00000525948	FAM196B	A6NMK8	535 aa		12.77	□□□□□ -0.37
PUM1-215	ENST00000525948	CTNND1	O60716	968 aa	Known RBP	12.77	□□□□□ -0.37
PUM1-215	ENST00000525948	COL6A1	P12109	1028 aa		12.77	□□□□□ -0.37
PUM1-215	ENST00000525948	PICALM	Q13492	652 aa		12.77	□□□□□ -0.37
PUM1-215	ENST00000525948	LRRC26	Q2I0M4	334 aa		12.77	□□□□□ -0.37
PUM1-215	ENST00000525948	MAP3K21	Q5TCX8	1036 aa		12.77	□□□□□ -0.37
PUM1-215	ENST00000525948	PROCA1	Q8NCQ7	364 aa	Predicted RBP	12.77	□□□□□ -0.37
PUM1-215	ENST00000525948	LPIN2	Q92539	896 aa		12.77	□□□□□ -0.37
PUM1-215	ENST00000525948	GAK	O14976	1311 aa		12.77	□□□□□ -0.37
PUM1-215	ENST00000525948	SALL1	Q9NSC2	1324 aa		12.77	□□□□□ -0.37
PUM1-215	ENST00000525948	POTEB2	H3BUK9	544 aa		12.76	□□□□□ -0.37
PUM1-215	ENST00000525948	PSEN1	P49768	467 aa		12.76	□□□□□ -0.37
PUM1-215	ENST00000525948	SALL2	Q9Y467	1007 aa	Predicted RBP	12.76	□□□□□ -0.37
PUM1-215	ENST00000525948	EYA2	O00167	538 aa		12.75	□□□□□ -0.37
PUM1-215	ENST00000525948	PEX10	O60683	326 aa		12.75	□□□□□ -0.37
PUM1-215	ENST00000525948	CYP2B6	P20813	491 aa		12.75	□□□□□ -0.37
PUM1-215	ENST00000525948	RFX5	P48382	616 aa	Predicted RBP	12.75	□□□□□ -0.37
PUM1-215	ENST00000525948	GCLC	P48506	637 aa	Predicted RBP	12.75	□□□□□ -0.37
PUM1-215	ENST00000525948	HMGCS2	P54868	508 aa		12.75	□□□□□ -0.37
PUM1-215	ENST00000525948	FAM109B	Q6ICB4	259 aa	Predicted RBP	12.75	□□□□□ -0.37
PUM1-215	ENST00000525948	TTC28	Q96AY4	2481 aa		12.75	□□□□□ -0.37
PUM1-215	ENST00000525948	CDK5RAP2	Q96SN8	1893 aa		12.75	□□□□□ -0.37
PUM1-215	ENST00000525948	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.75	□□□□□ -0.37
PUM1-215	ENST00000525948	RIOK3	O14730	519 aa	Known RBP	12.74	□□□□□ -0.37
PUM1-215	ENST00000525948	BTD	P43251	543 aa		12.74	□□□□□ -0.37
PUM1-215	ENST00000525948	PHKA1	P46020	1223 aa		12.74	□□□□□ -0.37
PUM1-215	ENST00000525948	SPP2	Q13103	211 aa		12.74	□□□□□ -0.37
PUM1-215	ENST00000525948	ATP2B3	Q16720	1220 aa		12.74	□□□□□ -0.37
PUM1-215	ENST00000525948	ATG9A	Q7Z3C6	839 aa		12.74	□□□□□ -0.37
PUM1-215	ENST00000525948	WDR63	Q8IWG1	891 aa		12.74	□□□□□ -0.37
PUM1-215	ENST00000525948	MORF4L1	Q9UBU8	362 aa		12.74	□□□□□ -0.37
PUM1-215	ENST00000525948	METRN	Q9UJH8	293 aa		12.74	□□□□□ -0.37
PUM1-215	ENST00000525948	RLF	Q13129	1914 aa		12.74	□□□□□ -0.37
PUM1-215	ENST00000525948	CCND3	P30281	292 aa	Predicted RBP	12.73	□□□□□ -0.37
PUM1-215	ENST00000525948	CACNB2	Q08289	660 aa	Predicted RBP	12.73	□□□□□ -0.37

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